Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 SNORD90-201ENST00000391145 111 ntBASIC0.74□□□□□ -2.29
SDHAP31040 SNORA40.8-201ENST00000411034 126 ntBASIC0.74□□□□□ -2.29
SDHAP31040 MIR3140-201ENST00000583685 90 ntBASIC0.74□□□□□ -2.29
SDHAP31040 MIR4653-201ENST00000585107 83 ntBASIC0.74□□□□□ -2.29
SDHAP31040 MIR6788-201ENST00000618842 66 ntBASIC0.74□□□□□ -2.29
SDHAP31040 U3.27-201ENST00000391237 200 ntBASIC0.73□□□□□ -2.29
SDHAP31040 AC022709.1-201ENST00000615967 87 ntBASIC0.73□□□□□ -2.29
SDHAP31040 MIR7-2-201ENST00000384970 110 ntBASIC0.72□□□□□ -2.29
SDHAP31040 MIR4698-201ENST00000577795 80 ntBASIC0.72□□□□□ -2.29
SDHAP31040 AL162376.1-201ENST00000624117 175 ntBASIC0.72□□□□□ -2.29
SDHAP31040 MIR548J-201ENST00000408833 112 ntBASIC0.71□□□□□ -2.3
SDHAP31040 AL450471.1-201ENST00000447509 127 ntBASIC0.71□□□□□ -2.3
SDHAP31040 RNA5SP480-201ENST00000516840 109 ntBASIC0.71□□□□□ -2.3
SDHAP31040 MIR4460-201ENST00000577862 86 ntBASIC0.71□□□□□ -2.3
SDHAP31040 MIR3973-201ENST00000579824 107 ntBASIC0.71□□□□□ -2.3
SDHAP31040 RNU6-652P-201ENST00000365488 107 ntBASIC0.7□□□□□ -2.3
SDHAP31040 MIR598-201ENST00000384868 97 ntBASIC0.7□□□□□ -2.3
SDHAP31040 RNU6-1108P-201ENST00000516308 104 ntBASIC0.7□□□□□ -2.3
SDHAP31040 AC073869.9-201ENST00000641610 120 ntBASIC0.7□□□□□ -2.3
SDHAP31040 MIR373-201ENST00000362273 69 ntBASIC0.69□□□□□ -2.3
SDHAP31040 RNU6-161P-201ENST00000363051 106 ntBASIC0.69□□□□□ -2.3
SDHAP31040 SNORD118-201ENST00000363593 134 ntBASIC0.69□□□□□ -2.3
SDHAP31040 SNORD77.2-201ENST00000391045 68 ntBASIC0.69□□□□□ -2.3
SDHAP31040 RNA5SP484-201ENST00000458857 111 ntBASIC0.69□□□□□ -2.3
SDHAP31040 MIR3202-2-201ENST00000635980 79 ntBASIC0.69□□□□□ -2.3
SDHAP31040 MIR1245B-201ENST00000636115 69 ntBASIC0.69□□□□□ -2.3
SDHAP31040 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
SDHAP31040 RNU6-208P-201ENST00000362431 107 ntBASIC0.68□□□□□ -2.3
SDHAP31040 Y_RNA.36-201ENST00000362602 112 ntBASIC0.68□□□□□ -2.3
SDHAP31040 Y_RNA.219-201ENST00000364232 113 ntBASIC0.68□□□□□ -2.3
SDHAP31040 RNU1-141P-201ENST00000364623 158 ntBASIC0.68□□□□□ -2.3
SDHAP31040 Y_RNA.316-201ENST00000365118 111 ntBASIC0.68□□□□□ -2.3
SDHAP31040 RNU6-945P-201ENST00000383947 107 ntBASIC0.68□□□□□ -2.3
SDHAP31040 MIR518A1-201ENST00000385068 85 ntBASIC0.68□□□□□ -2.3
SDHAP31040 RNU6-129P-201ENST00000391022 107 ntBASIC0.68□□□□□ -2.3
SDHAP31040 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.68□□□□□ -2.3
SDHAP31040 AC069271.1-201ENST00000445577 156 ntBASIC0.68□□□□□ -2.3
SDHAP31040 NAMPTP3-201ENST00000569273 224 ntBASIC0.68□□□□□ -2.3
SDHAP31040 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.68□□□□□ -2.3
SDHAP31040 RNU6-624P-201ENST00000363411 107 ntBASIC0.67□□□□□ -2.3
SDHAP31040 SNORD114-26-201ENST00000363543 72 ntBASIC0.67□□□□□ -2.3
SDHAP31040 AC006210.1-201ENST00000424882 111 ntBASIC0.67□□□□□ -2.3
SDHAP31040 AC018659.1-201ENST00000551083 169 ntBASIC0.67□□□□□ -2.3
SDHAP31040 MIR4666B-201ENST00000578142 81 ntBASIC0.67□□□□□ -2.3
SDHAP31040 MIR4752-201ENST00000579672 72 ntBASIC0.67□□□□□ -2.3
SDHAP31040 RNU6-1124P-201ENST00000384169 107 ntBASIC0.66□□□□□ -2.3
SDHAP31040 snoU13.17-201ENST00000458802 104 ntBASIC0.66□□□□□ -2.3
SDHAP31040 RNU4-54P-201ENST00000516428 129 ntBASIC0.66□□□□□ -2.3
SDHAP31040 Y_RNA.313-201ENST00000365095 103 ntBASIC0.65□□□□□ -2.31
SDHAP31040 Y_RNA.540-201ENST00000384638 111 ntBASIC0.65□□□□□ -2.31
SDHAP31040 AC093423.1-201ENST00000440817 142 ntBASIC0.65□□□□□ -2.31
SDHAP31040 Y_RNA.660-201ENST00000516002 120 ntBASIC0.65□□□□□ -2.31
SDHAP31040 MIR5000-201ENST00000577717 103 ntBASIC0.65□□□□□ -2.31
SDHAP31040 MIR548O2-201ENST00000616090 70 ntBASIC0.65□□□□□ -2.31
SDHAP31040 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
SDHAP31040 Y_RNA.264-201ENST00000364665 102 ntBASIC0.64□□□□□ -2.31
SDHAP31040 RNU6V-201ENST00000384105 107 ntBASIC0.64□□□□□ -2.31
SDHAP31040 MT-TY-201ENST00000387409 66 ntBASIC0.64□□□□□ -2.31
SDHAP31040 RNU6-1177P-201ENST00000391058 104 ntBASIC0.64□□□□□ -2.31
SDHAP31040 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.64□□□□□ -2.31
SDHAP31040 SNORD110-201ENST00000408189 75 ntBASIC0.64□□□□□ -2.31
SDHAP31040 RNU6-380P-201ENST00000410207 107 ntBASIC0.64□□□□□ -2.31
SDHAP31040 RNU2-59P-201ENST00000410482 191 ntBASIC0.64□□□□□ -2.31
SDHAP31040 RNA5SP121-201ENST00000516537 101 ntBASIC0.64□□□□□ -2.31
SDHAP31040 PVT1_3.1-201ENST00000620853 95 ntBASIC0.64□□□□□ -2.31
SDHAP31040 Y_RNA.423-201ENST00000384057 113 ntBASIC0.63□□□□□ -2.31
SDHAP31040 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.63□□□□□ -2.31
SDHAP31040 RNU6-557P-201ENST00000516842 110 ntBASIC0.63□□□□□ -2.31
SDHAP31040 RNU6-686P-201ENST00000364839 107 ntBASIC0.62□□□□□ -2.31
SDHAP31040 Y_RNA.371-201ENST00000365591 113 ntBASIC0.62□□□□□ -2.31
SDHAP31040 SNORA24B-201ENST00000384176 131 ntBASIC0.62□□□□□ -2.31
SDHAP31040 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
SDHAP31040 SNORD78.1-201ENST00000390866 65 ntBASIC0.62□□□□□ -2.31
SDHAP31040 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.62□□□□□ -2.31
SDHAP31040 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.62□□□□□ -2.31
SDHAP31040 AC097510.1-201ENST00000510945 133 ntBASIC0.62□□□□□ -2.31
SDHAP31040 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.62□□□□□ -2.31
SDHAP31040 CYP3A137P-201ENST00000562436 69 ntBASIC0.62□□□□□ -2.31
SDHAP31040 YWHAEP2-201ENST00000580066 112 ntBASIC0.62□□□□□ -2.31
SDHAP31040 SNORA70.25-201ENST00000612741 95 ntBASIC0.62□□□□□ -2.31
SDHAP31040 AC069503.3-201ENST00000618674 145 ntBASIC0.62□□□□□ -2.31
SDHAP31040 RNU6-478P-201ENST00000363904 110 ntBASIC0.61□□□□□ -2.31
SDHAP31040 SNORA2A-201ENST00000383885 135 ntBASIC0.61□□□□□ -2.31
SDHAP31040 RNU6-787P-201ENST00000384032 107 ntBASIC0.61□□□□□ -2.31
SDHAP31040 AC098934.3-201ENST00000430450 190 ntBASIC0.61□□□□□ -2.31
SDHAP31040 RNU6-229P-201ENST00000516614 102 ntBASIC0.61□□□□□ -2.31
SDHAP31040 MIR6835-201ENST00000621552 64 ntBASIC0.61□□□□□ -2.31
SDHAP31040 RNU6-228P-201ENST00000362700 106 ntBASIC0.6□□□□□ -2.31
SDHAP31040 RNU6-54P-201ENST00000365563 107 ntBASIC0.6□□□□□ -2.31
SDHAP31040 MIR1255A-201ENST00000408338 113 ntBASIC0.6□□□□□ -2.31
SDHAP31040 RNU5B-6P-201ENST00000516765 68 ntBASIC0.6□□□□□ -2.31
SDHAP31040 Y_RNA.12-201ENST00000362393 112 ntBASIC0.59□□□□□ -2.31
SDHAP31040 RNU6-315P-201ENST00000362666 107 ntBASIC0.59□□□□□ -2.31
SDHAP31040 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
SDHAP31040 MIR4473-201ENST00000583731 91 ntBASIC0.59□□□□□ -2.31
SDHAP31040 MIR6779-201ENST00000617283 64 ntBASIC0.59□□□□□ -2.31
SDHAP31040 MIR4773-1-201ENST00000637203 78 ntBASIC0.59□□□□□ -2.31
SDHAP31040 MIR216A-201ENST00000385063 110 ntBASIC0.58□□□□□ -2.32
SDHAP31040 MIR5706-201ENST00000579841 80 ntBASIC0.58□□□□□ -2.32
SDHAP31040 YWHAEP3-201ENST00000582767 121 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 233.5 ms