Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 RNA5SP257-201ENST00000363023 116 ntBASIC0.34□□□□□ -2.36
MMP8P22894 RNU6-640P-201ENST00000363693 105 ntBASIC0.34□□□□□ -2.36
MMP8P22894 Y_RNA.239-201ENST00000364444 113 ntBASIC0.34□□□□□ -2.36
MMP8P22894 RNU1-141P-201ENST00000364623 158 ntBASIC0.34□□□□□ -2.36
MMP8P22894 AC006210.1-201ENST00000424882 111 ntBASIC0.34□□□□□ -2.36
MMP8P22894 RNU6-863P-201ENST00000515989 104 ntBASIC0.34□□□□□ -2.36
MMP8P22894 AC073869.9-201ENST00000641610 120 ntBASIC0.34□□□□□ -2.36
MMP8P22894 SNORD110-201ENST00000408189 75 ntBASIC0.33□□□□□ -2.36
MMP8P22894 RNU6-1057P-201ENST00000517162 102 ntBASIC0.33□□□□□ -2.36
MMP8P22894 MALAT1.1-201ENST00000618249 95 ntBASIC0.33□□□□□ -2.36
MMP8P22894 RNU4-32P-201ENST00000363404 141 ntBASIC0.32□□□□□ -2.36
MMP8P22894 MIR488-201ENST00000365739 83 ntBASIC0.32□□□□□ -2.36
MMP8P22894 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
MMP8P22894 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.32□□□□□ -2.36
MMP8P22894 MIR499B-201ENST00000636498 73 ntBASIC0.32□□□□□ -2.36
MMP8P22894 RNU6-935P-201ENST00000410371 100 ntBASIC0.31□□□□□ -2.36
MMP8P22894 RNU6-1052P-201ENST00000411398 104 ntBASIC0.31□□□□□ -2.36
MMP8P22894 AC093423.1-201ENST00000440817 142 ntBASIC0.31□□□□□ -2.36
MMP8P22894 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
MMP8P22894 RNU6-719P-201ENST00000516671 104 ntBASIC0.31□□□□□ -2.36
MMP8P22894 MIR3064-201ENST00000581130 66 ntBASIC0.31□□□□□ -2.36
MMP8P22894 Y_RNA.258-201ENST00000364613 105 ntBASIC0.3□□□□□ -2.36
MMP8P22894 RNU6-1327P-201ENST00000365302 105 ntBASIC0.3□□□□□ -2.36
MMP8P22894 RNU6-811P-201ENST00000384069 107 ntBASIC0.3□□□□□ -2.36
MMP8P22894 Y_RNA.433-201ENST00000384089 102 ntBASIC0.3□□□□□ -2.36
MMP8P22894 MIR451A-201ENST00000385059 72 ntBASIC0.3□□□□□ -2.36
MMP8P22894 RNA5SP292-201ENST00000390974 118 ntBASIC0.3□□□□□ -2.36
MMP8P22894 MIR1197-201ENST00000408818 88 ntBASIC0.3□□□□□ -2.36
MMP8P22894 AC108740.1-201ENST00000498629 225 ntBASIC0.3□□□□□ -2.36
MMP8P22894 MIR4460-201ENST00000577862 86 ntBASIC0.3□□□□□ -2.36
MMP8P22894 MIR5706-201ENST00000579841 80 ntBASIC0.3□□□□□ -2.36
MMP8P22894 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.3□□□□□ -2.36
MMP8P22894 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.3□□□□□ -2.36
MMP8P22894 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
MMP8P22894 SNORA9.1-201ENST00000362412 131 ntBASIC0.29□□□□□ -2.36
MMP8P22894 Y_RNA.178-201ENST00000363832 102 ntBASIC0.29□□□□□ -2.36
MMP8P22894 RNA5SP128-201ENST00000365305 116 ntBASIC0.29□□□□□ -2.36
MMP8P22894 RNY1P7-201ENST00000384743 110 ntBASIC0.29□□□□□ -2.36
MMP8P22894 MIR548U-201ENST00000390728 81 ntBASIC0.29□□□□□ -2.36
MMP8P22894 AC069113.3-201ENST00000521019 150 ntBASIC0.29□□□□□ -2.36
MMP8P22894 AC104996.3-201ENST00000590718 94 ntBASIC0.29□□□□□ -2.36
MMP8P22894 RNA5SP63-201ENST00000391225 112 ntBASIC0.28□□□□□ -2.36
MMP8P22894 FGF7P7-201ENST00000514120 227 ntBASIC0.28□□□□□ -2.36
MMP8P22894 RNU5B-6P-201ENST00000516765 68 ntBASIC0.28□□□□□ -2.36
MMP8P22894 YWHAEP2-201ENST00000580066 112 ntBASIC0.28□□□□□ -2.36
MMP8P22894 Y_RNA.491-201ENST00000384417 107 ntBASIC0.27□□□□□ -2.37
MMP8P22894 HMGN2P22-201ENST00000427588 175 ntBASIC0.27□□□□□ -2.37
MMP8P22894 RNU6-848P-201ENST00000515948 107 ntBASIC0.27□□□□□ -2.37
MMP8P22894 RNU6-617P-201ENST00000516147 107 ntBASIC0.27□□□□□ -2.37
MMP8P22894 RNU6-473P-201ENST00000516164 107 ntBASIC0.27□□□□□ -2.37
MMP8P22894 RNU6-1049P-201ENST00000516414 107 ntBASIC0.27□□□□□ -2.37
MMP8P22894 SNORA18.5-201ENST00000516616 101 ntBASIC0.27□□□□□ -2.37
MMP8P22894 MIR4473-201ENST00000583731 91 ntBASIC0.27□□□□□ -2.37
MMP8P22894 AC023932.2-201ENST00000603176 175 ntBASIC0.27□□□□□ -2.37
MMP8P22894 MIR501-201ENST00000390204 84 ntBASIC0.26□□□□□ -2.37
MMP8P22894 MIR643-201ENST00000385267 97 ntBASIC0.25□□□□□ -2.37
MMP8P22894 RNU6-127P-201ENST00000390897 107 ntBASIC0.25□□□□□ -2.37
MMP8P22894 RNY4P30-201ENST00000410216 95 ntBASIC0.25□□□□□ -2.37
MMP8P22894 RNA5SP395-201ENST00000516567 118 ntBASIC0.25□□□□□ -2.37
MMP8P22894 MIR3140-201ENST00000583685 90 ntBASIC0.25□□□□□ -2.37
MMP8P22894 AC069503.3-201ENST00000618674 145 ntBASIC0.25□□□□□ -2.37
MMP8P22894 RNU6-1131P-201ENST00000364955 107 ntBASIC0.24□□□□□ -2.37
MMP8P22894 MT-TY-201ENST00000387409 66 ntBASIC0.24□□□□□ -2.37
MMP8P22894 SNORD90-201ENST00000391145 111 ntBASIC0.24□□□□□ -2.37
MMP8P22894 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.24□□□□□ -2.37
MMP8P22894 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.24□□□□□ -2.37
MMP8P22894 MIR4514-201ENST00000581410 57 ntBASIC0.24□□□□□ -2.37
MMP8P22894 U7.6-201ENST00000610841 64 ntBASIC0.24□□□□□ -2.37
MMP8P22894 Y_RNA.220-201ENST00000364244 109 ntBASIC0.23□□□□□ -2.37
MMP8P22894 RNU7-153P-201ENST00000516455 62 ntBASIC0.23□□□□□ -2.37
MMP8P22894 MIR4668-201ENST00000582284 70 ntBASIC0.23□□□□□ -2.37
MMP8P22894 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
MMP8P22894 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.22□□□□□ -2.37
MMP8P22894 Y_RNA.125-201ENST00000363371 111 ntBASIC0.22□□□□□ -2.37
MMP8P22894 SNORD115-27-201ENST00000364430 82 ntBASIC0.22□□□□□ -2.37
MMP8P22894 RNU6V-201ENST00000384105 107 ntBASIC0.22□□□□□ -2.37
MMP8P22894 RNU6-49P-201ENST00000384256 107 ntBASIC0.22□□□□□ -2.37
MMP8P22894 MIR4677-201ENST00000584153 80 ntBASIC0.22□□□□□ -2.37
MMP8P22894 RNU6-1051P-201ENST00000365471 102 ntBASIC0.21□□□□□ -2.38
MMP8P22894 MIR548AD-201ENST00000584780 82 ntBASIC0.21□□□□□ -2.38
MMP8P22894 MIR548O2-201ENST00000616090 70 ntBASIC0.21□□□□□ -2.38
MMP8P22894 MIR4315-1-201ENST00000636800 73 ntBASIC0.21□□□□□ -2.38
MMP8P22894 MIR4315-2-201ENST00000640925 73 ntBASIC0.21□□□□□ -2.38
MMP8P22894 SNORD116-22-201ENST00000384430 92 ntBASIC0.2□□□□□ -2.38
MMP8P22894 MIR216B-201ENST00000390186 82 ntBASIC0.2□□□□□ -2.38
MMP8P22894 MIR1236-201ENST00000408340 102 ntBASIC0.2□□□□□ -2.38
MMP8P22894 RNU6-402P-201ENST00000410678 103 ntBASIC0.2□□□□□ -2.38
MMP8P22894 SNORA25.13-201ENST00000516395 103 ntBASIC0.2□□□□□ -2.38
MMP8P22894 RNU6-267P-201ENST00000516714 103 ntBASIC0.2□□□□□ -2.38
MMP8P22894 MIR548AE1-201ENST00000583292 70 ntBASIC0.2□□□□□ -2.38
MMP8P22894 SNORA63.2-201ENST00000362603 126 ntBASIC0.19□□□□□ -2.38
MMP8P22894 RNU6-54P-201ENST00000365563 107 ntBASIC0.19□□□□□ -2.38
MMP8P22894 MIR516B1-201ENST00000385211 90 ntBASIC0.19□□□□□ -2.38
MMP8P22894 U3.27-201ENST00000391237 200 ntBASIC0.19□□□□□ -2.38
MMP8P22894 RNA5SP285-201ENST00000516619 119 ntBASIC0.19□□□□□ -2.38
MMP8P22894 MIR3925-201ENST00000584674 77 ntBASIC0.19□□□□□ -2.38
MMP8P22894 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
MMP8P22894 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.18□□□□□ -2.38
MMP8P22894 RNU6-762P-201ENST00000517107 102 ntBASIC0.18□□□□□ -2.38
MMP8P22894 MIR4796-201ENST00000580742 81 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 235.9 ms