Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.23□□□□□ -2.61
HLA-DPA1P20036 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.23□□□□□ -2.61
HLA-DPA1P20036 RNU6-781P-201ENST00000516377 101 ntBASIC-1.23□□□□□ -2.61
HLA-DPA1P20036 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.23□□□□□ -2.61
HLA-DPA1P20036 MIR517B-201ENST00000385102 67 ntBASIC-1.24□□□□□ -2.61
HLA-DPA1P20036 AL500527.2-201ENST00000454105 95 ntBASIC-1.24□□□□□ -2.61
HLA-DPA1P20036 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.25□□□□□ -2.61
HLA-DPA1P20036 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.25□□□□□ -2.61
HLA-DPA1P20036 MIR582-201ENST00000365731 98 ntBASIC-1.25□□□□□ -2.61
HLA-DPA1P20036 RNU6-574P-201ENST00000384265 107 ntBASIC-1.25□□□□□ -2.61
HLA-DPA1P20036 U3.27-201ENST00000391237 200 ntBASIC-1.25□□□□□ -2.61
HLA-DPA1P20036 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.26□□□□□ -2.61
HLA-DPA1P20036 SNORD116-18-201ENST00000383961 92 ntBASIC-1.26□□□□□ -2.61
HLA-DPA1P20036 AC022137.1-201ENST00000483735 151 ntBASIC-1.26□□□□□ -2.61
HLA-DPA1P20036 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.26□□□□□ -2.61
HLA-DPA1P20036 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.26□□□□□ -2.61
HLA-DPA1P20036 MIR8068-201ENST00000618032 68 ntBASIC-1.26□□□□□ -2.61
HLA-DPA1P20036 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.27□□□□□ -2.61
HLA-DPA1P20036 RNU6-476P-201ENST00000384726 107 ntBASIC-1.27□□□□□ -2.61
HLA-DPA1P20036 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.27□□□□□ -2.61
HLA-DPA1P20036 AP000533.3-201ENST00000447704 118 ntBASIC-1.27□□□□□ -2.61
HLA-DPA1P20036 SCARNA17-201ENST00000516183 144 ntBASIC-1.27□□□□□ -2.61
HLA-DPA1P20036 MIR548X2-201ENST00000579776 100 ntBASIC-1.27□□□□□ -2.61
HLA-DPA1P20036 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.27□□□□□ -2.61
HLA-DPA1P20036 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.28□□□□□ -2.61
HLA-DPA1P20036 RNU6-694P-201ENST00000364071 147 ntBASIC-1.28□□□□□ -2.61
HLA-DPA1P20036 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.28□□□□□ -2.61
HLA-DPA1P20036 RNU6-200P-201ENST00000364743 107 ntBASIC-1.28□□□□□ -2.61
HLA-DPA1P20036 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.28□□□□□ -2.61
HLA-DPA1P20036 MIR548E-201ENST00000408287 88 ntBASIC-1.28□□□□□ -2.61
HLA-DPA1P20036 U7.2-201ENST00000607576 63 ntBASIC-1.28□□□□□ -2.61
HLA-DPA1P20036 RNU6-65P-201ENST00000516332 98 ntBASIC-1.29□□□□□ -2.62
HLA-DPA1P20036 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.3□□□□□ -2.62
HLA-DPA1P20036 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.3□□□□□ -2.62
HLA-DPA1P20036 RNU6-75P-201ENST00000515944 104 ntBASIC-1.3□□□□□ -2.62
HLA-DPA1P20036 AC025166.1-201ENST00000612411 163 ntBASIC-1.3□□□□□ -2.62
HLA-DPA1P20036 MIR6854-201ENST00000614935 69 ntBASIC-1.3□□□□□ -2.62
HLA-DPA1P20036 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.31□□□□□ -2.62
HLA-DPA1P20036 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.31□□□□□ -2.62
HLA-DPA1P20036 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.31□□□□□ -2.62
HLA-DPA1P20036 MIR4536-1-201ENST00000583537 88 ntBASIC-1.31□□□□□ -2.62
HLA-DPA1P20036 uc_338.19-201ENST00000616808 99 ntBASIC-1.31□□□□□ -2.62
HLA-DPA1P20036 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.31□□□□□ -2.62
HLA-DPA1P20036 RNU6-905P-201ENST00000384434 107 ntBASIC-1.32□□□□□ -2.62
HLA-DPA1P20036 RNA5SP67-201ENST00000516422 131 ntBASIC-1.32□□□□□ -2.62
HLA-DPA1P20036 AC025521.1-201ENST00000621624 286 ntBASIC-1.32□□□□□ -2.62
HLA-DPA1P20036 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.33□□□□□ -2.62
HLA-DPA1P20036 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.33□□□□□ -2.62
HLA-DPA1P20036 RNU6-719P-201ENST00000516671 104 ntBASIC-1.33□□□□□ -2.62
HLA-DPA1P20036 MIR4499-201ENST00000584834 69 ntBASIC-1.33□□□□□ -2.62
HLA-DPA1P20036 RNU6-431P-201ENST00000383874 107 ntBASIC-1.34□□□□□ -2.62
HLA-DPA1P20036 RNU6-463P-201ENST00000384340 107 ntBASIC-1.34□□□□□ -2.62
HLA-DPA1P20036 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.34□□□□□ -2.62
HLA-DPA1P20036 RNU6-394P-201ENST00000410735 107 ntBASIC-1.34□□□□□ -2.62
HLA-DPA1P20036 FGF7P7-201ENST00000514120 227 ntBASIC-1.34□□□□□ -2.62
HLA-DPA1P20036 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.34□□□□□ -2.62
HLA-DPA1P20036 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.34□□□□□ -2.62
HLA-DPA1P20036 MIR409-201ENST00000362237 79 ntBASIC-1.35□□□□□ -2.63
HLA-DPA1P20036 SNORD64-201ENST00000386683 67 ntBASIC-1.35□□□□□ -2.63
HLA-DPA1P20036 SNORD42B-201ENST00000458893 67 ntBASIC-1.35□□□□□ -2.63
HLA-DPA1P20036 Y_RNA.700-201ENST00000516806 100 ntBASIC-1.35□□□□□ -2.63
HLA-DPA1P20036 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.36□□□□□ -2.63
HLA-DPA1P20036 SNORD74.6-201ENST00000364796 70 ntBASIC-1.36□□□□□ -2.63
HLA-DPA1P20036 MIR577-201ENST00000385196 96 ntBASIC-1.36□□□□□ -2.63
HLA-DPA1P20036 AC140658.3-201ENST00000567603 271 ntBASIC-1.36□□□□□ -2.63
HLA-DPA1P20036 AC004792.1-201ENST00000614523 137 ntBASIC-1.36□□□□□ -2.63
HLA-DPA1P20036 RNU6-379P-201ENST00000363813 104 ntBASIC-1.37□□□□□ -2.63
HLA-DPA1P20036 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.37□□□□□ -2.63
HLA-DPA1P20036 SNORD58C-201ENST00000365223 64 ntBASIC-1.37□□□□□ -2.63
HLA-DPA1P20036 SNORD50.2-201ENST00000365465 70 ntBASIC-1.37□□□□□ -2.63
HLA-DPA1P20036 RNU6-592P-201ENST00000411333 103 ntBASIC-1.37□□□□□ -2.63
HLA-DPA1P20036 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.38□□□□□ -2.63
HLA-DPA1P20036 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.38□□□□□ -2.63
HLA-DPA1P20036 MIR147A-201ENST00000385079 72 ntBASIC-1.38□□□□□ -2.63
HLA-DPA1P20036 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.38□□□□□ -2.63
HLA-DPA1P20036 MIR4694-201ENST00000578534 80 ntBASIC-1.38□□□□□ -2.63
HLA-DPA1P20036 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.39□□□□□ -2.63
HLA-DPA1P20036 SCARNA18B-201ENST00000458806 135 ntBASIC-1.39□□□□□ -2.63
HLA-DPA1P20036 RNU6-274P-201ENST00000459566 107 ntBASIC-1.39□□□□□ -2.63
HLA-DPA1P20036 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.39□□□□□ -2.63
HLA-DPA1P20036 snoR1.1-201ENST00000628177 80 ntBASIC-1.39□□□□□ -2.63
HLA-DPA1P20036 RNU6-804P-201ENST00000384286 107 ntBASIC-1.4□□□□□ -2.63
HLA-DPA1P20036 MIR569-201ENST00000385228 96 ntBASIC-1.4□□□□□ -2.63
HLA-DPA1P20036 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.4□□□□□ -2.63
HLA-DPA1P20036 RNU6-388P-201ENST00000517012 105 ntBASIC-1.4□□□□□ -2.63
HLA-DPA1P20036 RNU6-389P-201ENST00000517048 105 ntBASIC-1.4□□□□□ -2.63
HLA-DPA1P20036 MIR6738-201ENST00000619620 64 ntBASIC-1.4□□□□□ -2.63
HLA-DPA1P20036 MIR382-201ENST00000637119 76 ntBASIC-1.4□□□□□ -2.63
HLA-DPA1P20036 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.41□□□□□ -2.64
HLA-DPA1P20036 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.41□□□□□ -2.64
HLA-DPA1P20036 MIR3144-201ENST00000579460 79 ntBASIC-1.41□□□□□ -2.64
HLA-DPA1P20036 RNU6-832P-201ENST00000363319 107 ntBASIC-1.42□□□□□ -2.64
HLA-DPA1P20036 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.42□□□□□ -2.64
HLA-DPA1P20036 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.42□□□□□ -2.64
HLA-DPA1P20036 AL513043.2-201ENST00000573941 143 ntBASIC-1.42□□□□□ -2.64
HLA-DPA1P20036 MIR6773-201ENST00000612812 74 ntBASIC-1.42□□□□□ -2.64
HLA-DPA1P20036 SNORD115-23-201ENST00000364461 82 ntBASIC-1.43□□□□□ -2.64
HLA-DPA1P20036 RNU7-85P-201ENST00000458851 63 ntBASIC-1.43□□□□□ -2.64
HLA-DPA1P20036 SNORD18.2-201ENST00000459604 70 ntBASIC-1.44□□□□□ -2.64
HLA-DPA1P20036 MIR4324-201ENST00000584846 72 ntBASIC-1.44□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms