Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 RNU6-881P-201ENST00000516813 102 ntBASIC1.05□□□□□ -2.24
KRT4P19013 MIR4295-201ENST00000585286 85 ntBASIC1.05□□□□□ -2.24
KRT4P19013 RNU6-495P-201ENST00000362995 107 ntBASIC1.04□□□□□ -2.24
KRT4P19013 MIR519E-201ENST00000385075 84 ntBASIC1.04□□□□□ -2.24
KRT4P19013 SNORA17.3-201ENST00000391159 129 ntBASIC1.04□□□□□ -2.24
KRT4P19013 AC093423.1-201ENST00000440817 142 ntBASIC1.04□□□□□ -2.24
KRT4P19013 SNORD114-21-201ENST00000606412 72 ntBASIC1.04□□□□□ -2.24
KRT4P19013 MIR548O2-201ENST00000616090 70 ntBASIC1.04□□□□□ -2.24
KRT4P19013 AL353770.2-201ENST00000620024 78 ntBASIC1.04□□□□□ -2.24
KRT4P19013 RNU6-1216P-201ENST00000362590 107 ntBASIC1.03□□□□□ -2.24
KRT4P19013 SNORD105-201ENST00000386910 85 ntBASIC1.03□□□□□ -2.24
KRT4P19013 SNORD89-201ENST00000390981 114 ntBASIC1.03□□□□□ -2.24
KRT4P19013 RNU6-630P-201ENST00000391258 106 ntBASIC1.03□□□□□ -2.24
KRT4P19013 RNU4-62P-201ENST00000410125 130 ntBASIC1.03□□□□□ -2.24
KRT4P19013 AC005520.4-201ENST00000604337 90 ntBASIC1.03□□□□□ -2.24
KRT4P19013 MIR337-201ENST00000362281 93 ntBASIC1.02□□□□□ -2.25
KRT4P19013 SNORD113.1-201ENST00000363280 73 ntBASIC1.02□□□□□ -2.25
KRT4P19013 SNORA25.4-201ENST00000363666 124 ntBASIC1.02□□□□□ -2.25
KRT4P19013 Y_RNA.443-201ENST00000384135 111 ntBASIC1.02□□□□□ -2.25
KRT4P19013 SNORD28-201ENST00000384706 75 ntBASIC1.02□□□□□ -2.25
KRT4P19013 MIR19B1-201ENST00000384829 87 ntBASIC1.02□□□□□ -2.25
KRT4P19013 MIR644A-201ENST00000385262 94 ntBASIC1.02□□□□□ -2.25
KRT4P19013 RNU6-604P-201ENST00000390917 100 ntBASIC1.02□□□□□ -2.25
KRT4P19013 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
KRT4P19013 RNU7-95P-201ENST00000459222 64 ntBASIC1.02□□□□□ -2.25
KRT4P19013 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.02□□□□□ -2.25
KRT4P19013 RNU6-1187P-201ENST00000364771 110 ntBASIC1.01□□□□□ -2.25
KRT4P19013 RNU6-1039P-201ENST00000383931 107 ntBASIC1.01□□□□□ -2.25
KRT4P19013 MIR200A-201ENST00000384875 90 ntBASIC1.01□□□□□ -2.25
KRT4P19013 SNORD41.1-201ENST00000391000 69 ntBASIC1.01□□□□□ -2.25
KRT4P19013 SNORD124-201ENST00000459577 104 ntBASIC1.01□□□□□ -2.25
KRT4P19013 RNA5SP458-201ENST00000516188 119 ntBASIC1.01□□□□□ -2.25
KRT4P19013 MIR4661-201ENST00000582720 75 ntBASIC1.01□□□□□ -2.25
KRT4P19013 AC244669.1-204ENST00000621564 178 ntBASIC1.01□□□□□ -2.25
KRT4P19013 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
KRT4P19013 AL603825.1-201ENST00000438481 80 ntBASIC1□□□□□ -2.25
KRT4P19013 SNORD114-24-201ENST00000365029 72 ntBASIC0.99□□□□□ -2.25
KRT4P19013 MIR548L-201ENST00000408303 86 ntBASIC0.99□□□□□ -2.25
KRT4P19013 RPL39P28-201ENST00000465655 155 ntBASIC0.99□□□□□ -2.25
KRT4P19013 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.99□□□□□ -2.25
KRT4P19013 AC025627.3-201ENST00000582078 182 ntBASIC0.99□□□□□ -2.25
KRT4P19013 MIR6509-201ENST00000614603 85 ntBASIC0.99□□□□□ -2.25
KRT4P19013 SNORD18A-201ENST00000363753 72 ntBASIC0.98□□□□□ -2.25
KRT4P19013 RNU4-38P-201ENST00000364472 129 ntBASIC0.98□□□□□ -2.25
KRT4P19013 SNORD116-24-201ENST00000384549 92 ntBASIC0.98□□□□□ -2.25
KRT4P19013 NAMPTP3-201ENST00000569273 224 ntBASIC0.98□□□□□ -2.25
KRT4P19013 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.97□□□□□ -2.25
KRT4P19013 RNU6-726P-201ENST00000364680 107 ntBASIC0.97□□□□□ -2.25
KRT4P19013 RNU6V-201ENST00000384105 107 ntBASIC0.97□□□□□ -2.25
KRT4P19013 MIR573-201ENST00000384964 99 ntBASIC0.97□□□□□ -2.25
KRT4P19013 MT-TY-201ENST00000387409 66 ntBASIC0.97□□□□□ -2.25
KRT4P19013 MTND4LP1-201ENST00000446263 157 ntBASIC0.97□□□□□ -2.25
KRT4P19013 RNA5SP47-201ENST00000517230 109 ntBASIC0.97□□□□□ -2.25
KRT4P19013 AC103706.3-201ENST00000636297 85 ntBASIC0.97□□□□□ -2.25
KRT4P19013 RNU6-54P-201ENST00000365563 107 ntBASIC0.96□□□□□ -2.26
KRT4P19013 ACA64.5-201ENST00000516207 127 ntBASIC0.96□□□□□ -2.26
KRT4P19013 MIR4460-201ENST00000577862 86 ntBASIC0.96□□□□□ -2.26
KRT4P19013 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
KRT4P19013 RNU6-260P-201ENST00000384092 107 ntBASIC0.95□□□□□ -2.26
KRT4P19013 MIR7-2-201ENST00000384970 110 ntBASIC0.95□□□□□ -2.26
KRT4P19013 AC087343.1-201ENST00000477341 475 ntBASIC0.95□□□□□ -2.26
KRT4P19013 MIR3678-201ENST00000578455 94 ntBASIC0.95□□□□□ -2.26
KRT4P19013 MIR3612-201ENST00000579753 87 ntBASIC0.95□□□□□ -2.26
KRT4P19013 MIR4511-201ENST00000582784 87 ntBASIC0.95□□□□□ -2.26
KRT4P19013 AC073869.9-201ENST00000641610 120 ntBASIC0.95□□□□□ -2.26
KRT4P19013 MIR378A-201ENST00000362177 66 ntBASIC0.94□□□□□ -2.26
KRT4P19013 RNU1-141P-201ENST00000364623 158 ntBASIC0.94□□□□□ -2.26
KRT4P19013 SCARNA16.5-201ENST00000517114 183 ntBASIC0.94□□□□□ -2.26
KRT4P19013 MIR4498-201ENST00000577599 66 ntBASIC0.94□□□□□ -2.26
KRT4P19013 MIR3657-201ENST00000584818 117 ntBASIC0.94□□□□□ -2.26
KRT4P19013 MIR6078-201ENST00000611069 100 ntBASIC0.94□□□□□ -2.26
KRT4P19013 SNORD114-4-201ENST00000363962 75 ntBASIC0.93□□□□□ -2.26
KRT4P19013 RNU6-668P-201ENST00000364180 107 ntBASIC0.93□□□□□ -2.26
KRT4P19013 SNORA8.2-201ENST00000384372 139 ntBASIC0.93□□□□□ -2.26
KRT4P19013 AC108667.1-201ENST00000428618 249 ntBASIC0.93□□□□□ -2.26
KRT4P19013 SNORD42B-201ENST00000458893 67 ntBASIC0.93□□□□□ -2.26
KRT4P19013 RNU6-982P-201ENST00000516216 102 ntBASIC0.93□□□□□ -2.26
KRT4P19013 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.93□□□□□ -2.26
KRT4P19013 snoU13.31-201ENST00000607291 104 ntBASIC0.93□□□□□ -2.26
KRT4P19013 AC069503.3-201ENST00000618674 145 ntBASIC0.93□□□□□ -2.26
KRT4P19013 RNU6-716P-201ENST00000365621 103 ntBASIC0.92□□□□□ -2.26
KRT4P19013 MIR203A-201ENST00000384836 110 ntBASIC0.92□□□□□ -2.26
KRT4P19013 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.92□□□□□ -2.26
KRT4P19013 SNORA2.1-201ENST00000363089 137 ntBASIC0.91□□□□□ -2.26
KRT4P19013 RNU4-45P-201ENST00000365469 141 ntBASIC0.91□□□□□ -2.26
KRT4P19013 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
KRT4P19013 RNU6-269P-201ENST00000391077 97 ntBASIC0.91□□□□□ -2.26
KRT4P19013 AP1B1P2-201ENST00000416196 106 ntBASIC0.91□□□□□ -2.26
KRT4P19013 RNA5SP255-201ENST00000516370 107 ntBASIC0.91□□□□□ -2.26
KRT4P19013 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.91□□□□□ -2.26
KRT4P19013 MIR6828-201ENST00000636181 60 ntBASIC0.91□□□□□ -2.26
KRT4P19013 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.91□□□□□ -2.26
KRT4P19013 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.9□□□□□ -2.27
KRT4P19013 PSMC1P5-201ENST00000512850 177 ntBASIC0.9□□□□□ -2.27
KRT4P19013 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.9□□□□□ -2.27
KRT4P19013 AC211469.2-201ENST00000605461 205 ntBASIC0.9□□□□□ -2.27
KRT4P19013 Y_RNA.250-201ENST00000364542 110 ntBASIC0.89□□□□□ -2.27
KRT4P19013 RNU6-645P-201ENST00000364649 106 ntBASIC0.89□□□□□ -2.27
KRT4P19013 RNU6-1335P-201ENST00000365426 107 ntBASIC0.89□□□□□ -2.27
KRT4P19013 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms