Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 SNORD38.3-201ENST00000516599 73 ntBASIC-0.82□□□□□ -2.54
CD28P10747 MIR548X2-201ENST00000579776 100 ntBASIC-0.82□□□□□ -2.54
CD28P10747 RNU6-694P-201ENST00000364071 147 ntBASIC-0.83□□□□□ -2.54
CD28P10747 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.83□□□□□ -2.54
CD28P10747 RNA5SP266-201ENST00000410273 108 ntBASIC-0.83□□□□□ -2.54
CD28P10747 SNORD42B-201ENST00000458893 67 ntBASIC-0.83□□□□□ -2.54
CD28P10747 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.83□□□□□ -2.54
CD28P10747 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.83□□□□□ -2.54
CD28P10747 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.84□□□□□ -2.54
CD28P10747 SNORD50.2-201ENST00000365465 70 ntBASIC-0.84□□□□□ -2.54
CD28P10747 RNU6-463P-201ENST00000384340 107 ntBASIC-0.84□□□□□ -2.54
CD28P10747 RNU6-86P-201ENST00000606534 107 ntBASIC-0.84□□□□□ -2.54
CD28P10747 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.85□□□□□ -2.55
CD28P10747 RNU4-36P-201ENST00000364294 144 ntBASIC-0.85□□□□□ -2.55
CD28P10747 SNORD58C-201ENST00000365223 64 ntBASIC-0.85□□□□□ -2.55
CD28P10747 SNORD116-18-201ENST00000383961 92 ntBASIC-0.85□□□□□ -2.55
CD28P10747 RNU6-574P-201ENST00000384265 107 ntBASIC-0.85□□□□□ -2.55
CD28P10747 MIR518B-201ENST00000385127 83 ntBASIC-0.85□□□□□ -2.55
CD28P10747 MIR577-201ENST00000385196 96 ntBASIC-0.85□□□□□ -2.55
CD28P10747 AC097510.1-201ENST00000510945 133 ntBASIC-0.85□□□□□ -2.55
CD28P10747 RNU6-881P-201ENST00000516813 102 ntBASIC-0.85□□□□□ -2.55
CD28P10747 MIR4694-201ENST00000578534 80 ntBASIC-0.85□□□□□ -2.55
CD28P10747 AC025521.1-201ENST00000621624 286 ntBASIC-0.85□□□□□ -2.55
CD28P10747 MIR569-201ENST00000385228 96 ntBASIC-0.86□□□□□ -2.55
CD28P10747 RNU6-762P-201ENST00000517107 102 ntBASIC-0.86□□□□□ -2.55
CD28P10747 AC025166.1-201ENST00000612411 163 ntBASIC-0.86□□□□□ -2.55
CD28P10747 MTND5P18-201ENST00000445624 1801 ntBASIC-0.87□□□□□ -2.55
CD28P10747 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.87□□□□□ -2.55
CD28P10747 RNU7-85P-201ENST00000458851 63 ntBASIC-0.87□□□□□ -2.55
CD28P10747 MIR4679-2-201ENST00000578358 77 ntBASIC-0.87□□□□□ -2.55
CD28P10747 AC004792.1-201ENST00000614523 137 ntBASIC-0.87□□□□□ -2.55
CD28P10747 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.88□□□□□ -2.55
CD28P10747 RNU6-379P-201ENST00000363813 104 ntBASIC-0.88□□□□□ -2.55
CD28P10747 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.88□□□□□ -2.55
CD28P10747 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.88□□□□□ -2.55
CD28P10747 RNU6-592P-201ENST00000411333 103 ntBASIC-0.88□□□□□ -2.55
CD28P10747 RNU6-65P-201ENST00000516332 98 ntBASIC-0.88□□□□□ -2.55
CD28P10747 RNY1P9-201ENST00000532431 109 ntBASIC-0.88□□□□□ -2.55
CD28P10747 MIR3179-1-201ENST00000578940 84 ntBASIC-0.88□□□□□ -2.55
CD28P10747 MIR3179-2-201ENST00000579107 84 ntBASIC-0.88□□□□□ -2.55
CD28P10747 MIR3179-3-201ENST00000579566 84 ntBASIC-0.88□□□□□ -2.55
CD28P10747 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.88□□□□□ -2.55
CD28P10747 MIR4536-1-201ENST00000583537 88 ntBASIC-0.88□□□□□ -2.55
CD28P10747 MIR4439-201ENST00000583746 80 ntBASIC-0.88□□□□□ -2.55
CD28P10747 MIR3179-4-201ENST00000617599 84 ntBASIC-0.88□□□□□ -2.55
CD28P10747 SNORD74.6-201ENST00000364796 70 ntBASIC-0.89□□□□□ -2.55
CD28P10747 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.89□□□□□ -2.55
CD28P10747 MT-TG-201ENST00000387429 68 ntBASIC-0.89□□□□□ -2.55
CD28P10747 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.89□□□□□ -2.55
CD28P10747 RNU6-721P-201ENST00000410155 105 ntBASIC-0.89□□□□□ -2.55
CD28P10747 MIR6773-201ENST00000612812 74 ntBASIC-0.89□□□□□ -2.55
CD28P10747 MIR6854-201ENST00000614935 69 ntBASIC-0.89□□□□□ -2.55
CD28P10747 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.9□□□□□ -2.55
CD28P10747 RNU6-495P-201ENST00000362995 107 ntBASIC-0.9□□□□□ -2.55
CD28P10747 RNU6-832P-201ENST00000363319 107 ntBASIC-0.9□□□□□ -2.55
CD28P10747 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.9□□□□□ -2.55
CD28P10747 SNORD115-23-201ENST00000364461 82 ntBASIC-0.9□□□□□ -2.55
CD28P10747 AL513043.2-201ENST00000573941 143 ntBASIC-0.9□□□□□ -2.55
CD28P10747 MIR3144-201ENST00000579460 79 ntBASIC-0.9□□□□□ -2.55
CD28P10747 MIR5704-201ENST00000584029 77 ntBASIC-0.9□□□□□ -2.55
CD28P10747 SNORA63.2-201ENST00000362603 126 ntBASIC-0.91□□□□□ -2.56
CD28P10747 RNY3P2-201ENST00000362918 102 ntBASIC-0.91□□□□□ -2.56
CD28P10747 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.91□□□□□ -2.56
CD28P10747 SNORA63.6-201ENST00000364921 119 ntBASIC-0.91□□□□□ -2.56
CD28P10747 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.91□□□□□ -2.56
CD28P10747 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.91□□□□□ -2.56
CD28P10747 MIRLET7B-201ENST00000385140 83 ntBASIC-0.91□□□□□ -2.56
CD28P10747 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.91□□□□□ -2.56
CD28P10747 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.91□□□□□ -2.56
CD28P10747 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.91□□□□□ -2.56
CD28P10747 SNORD22.1-201ENST00000516331 125 ntBASIC-0.91□□□□□ -2.56
CD28P10747 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.92□□□□□ -2.56
CD28P10747 RNU6-132P-201ENST00000383863 107 ntBASIC-0.92□□□□□ -2.56
CD28P10747 SNORA24B-201ENST00000384176 131 ntBASIC-0.92□□□□□ -2.56
CD28P10747 RNU6-804P-201ENST00000384286 107 ntBASIC-0.92□□□□□ -2.56
CD28P10747 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.93□□□□□ -2.56
CD28P10747 RNU6-337P-201ENST00000391243 106 ntBASIC-0.93□□□□□ -2.56
CD28P10747 RNU7-24P-201ENST00000458867 62 ntBASIC-0.93□□□□□ -2.56
CD28P10747 FGF7P7-201ENST00000514120 227 ntBASIC-0.93□□□□□ -2.56
CD28P10747 AL035470.1-201ENST00000622571 220 ntBASIC-0.93□□□□□ -2.56
CD28P10747 MIR548U-201ENST00000390728 81 ntBASIC-0.94□□□□□ -2.56
CD28P10747 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.94□□□□□ -2.56
CD28P10747 RNU6-388P-201ENST00000517012 105 ntBASIC-0.94□□□□□ -2.56
CD28P10747 RNU6-389P-201ENST00000517048 105 ntBASIC-0.94□□□□□ -2.56
CD28P10747 MIR3613-201ENST00000579844 87 ntBASIC-0.94□□□□□ -2.56
CD28P10747 MIR3064-201ENST00000581130 66 ntBASIC-0.94□□□□□ -2.56
CD28P10747 MIR8068-201ENST00000618032 68 ntBASIC-0.94□□□□□ -2.56
CD28P10747 RNY1P7-201ENST00000384743 110 ntBASIC-0.95□□□□□ -2.56
CD28P10747 RNU6-644P-201ENST00000391155 98 ntBASIC-0.95□□□□□ -2.56
CD28P10747 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.95□□□□□ -2.56
CD28P10747 SNORD57-201ENST00000448188 72 ntBASIC-0.95□□□□□ -2.56
CD28P10747 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.95□□□□□ -2.56
CD28P10747 RNU6-719P-201ENST00000516671 104 ntBASIC-0.95□□□□□ -2.56
CD28P10747 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.96□□□□□ -2.56
CD28P10747 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.96□□□□□ -2.56
CD28P10747 MIR587-201ENST00000384845 96 ntBASIC-0.96□□□□□ -2.56
CD28P10747 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.96□□□□□ -2.56
CD28P10747 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.96□□□□□ -2.56
CD28P10747 AC022137.1-201ENST00000483735 151 ntBASIC-0.96□□□□□ -2.56
CD28P10747 RNU6-772P-201ENST00000516042 105 ntBASIC-0.96□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms