Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 RNU6-1052P-201ENST00000411398 104 ntBASIC0.23□□□□□ -2.37
HOXC4P09017 RNU6-719P-201ENST00000516671 104 ntBASIC0.23□□□□□ -2.37
HOXC4P09017 RNU6-267P-201ENST00000516714 103 ntBASIC0.23□□□□□ -2.37
HOXC4P09017 RNU6-1298P-201ENST00000362456 101 ntBASIC0.22□□□□□ -2.37
HOXC4P09017 Y_RNA.239-201ENST00000364444 113 ntBASIC0.22□□□□□ -2.37
HOXC4P09017 RNU1-141P-201ENST00000364623 158 ntBASIC0.22□□□□□ -2.37
HOXC4P09017 RNU6-1327P-201ENST00000365302 105 ntBASIC0.22□□□□□ -2.37
HOXC4P09017 RNU6-811P-201ENST00000384069 107 ntBASIC0.22□□□□□ -2.37
HOXC4P09017 RNU7-153P-201ENST00000516455 62 ntBASIC0.22□□□□□ -2.37
HOXC4P09017 SNORA18.5-201ENST00000516616 101 ntBASIC0.22□□□□□ -2.37
HOXC4P09017 MIR3140-201ENST00000583685 90 ntBASIC0.22□□□□□ -2.37
HOXC4P09017 AC104996.3-201ENST00000590718 94 ntBASIC0.22□□□□□ -2.37
HOXC4P09017 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.22□□□□□ -2.37
HOXC4P09017 RNU6-219P-201ENST00000364728 107 ntBASIC0.21□□□□□ -2.38
HOXC4P09017 MIR451A-201ENST00000385059 72 ntBASIC0.21□□□□□ -2.38
HOXC4P09017 RNU6-935P-201ENST00000410371 100 ntBASIC0.21□□□□□ -2.38
HOXC4P09017 RNU6-402P-201ENST00000410678 103 ntBASIC0.21□□□□□ -2.38
HOXC4P09017 RNU5B-6P-201ENST00000516765 68 ntBASIC0.21□□□□□ -2.38
HOXC4P09017 RNU6-844P-201ENST00000517175 102 ntBASIC0.21□□□□□ -2.38
HOXC4P09017 MIR4668-201ENST00000582284 70 ntBASIC0.21□□□□□ -2.38
HOXC4P09017 AC023932.2-201ENST00000603176 175 ntBASIC0.21□□□□□ -2.38
HOXC4P09017 MIR499B-201ENST00000636498 73 ntBASIC0.21□□□□□ -2.38
HOXC4P09017 RNA5SP62-201ENST00000363457 110 ntBASIC0.2□□□□□ -2.38
HOXC4P09017 SNORA2A-201ENST00000383885 135 ntBASIC0.2□□□□□ -2.38
HOXC4P09017 Y_RNA.491-201ENST00000384417 107 ntBASIC0.2□□□□□ -2.38
HOXC4P09017 MIR760-201ENST00000390220 80 ntBASIC0.2□□□□□ -2.38
HOXC4P09017 SNORD110-201ENST00000408189 75 ntBASIC0.2□□□□□ -2.38
HOXC4P09017 AC006210.1-201ENST00000424882 111 ntBASIC0.2□□□□□ -2.38
HOXC4P09017 HMGN2P22-201ENST00000427588 175 ntBASIC0.2□□□□□ -2.38
HOXC4P09017 AC108740.1-201ENST00000498629 225 ntBASIC0.2□□□□□ -2.38
HOXC4P09017 FGF7P7-201ENST00000514120 227 ntBASIC0.2□□□□□ -2.38
HOXC4P09017 RNU6-509P-201ENST00000363519 107 ntBASIC0.19□□□□□ -2.38
HOXC4P09017 Y_RNA.220-201ENST00000364244 109 ntBASIC0.19□□□□□ -2.38
HOXC4P09017 MIR501-201ENST00000390204 84 ntBASIC0.19□□□□□ -2.38
HOXC4P09017 Y_RNA.620-201ENST00000411009 88 ntBASIC0.19□□□□□ -2.38
HOXC4P09017 RNU7-74P-201ENST00000459104 62 ntBASIC0.19□□□□□ -2.38
HOXC4P09017 RNU7-129P-201ENST00000516128 62 ntBASIC0.19□□□□□ -2.38
HOXC4P09017 MIR4460-201ENST00000577862 86 ntBASIC0.19□□□□□ -2.38
HOXC4P09017 MIR5582-201ENST00000579697 68 ntBASIC0.19□□□□□ -2.38
HOXC4P09017 YWHAEP2-201ENST00000580066 112 ntBASIC0.19□□□□□ -2.38
HOXC4P09017 MIR4473-201ENST00000583731 91 ntBASIC0.19□□□□□ -2.38
HOXC4P09017 MIR8087-201ENST00000612745 78 ntBASIC0.19□□□□□ -2.38
HOXC4P09017 AC073869.9-201ENST00000641610 120 ntBASIC0.19□□□□□ -2.38
HOXC4P09017 Y_RNA.17-201ENST00000362433 111 ntBASIC0.18□□□□□ -2.38
HOXC4P09017 Y_RNA.258-201ENST00000364613 105 ntBASIC0.18□□□□□ -2.38
HOXC4P09017 RNA5SP128-201ENST00000365305 116 ntBASIC0.18□□□□□ -2.38
HOXC4P09017 RNU6V-201ENST00000384105 107 ntBASIC0.18□□□□□ -2.38
HOXC4P09017 SNORD116-22-201ENST00000384430 92 ntBASIC0.18□□□□□ -2.38
HOXC4P09017 MT-TY-201ENST00000387409 66 ntBASIC0.18□□□□□ -2.38
HOXC4P09017 MIR548U-201ENST00000390728 81 ntBASIC0.18□□□□□ -2.38
HOXC4P09017 Y_RNA.593-201ENST00000410292 98 ntBASIC0.18□□□□□ -2.38
HOXC4P09017 AC073261.1-201ENST00000429409 121 ntBASIC0.18□□□□□ -2.38
HOXC4P09017 snoU13.17-201ENST00000458802 104 ntBASIC0.18□□□□□ -2.38
HOXC4P09017 AC069113.3-201ENST00000521019 150 ntBASIC0.18□□□□□ -2.38
HOXC4P09017 MIR548AE1-201ENST00000583292 70 ntBASIC0.18□□□□□ -2.38
HOXC4P09017 MIR548O2-201ENST00000616090 70 ntBASIC0.18□□□□□ -2.38
HOXC4P09017 RNU6-633P-201ENST00000362612 103 ntBASIC0.17□□□□□ -2.38
HOXC4P09017 RNU6-497P-201ENST00000365316 104 ntBASIC0.17□□□□□ -2.38
HOXC4P09017 RNU6-1051P-201ENST00000365471 102 ntBASIC0.17□□□□□ -2.38
HOXC4P09017 RNU6-54P-201ENST00000365563 107 ntBASIC0.17□□□□□ -2.38
HOXC4P09017 SNORA24B-201ENST00000384176 131 ntBASIC0.17□□□□□ -2.38
HOXC4P09017 Y_RNA.558-201ENST00000384685 113 ntBASIC0.17□□□□□ -2.38
HOXC4P09017 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.17□□□□□ -2.38
HOXC4P09017 SNORA62.5-201ENST00000516634 120 ntBASIC0.17□□□□□ -2.38
HOXC4P09017 RNU6-1057P-201ENST00000517162 102 ntBASIC0.17□□□□□ -2.38
HOXC4P09017 MIR5706-201ENST00000579841 80 ntBASIC0.17□□□□□ -2.38
HOXC4P09017 Y_RNA.73-201ENST00000362910 113 ntBASIC0.16□□□□□ -2.38
HOXC4P09017 Y_RNA.125-201ENST00000363371 111 ntBASIC0.16□□□□□ -2.38
HOXC4P09017 RNU6-1134P-201ENST00000365156 101 ntBASIC0.16□□□□□ -2.38
HOXC4P09017 RNU6-127P-201ENST00000390897 107 ntBASIC0.16□□□□□ -2.38
HOXC4P09017 MIR1236-201ENST00000408340 102 ntBASIC0.16□□□□□ -2.38
HOXC4P09017 Y_RNA.694-201ENST00000516677 117 ntBASIC0.16□□□□□ -2.38
HOXC4P09017 RNA5SP330-201ENST00000517096 96 ntBASIC0.16□□□□□ -2.38
HOXC4P09017 RNA5SP170-201ENST00000517150 101 ntBASIC0.16□□□□□ -2.38
HOXC4P09017 MIR4796-201ENST00000580742 81 ntBASIC0.16□□□□□ -2.38
HOXC4P09017 MIR4514-201ENST00000581410 57 ntBASIC0.16□□□□□ -2.38
HOXC4P09017 MIR4677-201ENST00000584153 80 ntBASIC0.16□□□□□ -2.38
HOXC4P09017 MIR3925-201ENST00000584674 77 ntBASIC0.16□□□□□ -2.38
HOXC4P09017 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
HOXC4P09017 AC069503.3-201ENST00000618674 145 ntBASIC0.16□□□□□ -2.38
HOXC4P09017 SNORA9.1-201ENST00000362412 131 ntBASIC0.15□□□□□ -2.39
HOXC4P09017 SNORA63.2-201ENST00000362603 126 ntBASIC0.15□□□□□ -2.39
HOXC4P09017 RNA5SP457-201ENST00000363657 124 ntBASIC0.15□□□□□ -2.39
HOXC4P09017 MIR519C-201ENST00000385053 87 ntBASIC0.15□□□□□ -2.39
HOXC4P09017 MIR643-201ENST00000385267 97 ntBASIC0.15□□□□□ -2.39
HOXC4P09017 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
HOXC4P09017 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
HOXC4P09017 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
HOXC4P09017 SNORD42B-201ENST00000458893 67 ntBASIC0.15□□□□□ -2.39
HOXC4P09017 RNU6-848P-201ENST00000515948 107 ntBASIC0.15□□□□□ -2.39
HOXC4P09017 RNU6-617P-201ENST00000516147 107 ntBASIC0.15□□□□□ -2.39
HOXC4P09017 RNU6-473P-201ENST00000516164 107 ntBASIC0.15□□□□□ -2.39
HOXC4P09017 RNU6-1049P-201ENST00000516414 107 ntBASIC0.15□□□□□ -2.39
HOXC4P09017 RNU6-762P-201ENST00000517107 102 ntBASIC0.15□□□□□ -2.39
HOXC4P09017 MIR548AD-201ENST00000584780 82 ntBASIC0.15□□□□□ -2.39
HOXC4P09017 MIR548BB-201ENST00000626714 66 ntBASIC0.15□□□□□ -2.39
HOXC4P09017 RNU6-294P-201ENST00000364999 102 ntBASIC0.14□□□□□ -2.39
HOXC4P09017 RNU6-675P-201ENST00000384236 104 ntBASIC0.14□□□□□ -2.39
HOXC4P09017 U3.27-201ENST00000391237 200 ntBASIC0.14□□□□□ -2.39
HOXC4P09017 MIR548H2-201ENST00000408874 88 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 250.9 ms