Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 Y_RNA.325-201ENST00000365171 122 ntBASIC2.75□□□□□ -1.97
MYCNP04198 Y_RNA.407-201ENST00000383986 113 ntBASIC2.75□□□□□ -1.97
MYCNP04198 DLEU2_4.2-201ENST00000616613 58 ntBASIC2.75□□□□□ -1.97
MYCNP04198 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
MYCNP04198 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
MYCNP04198 SNORA9.1-201ENST00000362412 131 ntBASIC2.74□□□□□ -1.97
MYCNP04198 SNORA25.8-201ENST00000364831 128 ntBASIC2.74□□□□□ -1.97
MYCNP04198 SNORD105-201ENST00000386910 85 ntBASIC2.74□□□□□ -1.97
MYCNP04198 HMGN2P38-201ENST00000423806 265 ntBASIC2.74□□□□□ -1.97
MYCNP04198 RNU1-92P-201ENST00000517017 135 ntBASIC2.74□□□□□ -1.97
MYCNP04198 RNU6-548P-201ENST00000517083 115 ntBASIC2.74□□□□□ -1.97
MYCNP04198 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
MYCNP04198 RNA5SP489-201ENST00000410986 109 ntBASIC2.73□□□□□ -1.97
MYCNP04198 AL356320.1-201ENST00000429616 163 ntBASIC2.73□□□□□ -1.97
MYCNP04198 RNU6-1110P-201ENST00000516462 101 ntBASIC2.73□□□□□ -1.97
MYCNP04198 SCARNA16.5-201ENST00000517114 183 ntBASIC2.73□□□□□ -1.97
MYCNP04198 MIR3678-201ENST00000578455 94 ntBASIC2.73□□□□□ -1.97
MYCNP04198 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
MYCNP04198 MIR517C-201ENST00000385103 95 ntBASIC2.72□□□□□ -1.97
MYCNP04198 MIR652-201ENST00000385278 98 ntBASIC2.72□□□□□ -1.97
MYCNP04198 SNORD116.2-201ENST00000391251 93 ntBASIC2.72□□□□□ -1.97
MYCNP04198 AC002429.1-201ENST00000437672 148 ntBASIC2.72□□□□□ -1.97
MYCNP04198 AC026436.1-201ENST00000510537 270 ntBASIC2.71□□□□□ -1.98
MYCNP04198 MIR1273D-201ENST00000577266 86 ntBASIC2.71□□□□□ -1.98
MYCNP04198 SNORD114-1-201ENST00000362705 72 ntBASIC2.69□□□□□ -1.98
MYCNP04198 RNU6-35P-201ENST00000384530 107 ntBASIC2.69□□□□□ -1.98
MYCNP04198 RNU6-482P-201ENST00000391068 107 ntBASIC2.69□□□□□ -1.98
MYCNP04198 AL356379.1-201ENST00000414105 126 ntBASIC2.69□□□□□ -1.98
MYCNP04198 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.69□□□□□ -1.98
MYCNP04198 AL353997.5-201ENST00000618886 171 ntBASIC2.69□□□□□ -1.98
MYCNP04198 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.69□□□□□ -1.98
MYCNP04198 RNU4-33P-201ENST00000364316 85 ntBASIC2.68□□□□□ -1.98
MYCNP04198 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
MYCNP04198 RNU6-1246P-201ENST00000391064 107 ntBASIC2.67□□□□□ -1.98
MYCNP04198 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.67□□□□□ -1.98
MYCNP04198 MIR4448-201ENST00000584360 86 ntBASIC2.67□□□□□ -1.98
MYCNP04198 AL162376.1-201ENST00000624117 175 ntBASIC2.67□□□□□ -1.98
MYCNP04198 RNU6-930P-201ENST00000390938 100 ntBASIC2.66□□□□□ -1.98
MYCNP04198 U7.7-201ENST00000459276 60 ntBASIC2.66□□□□□ -1.98
MYCNP04198 MIR4473-201ENST00000583731 91 ntBASIC2.66□□□□□ -1.98
MYCNP04198 U6.96-201ENST00000636425 70 ntBASIC2.66□□□□□ -1.98
MYCNP04198 MIR582-201ENST00000365731 98 ntBASIC2.65□□□□□ -1.99
MYCNP04198 MIR548E-201ENST00000408287 88 ntBASIC2.65□□□□□ -1.99
MYCNP04198 FABP5P4-201ENST00000437203 171 ntBASIC2.65□□□□□ -1.99
MYCNP04198 Y_RNA.676-201ENST00000516393 96 ntBASIC2.65□□□□□ -1.99
MYCNP04198 AL021921.1-201ENST00000442774 93 ntBASIC2.64□□□□□ -1.99
MYCNP04198 CYP3A54P-201ENST00000566950 75 ntBASIC2.64□□□□□ -1.99
MYCNP04198 MIR3612-201ENST00000579753 87 ntBASIC2.64□□□□□ -1.99
MYCNP04198 MIR1291-201ENST00000627649 87 ntBASIC2.64□□□□□ -1.99
MYCNP04198 RNA5SP456-201ENST00000364002 114 ntBASIC2.63□□□□□ -1.99
MYCNP04198 RNU4-52P-201ENST00000384209 138 ntBASIC2.63□□□□□ -1.99
MYCNP04198 AC006210.1-201ENST00000424882 111 ntBASIC2.63□□□□□ -1.99
MYCNP04198 RNA5SP458-201ENST00000516188 119 ntBASIC2.63□□□□□ -1.99
MYCNP04198 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.63□□□□□ -1.99
MYCNP04198 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
MYCNP04198 SNORD116-16-201ENST00000384533 92 ntBASIC2.62□□□□□ -1.99
MYCNP04198 SNORA64-201ENST00000384674 134 ntBASIC2.62□□□□□ -1.99
MYCNP04198 MIR548AE1-201ENST00000583292 70 ntBASIC2.62□□□□□ -1.99
MYCNP04198 AL096840.1-201ENST00000603287 93 ntBASIC2.62□□□□□ -1.99
MYCNP04198 MIR7110-201ENST00000612638 86 ntBASIC2.62□□□□□ -1.99
MYCNP04198 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
MYCNP04198 MIR573-201ENST00000384964 99 ntBASIC2.61□□□□□ -1.99
MYCNP04198 RNU6-518P-201ENST00000516056 96 ntBASIC2.61□□□□□ -1.99
MYCNP04198 RNA5SP227-201ENST00000516184 113 ntBASIC2.61□□□□□ -1.99
MYCNP04198 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
MYCNP04198 AL603825.1-201ENST00000438481 80 ntBASIC2.6□□□□□ -1.99
MYCNP04198 MIR5092-201ENST00000583139 88 ntBASIC2.6□□□□□ -1.99
MYCNP04198 AP000553.5-201ENST00000641933 54 ntBASIC2.6□□□□□ -1.99
MYCNP04198 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
MYCNP04198 SNORA40.16-201ENST00000517238 121 ntBASIC2.59□□□□□ -1.99
MYCNP04198 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC2.59□□□□□ -1.99
MYCNP04198 MIR527-201ENST00000385244 85 ntBASIC2.58□□□□□ -2
MYCNP04198 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC2.58□□□□□ -2
MYCNP04198 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.58□□□□□ -2
MYCNP04198 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
MYCNP04198 Y_RNA.74-201ENST00000362911 99 ntBASIC2.57□□□□□ -2
MYCNP04198 Y_RNA.164-201ENST00000363709 102 ntBASIC2.57□□□□□ -2
MYCNP04198 SNORA25-201ENST00000384384 134 ntBASIC2.57□□□□□ -2
MYCNP04198 SNORD110-201ENST00000408189 75 ntBASIC2.57□□□□□ -2
MYCNP04198 Y_RNA.338-201ENST00000365320 114 ntBASIC2.56□□□□□ -2
MYCNP04198 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
MYCNP04198 MIR6828-201ENST00000636181 60 ntBASIC2.55□□□□□ -2
MYCNP04198 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
MYCNP04198 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.54□□□□□ -2
MYCNP04198 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.53□□□□□ -2
MYCNP04198 SNORA26.9-201ENST00000391322 122 ntBASIC2.53□□□□□ -2
MYCNP04198 MIR548X-201ENST00000580069 75 ntBASIC2.53□□□□□ -2
MYCNP04198 MIR516B1-201ENST00000385211 90 ntBASIC2.52□□□□□ -2.01
MYCNP04198 RNA5SP247-201ENST00000411181 105 ntBASIC2.52□□□□□ -2.01
MYCNP04198 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
MYCNP04198 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
MYCNP04198 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
MYCNP04198 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
MYCNP04198 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
MYCNP04198 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
MYCNP04198 SNORA40B-201ENST00000385573 128 ntBASIC2.5□□□□□ -2.01
MYCNP04198 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.5□□□□□ -2.01
MYCNP04198 MIR5007-201ENST00000583098 95 ntBASIC2.5□□□□□ -2.01
MYCNP04198 AC243829.6-201ENST00000612652 106 ntBASIC2.5□□□□□ -2.01
MYCNP04198 Y_RNA.282-201ENST00000364793 102 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms