Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MIR5009-201ENST00000578736 100 ntBASIC-0.22□□□□□ -2.44
PDGFBP01127 U6.95-201ENST00000636931 70 ntBASIC-0.22□□□□□ -2.44
PDGFBP01127 RNU6-161P-201ENST00000363051 106 ntBASIC-0.23□□□□□ -2.45
PDGFBP01127 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.23□□□□□ -2.45
PDGFBP01127 RNA5SP451-201ENST00000410588 110 ntBASIC-0.23□□□□□ -2.45
PDGFBP01127 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.23□□□□□ -2.45
PDGFBP01127 RNU6-65P-201ENST00000516332 98 ntBASIC-0.23□□□□□ -2.45
PDGFBP01127 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.23□□□□□ -2.45
PDGFBP01127 MIR4679-2-201ENST00000578358 77 ntBASIC-0.23□□□□□ -2.45
PDGFBP01127 MIR4536-1-201ENST00000583537 88 ntBASIC-0.23□□□□□ -2.45
PDGFBP01127 MIR548Z-201ENST00000584743 97 ntBASIC-0.23□□□□□ -2.45
PDGFBP01127 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.24□□□□□ -2.45
PDGFBP01127 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.24□□□□□ -2.45
PDGFBP01127 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.24□□□□□ -2.45
PDGFBP01127 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.24□□□□□ -2.45
PDGFBP01127 MT-TY-201ENST00000387409 66 ntBASIC-0.24□□□□□ -2.45
PDGFBP01127 RNU6-795P-201ENST00000516323 103 ntBASIC-0.24□□□□□ -2.45
PDGFBP01127 AL513043.2-201ENST00000573941 143 ntBASIC-0.24□□□□□ -2.45
PDGFBP01127 MIR3681-201ENST00000580089 72 ntBASIC-0.24□□□□□ -2.45
PDGFBP01127 AC103810.7-201ENST00000607821 91 ntBASIC-0.24□□□□□ -2.45
PDGFBP01127 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.25□□□□□ -2.45
PDGFBP01127 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.25□□□□□ -2.45
PDGFBP01127 RNU6-704P-201ENST00000364162 103 ntBASIC-0.26□□□□□ -2.45
PDGFBP01127 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.26□□□□□ -2.45
PDGFBP01127 SNORD116-14-201ENST00000383894 92 ntBASIC-0.26□□□□□ -2.45
PDGFBP01127 SNORD116-17-201ENST00000383929 92 ntBASIC-0.26□□□□□ -2.45
PDGFBP01127 SNORD116-15-201ENST00000384445 92 ntBASIC-0.26□□□□□ -2.45
PDGFBP01127 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.26□□□□□ -2.45
PDGFBP01127 SNORD116-19-201ENST00000384729 92 ntBASIC-0.26□□□□□ -2.45
PDGFBP01127 MIR876-201ENST00000401147 81 ntBASIC-0.26□□□□□ -2.45
PDGFBP01127 FGF7P7-201ENST00000514120 227 ntBASIC-0.26□□□□□ -2.45
PDGFBP01127 CR383656.4-201ENST00000546909 122 ntBASIC-0.26□□□□□ -2.45
PDGFBP01127 SNORD45B-201ENST00000364617 72 ntBASIC-0.27□□□□□ -2.45
PDGFBP01127 SNORD116-21-201ENST00000384507 92 ntBASIC-0.27□□□□□ -2.45
PDGFBP01127 MIR451A-201ENST00000385059 72 ntBASIC-0.27□□□□□ -2.45
PDGFBP01127 MIR652-201ENST00000385278 98 ntBASIC-0.27□□□□□ -2.45
PDGFBP01127 SNORA19.1-201ENST00000410656 129 ntBASIC-0.27□□□□□ -2.45
PDGFBP01127 RNU4-36P-201ENST00000364294 144 ntBASIC-0.28□□□□□ -2.45
PDGFBP01127 SNORD114-29-201ENST00000364819 70 ntBASIC-0.28□□□□□ -2.45
PDGFBP01127 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.28□□□□□ -2.45
PDGFBP01127 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.28□□□□□ -2.45
PDGFBP01127 RNU6-746P-201ENST00000384112 109 ntBASIC-0.28□□□□□ -2.45
PDGFBP01127 RNU6-935P-201ENST00000410371 100 ntBASIC-0.28□□□□□ -2.45
PDGFBP01127 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.28□□□□□ -2.45
PDGFBP01127 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.29□□□□□ -2.46
PDGFBP01127 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.29□□□□□ -2.46
PDGFBP01127 MIR224-201ENST00000384889 81 ntBASIC-0.29□□□□□ -2.46
PDGFBP01127 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.29□□□□□ -2.46
PDGFBP01127 AC012531.4-201ENST00000616509 177 ntBASIC-0.29□□□□□ -2.46
PDGFBP01127 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.3□□□□□ -2.46
PDGFBP01127 SNORD50.2-201ENST00000365465 70 ntBASIC-0.3□□□□□ -2.46
PDGFBP01127 RNU6-813P-201ENST00000384691 107 ntBASIC-0.3□□□□□ -2.46
PDGFBP01127 RNU6-75P-201ENST00000515944 104 ntBASIC-0.3□□□□□ -2.46
PDGFBP01127 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.31□□□□□ -2.46
PDGFBP01127 RNU6-54P-201ENST00000365563 107 ntBASIC-0.31□□□□□ -2.46
PDGFBP01127 RNU6-880P-201ENST00000384526 107 ntBASIC-0.31□□□□□ -2.46
PDGFBP01127 RNU7-85P-201ENST00000458851 63 ntBASIC-0.31□□□□□ -2.46
PDGFBP01127 SNORD4A-201ENST00000459174 72 ntBASIC-0.31□□□□□ -2.46
PDGFBP01127 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.31□□□□□ -2.46
PDGFBP01127 AL365222.1-201ENST00000614661 98 ntBASIC-0.31□□□□□ -2.46
PDGFBP01127 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
PDGFBP01127 RNU6-320P-201ENST00000516511 106 ntBASIC-0.32□□□□□ -2.46
PDGFBP01127 RNU6-175P-201ENST00000516896 107 ntBASIC-0.32□□□□□ -2.46
PDGFBP01127 AP000676.1-201ENST00000533307 52 ntBASIC-0.32□□□□□ -2.46
PDGFBP01127 MIR6507-201ENST00000613630 70 ntBASIC-0.32□□□□□ -2.46
PDGFBP01127 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.32□□□□□ -2.46
PDGFBP01127 RNU6-132P-201ENST00000383863 107 ntBASIC-0.33□□□□□ -2.46
PDGFBP01127 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.33□□□□□ -2.46
PDGFBP01127 RNU6-959P-201ENST00000384671 107 ntBASIC-0.33□□□□□ -2.46
PDGFBP01127 MIR548M-201ENST00000408260 86 ntBASIC-0.33□□□□□ -2.46
PDGFBP01127 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.33□□□□□ -2.46
PDGFBP01127 RNU6-412P-201ENST00000516434 106 ntBASIC-0.33□□□□□ -2.46
PDGFBP01127 MIR4777-201ENST00000583710 86 ntBASIC-0.33□□□□□ -2.46
PDGFBP01127 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.34□□□□□ -2.46
PDGFBP01127 SNORA18.1-201ENST00000363418 128 ntBASIC-0.34□□□□□ -2.46
PDGFBP01127 RNA5SP275-201ENST00000363936 118 ntBASIC-0.34□□□□□ -2.46
PDGFBP01127 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.34□□□□□ -2.46
PDGFBP01127 MIR1468-201ENST00000410600 86 ntBASIC-0.34□□□□□ -2.46
PDGFBP01127 AC244250.2-201ENST00000418731 148 ntBASIC-0.34□□□□□ -2.46
PDGFBP01127 MIR548O2-201ENST00000616090 70 ntBASIC-0.34□□□□□ -2.46
PDGFBP01127 MIR148A-201ENST00000362215 68 ntBASIC-0.35□□□□□ -2.47
PDGFBP01127 MIR20A-201ENST00000362279 71 ntBASIC-0.35□□□□□ -2.47
PDGFBP01127 SNORD75.1-201ENST00000408373 60 ntBASIC-0.35□□□□□ -2.47
PDGFBP01127 RNU6-519P-201ENST00000410590 108 ntBASIC-0.35□□□□□ -2.47
PDGFBP01127 AC096531.1-201ENST00000419107 107 ntBASIC-0.35□□□□□ -2.47
PDGFBP01127 MIR3140-201ENST00000583685 90 ntBASIC-0.35□□□□□ -2.47
PDGFBP01127 MIR548AZ-201ENST00000616567 95 ntBASIC-0.35□□□□□ -2.47
PDGFBP01127 RNU6-644P-201ENST00000391155 98 ntBASIC-0.36□□□□□ -2.47
PDGFBP01127 SNORD57-201ENST00000448188 72 ntBASIC-0.36□□□□□ -2.47
PDGFBP01127 MIR4439-201ENST00000583746 80 ntBASIC-0.36□□□□□ -2.47
PDGFBP01127 MIR4723-201ENST00000585070 81 ntBASIC-0.36□□□□□ -2.47
PDGFBP01127 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.36□□□□□ -2.47
PDGFBP01127 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.36□□□□□ -2.47
PDGFBP01127 RNU6-455P-201ENST00000384681 107 ntBASIC-0.37□□□□□ -2.47
PDGFBP01127 MIR216B-201ENST00000390186 82 ntBASIC-0.37□□□□□ -2.47
PDGFBP01127 SCARNA23-201ENST00000516060 130 ntBASIC-0.37□□□□□ -2.47
PDGFBP01127 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.37□□□□□ -2.47
PDGFBP01127 MIR6129-201ENST00000616087 109 ntBASIC-0.37□□□□□ -2.47
PDGFBP01127 MIR4788-201ENST00000639104 80 ntBASIC-0.37□□□□□ -2.47
PDGFBP01127 MIR548U-201ENST00000390728 81 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 197.3 ms