Protein–RNA interactions for Protein: O96018

APBA3, Amyloid-beta A4 precursor protein-binding family A member 3, humanhuman

Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3O96018 RNU6-542P-201ENST00000516405 103 ntBASIC1.84□□□□□ -2.11
APBA3O96018 SNORA40.17-201ENST00000517256 115 ntBASIC1.84□□□□□ -2.11
APBA3O96018 AC073869.9-201ENST00000641610 120 ntBASIC1.84□□□□□ -2.11
APBA3O96018 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.84□□□□□ -2.12
APBA3O96018 Y_RNA.363-201ENST00000365529 113 ntBASIC1.83□□□□□ -2.12
APBA3O96018 RNU6-54P-201ENST00000365563 107 ntBASIC1.83□□□□□ -2.12
APBA3O96018 RPS26P5-201ENST00000418544 335 ntBASIC1.83□□□□□ -2.12
APBA3O96018 RNU7-102P-201ENST00000458948 62 ntBASIC1.83□□□□□ -2.12
APBA3O96018 AC048334.1-201ENST00000477975 159 ntBASIC1.83□□□□□ -2.12
APBA3O96018 MIR3664-201ENST00000579074 99 ntBASIC1.83□□□□□ -2.12
APBA3O96018 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
APBA3O96018 Y_RNA.32-201ENST00000362589 110 ntBASIC1.82□□□□□ -2.12
APBA3O96018 Y_RNA.178-201ENST00000363832 102 ntBASIC1.82□□□□□ -2.12
APBA3O96018 MTND4LP1-201ENST00000446263 157 ntBASIC1.82□□□□□ -2.12
APBA3O96018 SNORD42B-201ENST00000458893 67 ntBASIC1.82□□□□□ -2.12
APBA3O96018 AC023827.1-201ENST00000569247 97 ntBASIC1.82□□□□□ -2.12
APBA3O96018 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.81□□□□□ -2.12
APBA3O96018 RNA5SP403-201ENST00000363598 108 ntBASIC1.81□□□□□ -2.12
APBA3O96018 RNU6-645P-201ENST00000364649 106 ntBASIC1.81□□□□□ -2.12
APBA3O96018 SNORD115-44-201ENST00000365391 82 ntBASIC1.81□□□□□ -2.12
APBA3O96018 SCARNA21.1-201ENST00000515996 128 ntBASIC1.81□□□□□ -2.12
APBA3O96018 RNU7-13P-201ENST00000516413 62 ntBASIC1.81□□□□□ -2.12
APBA3O96018 RNU7-161P-201ENST00000517289 62 ntBASIC1.81□□□□□ -2.12
APBA3O96018 MIR3657-201ENST00000584818 117 ntBASIC1.81□□□□□ -2.12
APBA3O96018 AC027335.2-201ENST00000624030 375 ntBASIC1.81□□□□□ -2.12
APBA3O96018 RNU6-364P-201ENST00000384387 107 ntBASIC1.8□□□□□ -2.12
APBA3O96018 SUMO2P12-201ENST00000405924 140 ntBASIC1.8□□□□□ -2.12
APBA3O96018 SNORA31.14-201ENST00000516728 116 ntBASIC1.8□□□□□ -2.12
APBA3O96018 RNU6-902P-201ENST00000517212 91 ntBASIC1.8□□□□□ -2.12
APBA3O96018 MIR6767-201ENST00000637302 66 ntBASIC1.8□□□□□ -2.12
APBA3O96018 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.79□□□□□ -2.12
APBA3O96018 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.79□□□□□ -2.12
APBA3O96018 AC106800.4-201ENST00000614905 153 ntBASIC1.79□□□□□ -2.12
APBA3O96018 MIR548O2-201ENST00000616090 70 ntBASIC1.79□□□□□ -2.12
APBA3O96018 SNORD115-24-201ENST00000363528 82 ntBASIC1.78□□□□□ -2.12
APBA3O96018 MIR938-201ENST00000401216 83 ntBASIC1.78□□□□□ -2.12
APBA3O96018 AL512310.8-201ENST00000550183 120 ntBASIC1.78□□□□□ -2.12
APBA3O96018 MIR4804-201ENST00000581683 73 ntBASIC1.78□□□□□ -2.12
APBA3O96018 uc_338.16-201ENST00000621804 95 ntBASIC1.78□□□□□ -2.12
APBA3O96018 MIR519E-201ENST00000385075 84 ntBASIC1.77□□□□□ -2.13
APBA3O96018 SNORA75.1-201ENST00000391130 148 ntBASIC1.77□□□□□ -2.13
APBA3O96018 RNA5SP299-201ENST00000391203 116 ntBASIC1.77□□□□□ -2.13
APBA3O96018 RNU7-56P-201ENST00000458744 62 ntBASIC1.77□□□□□ -2.13
APBA3O96018 RN7SKP88-201ENST00000516847 250 ntBASIC1.77□□□□□ -2.13
APBA3O96018 7SK.8-201ENST00000612110 250 ntBASIC1.77□□□□□ -2.13
APBA3O96018 7SK.11-201ENST00000615477 250 ntBASIC1.77□□□□□ -2.13
APBA3O96018 7SK.13-201ENST00000622040 250 ntBASIC1.77□□□□□ -2.13
APBA3O96018 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
APBA3O96018 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
APBA3O96018 RNU6-990P-201ENST00000364385 104 ntBASIC1.76□□□□□ -2.13
APBA3O96018 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
APBA3O96018 RNU6-656P-201ENST00000516785 107 ntBASIC1.76□□□□□ -2.13
APBA3O96018 AC012493.3-201ENST00000604494 112 ntBASIC1.76□□□□□ -2.13
APBA3O96018 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.76□□□□□ -2.13
APBA3O96018 RNU6-940P-201ENST00000363433 104 ntBASIC1.75□□□□□ -2.13
APBA3O96018 SNORD111-201ENST00000408139 94 ntBASIC1.75□□□□□ -2.13
APBA3O96018 RNU7-104P-201ENST00000459398 79 ntBASIC1.75□□□□□ -2.13
APBA3O96018 RNA5SP147-201ENST00000516493 109 ntBASIC1.75□□□□□ -2.13
APBA3O96018 Y_RNA.722-201ENST00000517279 114 ntBASIC1.75□□□□□ -2.13
APBA3O96018 RN7SL793P-201ENST00000583259 296 ntBASIC1.75□□□□□ -2.13
APBA3O96018 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
APBA3O96018 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
APBA3O96018 RNA5SP363-201ENST00000365072 115 ntBASIC1.74□□□□□ -2.13
APBA3O96018 RNU6-936P-201ENST00000384005 107 ntBASIC1.74□□□□□ -2.13
APBA3O96018 RNU6-260P-201ENST00000384092 107 ntBASIC1.74□□□□□ -2.13
APBA3O96018 MIR617-201ENST00000385030 97 ntBASIC1.74□□□□□ -2.13
APBA3O96018 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.74□□□□□ -2.13
APBA3O96018 SNORA31.2-201ENST00000516019 134 ntBASIC1.74□□□□□ -2.13
APBA3O96018 MIR4448-201ENST00000584360 86 ntBASIC1.74□□□□□ -2.13
APBA3O96018 MIR3660-201ENST00000584845 100 ntBASIC1.74□□□□□ -2.13
APBA3O96018 RNU6V-201ENST00000384105 107 ntBASIC1.73□□□□□ -2.13
APBA3O96018 MIR222-201ENST00000384992 110 ntBASIC1.73□□□□□ -2.13
APBA3O96018 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.73□□□□□ -2.13
APBA3O96018 AC067940.1-201ENST00000458411 300 ntBASIC1.73□□□□□ -2.13
APBA3O96018 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
APBA3O96018 RNU7-21P-201ENST00000459430 62 ntBASIC1.71□□□□□ -2.14
APBA3O96018 RNA5SP364-201ENST00000516938 78 ntBASIC1.71□□□□□ -2.14
APBA3O96018 RNU6-1089P-201ENST00000516473 104 ntBASIC1.7□□□□□ -2.14
APBA3O96018 RNU6-122P-201ENST00000516818 107 ntBASIC1.7□□□□□ -2.14
APBA3O96018 MIR3938-201ENST00000582157 103 ntBASIC1.7□□□□□ -2.14
APBA3O96018 MIR548V-201ENST00000584165 80 ntBASIC1.7□□□□□ -2.14
APBA3O96018 SNORA2.1-201ENST00000363089 137 ntBASIC1.69□□□□□ -2.14
APBA3O96018 RNU1-119P-201ENST00000391122 165 ntBASIC1.69□□□□□ -2.14
APBA3O96018 AL136317.1-201ENST00000612653 226 ntBASIC1.69□□□□□ -2.14
APBA3O96018 uc_338.20-201ENST00000621563 178 ntBASIC1.69□□□□□ -2.14
APBA3O96018 SNORD60.1-201ENST00000362451 73 ntBASIC1.68□□□□□ -2.14
APBA3O96018 RNU6-1184P-201ENST00000384588 108 ntBASIC1.68□□□□□ -2.14
APBA3O96018 MIR216B-201ENST00000390186 82 ntBASIC1.68□□□□□ -2.14
APBA3O96018 MIR216A-201ENST00000385063 110 ntBASIC1.67□□□□□ -2.14
APBA3O96018 MIR644A-201ENST00000385262 94 ntBASIC1.67□□□□□ -2.14
APBA3O96018 AL591704.2-201ENST00000421658 181 ntBASIC1.67□□□□□ -2.14
APBA3O96018 RNU6-92P-201ENST00000605893 104 ntBASIC1.67□□□□□ -2.14
APBA3O96018 MIR6739-201ENST00000622461 75 ntBASIC1.67□□□□□ -2.14
APBA3O96018 RNA5SP215-201ENST00000363440 122 ntBASIC1.66□□□□□ -2.14
APBA3O96018 RNU6-1335P-201ENST00000365426 107 ntBASIC1.66□□□□□ -2.14
APBA3O96018 MIR520F-201ENST00000384824 87 ntBASIC1.66□□□□□ -2.14
APBA3O96018 MIR100-201ENST00000385259 80 ntBASIC1.66□□□□□ -2.14
APBA3O96018 RNU6-994P-201ENST00000410507 111 ntBASIC1.66□□□□□ -2.14
APBA3O96018 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
APBA3O96018 Y_RNA.174-201ENST00000363781 105 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 245.2 ms