Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RNU6-762P-201ENST00000517107 102 ntBASIC-0.36□□□□□ -2.47
CTDNEP1O95476 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.36□□□□□ -2.47
CTDNEP1O95476 MIR4536-1-201ENST00000583537 88 ntBASIC-0.36□□□□□ -2.47
CTDNEP1O95476 MIR4777-201ENST00000583710 86 ntBASIC-0.36□□□□□ -2.47
CTDNEP1O95476 AC103810.7-201ENST00000607821 91 ntBASIC-0.36□□□□□ -2.47
CTDNEP1O95476 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.36□□□□□ -2.47
CTDNEP1O95476 U6.95-201ENST00000636931 70 ntBASIC-0.36□□□□□ -2.47
CTDNEP1O95476 MIR9-2-201ENST00000384838 87 ntBASIC-0.37□□□□□ -2.47
CTDNEP1O95476 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.37□□□□□ -2.47
CTDNEP1O95476 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.37□□□□□ -2.47
CTDNEP1O95476 MIR4439-201ENST00000583746 80 ntBASIC-0.37□□□□□ -2.47
CTDNEP1O95476 MIR4788-201ENST00000639104 80 ntBASIC-0.37□□□□□ -2.47
CTDNEP1O95476 SNORD114-11-201ENST00000363738 75 ntBASIC-0.38□□□□□ -2.47
CTDNEP1O95476 SNORD45B-201ENST00000364617 72 ntBASIC-0.38□□□□□ -2.47
CTDNEP1O95476 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.38□□□□□ -2.47
CTDNEP1O95476 RNU6-455P-201ENST00000384681 107 ntBASIC-0.38□□□□□ -2.47
CTDNEP1O95476 RNU6-813P-201ENST00000384691 107 ntBASIC-0.38□□□□□ -2.47
CTDNEP1O95476 MIR216B-201ENST00000390186 82 ntBASIC-0.38□□□□□ -2.47
CTDNEP1O95476 SNORA19.1-201ENST00000410656 129 ntBASIC-0.38□□□□□ -2.47
CTDNEP1O95476 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.38□□□□□ -2.47
CTDNEP1O95476 AC097510.1-201ENST00000510945 133 ntBASIC-0.38□□□□□ -2.47
CTDNEP1O95476 RNU6-795P-201ENST00000516323 103 ntBASIC-0.38□□□□□ -2.47
CTDNEP1O95476 RNU6-65P-201ENST00000516332 98 ntBASIC-0.38□□□□□ -2.47
CTDNEP1O95476 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.38□□□□□ -2.47
CTDNEP1O95476 RNU6-719P-201ENST00000516671 104 ntBASIC-0.38□□□□□ -2.47
CTDNEP1O95476 AC012531.4-201ENST00000616509 177 ntBASIC-0.38□□□□□ -2.47
CTDNEP1O95476 SNORD116-14-201ENST00000383894 92 ntBASIC-0.39□□□□□ -2.47
CTDNEP1O95476 SNORD116-17-201ENST00000383929 92 ntBASIC-0.39□□□□□ -2.47
CTDNEP1O95476 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.39□□□□□ -2.47
CTDNEP1O95476 SNORD116-15-201ENST00000384445 92 ntBASIC-0.39□□□□□ -2.47
CTDNEP1O95476 SNORD116-19-201ENST00000384729 92 ntBASIC-0.39□□□□□ -2.47
CTDNEP1O95476 MT-TR-201ENST00000387439 65 ntBASIC-0.39□□□□□ -2.47
CTDNEP1O95476 MIR548E-201ENST00000408287 88 ntBASIC-0.39□□□□□ -2.47
CTDNEP1O95476 RNU6-320P-201ENST00000516511 106 ntBASIC-0.39□□□□□ -2.47
CTDNEP1O95476 AP000676.1-201ENST00000533307 52 ntBASIC-0.39□□□□□ -2.47
CTDNEP1O95476 MIR3140-201ENST00000583685 90 ntBASIC-0.39□□□□□ -2.47
CTDNEP1O95476 RNU6-704P-201ENST00000364162 103 ntBASIC-0.4□□□□□ -2.47
CTDNEP1O95476 RNU6-644P-201ENST00000391155 98 ntBASIC-0.4□□□□□ -2.47
CTDNEP1O95476 U3.27-201ENST00000391237 200 ntBASIC-0.4□□□□□ -2.47
CTDNEP1O95476 SNORD4B-201ENST00000459083 72 ntBASIC-0.4□□□□□ -2.47
CTDNEP1O95476 FGF7P7-201ENST00000514120 227 ntBASIC-0.4□□□□□ -2.47
CTDNEP1O95476 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.4□□□□□ -2.47
CTDNEP1O95476 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.4□□□□□ -2.47
CTDNEP1O95476 MIR3064-201ENST00000581130 66 ntBASIC-0.4□□□□□ -2.47
CTDNEP1O95476 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.41□□□□□ -2.48
CTDNEP1O95476 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.41□□□□□ -2.48
CTDNEP1O95476 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
CTDNEP1O95476 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.41□□□□□ -2.48
CTDNEP1O95476 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.41□□□□□ -2.48
CTDNEP1O95476 MIR4263-201ENST00000584745 83 ntBASIC-0.41□□□□□ -2.48
CTDNEP1O95476 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.41□□□□□ -2.48
CTDNEP1O95476 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.42□□□□□ -2.48
CTDNEP1O95476 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.42□□□□□ -2.48
CTDNEP1O95476 SNORD90-201ENST00000391145 111 ntBASIC-0.42□□□□□ -2.48
CTDNEP1O95476 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.42□□□□□ -2.48
CTDNEP1O95476 SNORD114-31-201ENST00000363219 75 ntBASIC-0.43□□□□□ -2.48
CTDNEP1O95476 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.43□□□□□ -2.48
CTDNEP1O95476 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.43□□□□□ -2.48
CTDNEP1O95476 SNORA24B-201ENST00000384176 131 ntBASIC-0.43□□□□□ -2.48
CTDNEP1O95476 SNORD116-21-201ENST00000384507 92 ntBASIC-0.43□□□□□ -2.48
CTDNEP1O95476 RNU6-880P-201ENST00000384526 107 ntBASIC-0.43□□□□□ -2.48
CTDNEP1O95476 SNORD56B-201ENST00000384713 71 ntBASIC-0.43□□□□□ -2.48
CTDNEP1O95476 SNORD126-201ENST00000459475 77 ntBASIC-0.43□□□□□ -2.48
CTDNEP1O95476 IGLVI-20-201ENST00000519296 130 ntBASIC-0.43□□□□□ -2.48
CTDNEP1O95476 MIR3668-201ENST00000582138 75 ntBASIC-0.43□□□□□ -2.48
CTDNEP1O95476 AC104996.3-201ENST00000590718 94 ntBASIC-0.43□□□□□ -2.48
CTDNEP1O95476 SNORA63.2-201ENST00000362603 126 ntBASIC-0.44□□□□□ -2.48
CTDNEP1O95476 RNU4-36P-201ENST00000364294 144 ntBASIC-0.44□□□□□ -2.48
CTDNEP1O95476 SNORD14C-201ENST00000365382 88 ntBASIC-0.44□□□□□ -2.48
CTDNEP1O95476 RNU6-746P-201ENST00000384112 109 ntBASIC-0.44□□□□□ -2.48
CTDNEP1O95476 RNU6-900P-201ENST00000384498 102 ntBASIC-0.44□□□□□ -2.48
CTDNEP1O95476 RNA5SP292-201ENST00000390974 118 ntBASIC-0.44□□□□□ -2.48
CTDNEP1O95476 RNU6-904P-201ENST00000516206 101 ntBASIC-0.44□□□□□ -2.48
CTDNEP1O95476 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.45□□□□□ -2.48
CTDNEP1O95476 SNORD115-25-201ENST00000362619 82 ntBASIC-0.45□□□□□ -2.48
CTDNEP1O95476 MIR196A2-201ENST00000385189 110 ntBASIC-0.45□□□□□ -2.48
CTDNEP1O95476 RNU7-55P-201ENST00000459426 62 ntBASIC-0.45□□□□□ -2.48
CTDNEP1O95476 RNA5SP66-201ENST00000517178 101 ntBASIC-0.45□□□□□ -2.48
CTDNEP1O95476 RNU6-537P-201ENST00000517277 103 ntBASIC-0.45□□□□□ -2.48
CTDNEP1O95476 RNU6-495P-201ENST00000362995 107 ntBASIC-0.46□□□□□ -2.48
CTDNEP1O95476 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.46□□□□□ -2.48
CTDNEP1O95476 RNU6-959P-201ENST00000384671 107 ntBASIC-0.46□□□□□ -2.48
CTDNEP1O95476 MIR548U-201ENST00000390728 81 ntBASIC-0.46□□□□□ -2.48
CTDNEP1O95476 AC096531.1-201ENST00000419107 107 ntBASIC-0.46□□□□□ -2.48
CTDNEP1O95476 snoU13.13-201ENST00000458842 104 ntBASIC-0.46□□□□□ -2.48
CTDNEP1O95476 SCARNA23-201ENST00000516060 130 ntBASIC-0.46□□□□□ -2.48
CTDNEP1O95476 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.47□□□□□ -2.48
CTDNEP1O95476 RNA5SP275-201ENST00000363936 118 ntBASIC-0.47□□□□□ -2.48
CTDNEP1O95476 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.47□□□□□ -2.48
CTDNEP1O95476 SNORD58A-201ENST00000383875 65 ntBASIC-0.47□□□□□ -2.48
CTDNEP1O95476 RNU6-519P-201ENST00000410590 108 ntBASIC-0.47□□□□□ -2.48
CTDNEP1O95476 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.47□□□□□ -2.48
CTDNEP1O95476 AL445193.1-201ENST00000441183 141 ntBASIC-0.47□□□□□ -2.48
CTDNEP1O95476 RNA5SP169-201ENST00000517268 117 ntBASIC-0.47□□□□□ -2.48
CTDNEP1O95476 MIR4432-201ENST00000581823 84 ntBASIC-0.47□□□□□ -2.48
CTDNEP1O95476 MIR4802-201ENST00000581881 80 ntBASIC-0.47□□□□□ -2.48
CTDNEP1O95476 MIR4280-201ENST00000582178 76 ntBASIC-0.47□□□□□ -2.48
CTDNEP1O95476 RNU6-502P-201ENST00000362419 108 ntBASIC-0.48□□□□□ -2.49
CTDNEP1O95476 SNORD114-4-201ENST00000363962 75 ntBASIC-0.48□□□□□ -2.49
CTDNEP1O95476 RNU6-476P-201ENST00000384726 107 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms