Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 MIR7110-201ENST00000612638 86 ntBASIC2.84□□□□□ -1.95
NPM3O75607 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NPM3O75607 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
NPM3O75607 SNORD116-16-201ENST00000384533 92 ntBASIC2.83□□□□□ -1.96
NPM3O75607 Y_RNA.74-201ENST00000362911 99 ntBASIC2.82□□□□□ -1.96
NPM3O75607 AC006210.1-201ENST00000424882 111 ntBASIC2.82□□□□□ -1.96
NPM3O75607 MIR3612-201ENST00000579753 87 ntBASIC2.82□□□□□ -1.96
NPM3O75607 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NPM3O75607 MIR573-201ENST00000384964 99 ntBASIC2.81□□□□□ -1.96
NPM3O75607 MIR548E-201ENST00000408287 88 ntBASIC2.81□□□□□ -1.96
NPM3O75607 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NPM3O75607 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
NPM3O75607 DEFA7P-201ENST00000382676 285 ntBASIC2.8□□□□□ -1.96
NPM3O75607 RNA5SP227-201ENST00000516184 113 ntBASIC2.8□□□□□ -1.96
NPM3O75607 RNU6-548P-201ENST00000517083 115 ntBASIC2.8□□□□□ -1.96
NPM3O75607 MIR6715A-201ENST00000615929 79 ntBASIC2.8□□□□□ -1.96
NPM3O75607 MIR6828-201ENST00000636181 60 ntBASIC2.8□□□□□ -1.96
NPM3O75607 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NPM3O75607 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NPM3O75607 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NPM3O75607 snoU13.26-201ENST00000459452 105 ntBASIC2.79□□□□□ -1.96
NPM3O75607 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NPM3O75607 SNORA25-201ENST00000384384 134 ntBASIC2.78□□□□□ -1.96
NPM3O75607 MIR5694-201ENST00000581190 76 ntBASIC2.78□□□□□ -1.96
NPM3O75607 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC2.78□□□□□ -1.96
NPM3O75607 MIR582-201ENST00000365731 98 ntBASIC2.77□□□□□ -1.97
NPM3O75607 RNU6-1246P-201ENST00000391064 107 ntBASIC2.77□□□□□ -1.97
NPM3O75607 SNORD110-201ENST00000408189 75 ntBASIC2.77□□□□□ -1.97
NPM3O75607 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC2.77□□□□□ -1.97
NPM3O75607 RNU6-518P-201ENST00000516056 96 ntBASIC2.77□□□□□ -1.97
NPM3O75607 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC2.77□□□□□ -1.97
NPM3O75607 MIR548X-201ENST00000580069 75 ntBASIC2.77□□□□□ -1.97
NPM3O75607 MIR4473-201ENST00000583731 91 ntBASIC2.77□□□□□ -1.97
NPM3O75607 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
NPM3O75607 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.77□□□□□ -1.97
NPM3O75607 MIR527-201ENST00000385244 85 ntBASIC2.76□□□□□ -1.97
NPM3O75607 SNORA40.16-201ENST00000517238 121 ntBASIC2.76□□□□□ -1.97
NPM3O75607 HMGN2P38-201ENST00000423806 265 ntBASIC2.75□□□□□ -1.97
NPM3O75607 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NPM3O75607 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
NPM3O75607 MIR548AE1-201ENST00000583292 70 ntBASIC2.74□□□□□ -1.97
NPM3O75607 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
NPM3O75607 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
NPM3O75607 SNORD114-30-201ENST00000364448 72 ntBASIC2.73□□□□□ -1.97
NPM3O75607 RN7SL499P-201ENST00000481141 276 ntBASIC2.73□□□□□ -1.97
NPM3O75607 AC025627.3-201ENST00000582078 182 ntBASIC2.73□□□□□ -1.97
NPM3O75607 MIR504-201ENST00000385065 83 ntBASIC2.72□□□□□ -1.97
NPM3O75607 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
NPM3O75607 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.72□□□□□ -1.97
NPM3O75607 MIR21-201ENST00000362134 72 ntBASIC2.71□□□□□ -1.98
NPM3O75607 MIR516B1-201ENST00000385211 90 ntBASIC2.71□□□□□ -1.98
NPM3O75607 SNORA26.9-201ENST00000391322 122 ntBASIC2.71□□□□□ -1.98
NPM3O75607 MIR6766-201ENST00000622641 72 ntBASIC2.71□□□□□ -1.98
NPM3O75607 SNORA40B-201ENST00000385573 128 ntBASIC2.7□□□□□ -1.98
NPM3O75607 AC243829.6-201ENST00000612652 106 ntBASIC2.7□□□□□ -1.98
NPM3O75607 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.7□□□□□ -1.98
NPM3O75607 SNORD114-1-201ENST00000362705 72 ntBASIC2.69□□□□□ -1.98
NPM3O75607 MIR200A-201ENST00000384875 90 ntBASIC2.69□□□□□ -1.98
NPM3O75607 AL591806.2-201ENST00000433122 173 ntBASIC2.69□□□□□ -1.98
NPM3O75607 RNA5SP200-201ENST00000516360 103 ntBASIC2.69□□□□□ -1.98
NPM3O75607 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.69□□□□□ -1.98
NPM3O75607 Y_RNA.282-201ENST00000364793 102 ntBASIC2.68□□□□□ -1.98
NPM3O75607 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.68□□□□□ -1.98
NPM3O75607 MIR6733-201ENST00000635723 61 ntBASIC2.68□□□□□ -1.98
NPM3O75607 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.68□□□□□ -1.98
NPM3O75607 MIR219B-201ENST00000637023 88 ntBASIC2.67□□□□□ -1.98
NPM3O75607 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.66□□□□□ -1.98
NPM3O75607 MIR7843-201ENST00000622274 79 ntBASIC2.66□□□□□ -1.98
NPM3O75607 Z82195.2-201ENST00000612348 18351 ntBASIC2.66□□□□□ -1.98
NPM3O75607 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
NPM3O75607 RNU6-246P-201ENST00000384702 107 ntBASIC2.65□□□□□ -1.99
NPM3O75607 MIR144-201ENST00000384886 86 ntBASIC2.65□□□□□ -1.99
NPM3O75607 SNORA48.3-201ENST00000391081 134 ntBASIC2.65□□□□□ -1.99
NPM3O75607 SNORD2-201ENST00000459163 69 ntBASIC2.65□□□□□ -1.99
NPM3O75607 RNU6-237P-201ENST00000515985 71 ntBASIC2.65□□□□□ -1.99
NPM3O75607 MIR6873-201ENST00000622788 63 ntBASIC2.65□□□□□ -1.99
NPM3O75607 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.65□□□□□ -1.99
NPM3O75607 MIR429-201ENST00000362106 83 ntBASIC2.64□□□□□ -1.99
NPM3O75607 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NPM3O75607 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
NPM3O75607 MIR548F3-201ENST00000408509 87 ntBASIC2.64□□□□□ -1.99
NPM3O75607 RNA5SP268-201ENST00000516828 124 ntBASIC2.64□□□□□ -1.99
NPM3O75607 RNU4-45P-201ENST00000365469 141 ntBASIC2.63□□□□□ -1.99
NPM3O75607 MIR19B1-201ENST00000384829 87 ntBASIC2.63□□□□□ -1.99
NPM3O75607 MIR1255B2-201ENST00000408618 67 ntBASIC2.63□□□□□ -1.99
NPM3O75607 AC243829.3-201ENST00000622177 108 ntBASIC2.63□□□□□ -1.99
NPM3O75607 SNORA64-201ENST00000384674 134 ntBASIC2.62□□□□□ -1.99
NPM3O75607 AC244090.1-201ENST00000441884 93 ntBASIC2.62□□□□□ -1.99
NPM3O75607 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NPM3O75607 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NPM3O75607 MIR6073-201ENST00000352083 89 ntBASIC2.61□□□□□ -1.99
NPM3O75607 MIR20A-201ENST00000362279 71 ntBASIC2.61□□□□□ -1.99
NPM3O75607 MIR519A2-201ENST00000384990 87 ntBASIC2.61□□□□□ -1.99
NPM3O75607 snoU13.23-201ENST00000458863 104 ntBASIC2.61□□□□□ -1.99
NPM3O75607 RNA5SP327-201ENST00000362494 101 ntBASIC2.6□□□□□ -1.99
NPM3O75607 RNU6-810P-201ENST00000364001 107 ntBASIC2.6□□□□□ -1.99
NPM3O75607 MIR6132-201ENST00000622083 109 ntBASIC2.6□□□□□ -1.99
NPM3O75607 MIR1289-2-201ENST00000408360 111 ntBASIC2.59□□□□□ -1.99
NPM3O75607 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NPM3O75607 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 317.3 ms