Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 SCARNA16.5-201ENST00000517114 183 ntBASIC0.78□□□□□ -2.28
PROM1O43490 MIR4714-201ENST00000580728 77 ntBASIC0.78□□□□□ -2.28
PROM1O43490 MIR3920-201ENST00000581751 86 ntBASIC0.78□□□□□ -2.28
PROM1O43490 MTRNR2L2-201ENST00000604882 87 ntBASIC0.78□□□□□ -2.28
PROM1O43490 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.78□□□□□ -2.28
PROM1O43490 MIR1245B-201ENST00000636115 69 ntBASIC0.78□□□□□ -2.28
PROM1O43490 AC010487.4-201ENST00000637027 61 ntBASIC0.78□□□□□ -2.28
PROM1O43490 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
PROM1O43490 SNORD114-23-201ENST00000363536 72 ntBASIC0.77□□□□□ -2.29
PROM1O43490 MIR451A-201ENST00000385059 72 ntBASIC0.77□□□□□ -2.29
PROM1O43490 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
PROM1O43490 Y_RNA.607-201ENST00000410597 98 ntBASIC0.77□□□□□ -2.29
PROM1O43490 MIR2113-201ENST00000459007 91 ntBASIC0.77□□□□□ -2.29
PROM1O43490 RNU7-171P-201ENST00000459581 62 ntBASIC0.77□□□□□ -2.29
PROM1O43490 FGF7P7-201ENST00000514120 227 ntBASIC0.77□□□□□ -2.29
PROM1O43490 RNA5SP94-201ENST00000516917 108 ntBASIC0.77□□□□□ -2.29
PROM1O43490 RNA5SP257-201ENST00000363023 116 ntBASIC0.76□□□□□ -2.29
PROM1O43490 RNU6-1126P-201ENST00000384002 107 ntBASIC0.76□□□□□ -2.29
PROM1O43490 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
PROM1O43490 RNU6-1052P-201ENST00000411398 104 ntBASIC0.75□□□□□ -2.29
PROM1O43490 RNU6-719P-201ENST00000516671 104 ntBASIC0.75□□□□□ -2.29
PROM1O43490 AC140658.3-201ENST00000567603 271 ntBASIC0.75□□□□□ -2.29
PROM1O43490 MIR6513-201ENST00000621188 64 ntBASIC0.75□□□□□ -2.29
PROM1O43490 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
PROM1O43490 Y_RNA.219-201ENST00000364232 113 ntBASIC0.74□□□□□ -2.29
PROM1O43490 RNY4P3-201ENST00000365254 95 ntBASIC0.74□□□□□ -2.29
PROM1O43490 RNU6-1051P-201ENST00000365471 102 ntBASIC0.74□□□□□ -2.29
PROM1O43490 RNU6-652P-201ENST00000365488 107 ntBASIC0.74□□□□□ -2.29
PROM1O43490 SNORD90-201ENST00000391145 111 ntBASIC0.74□□□□□ -2.29
PROM1O43490 RNA5SP268-201ENST00000516828 124 ntBASIC0.74□□□□□ -2.29
PROM1O43490 MIR548AG2-201ENST00000581228 64 ntBASIC0.74□□□□□ -2.29
PROM1O43490 RNU5F-1-201ENST00000362507 117 ntBASIC0.73□□□□□ -2.29
PROM1O43490 SNORA36.1-201ENST00000363424 132 ntBASIC0.73□□□□□ -2.29
PROM1O43490 RNU6-726P-201ENST00000364680 107 ntBASIC0.73□□□□□ -2.29
PROM1O43490 RNU6-1124P-201ENST00000384169 107 ntBASIC0.73□□□□□ -2.29
PROM1O43490 MIR140-201ENST00000385282 100 ntBASIC0.73□□□□□ -2.29
PROM1O43490 RNU7-74P-201ENST00000459104 62 ntBASIC0.73□□□□□ -2.29
PROM1O43490 MIR3140-201ENST00000583685 90 ntBASIC0.73□□□□□ -2.29
PROM1O43490 AL109933.3-201ENST00000619095 188 ntBASIC0.73□□□□□ -2.29
PROM1O43490 MIR3202-2-201ENST00000635980 79 ntBASIC0.73□□□□□ -2.29
PROM1O43490 MIR617-201ENST00000385030 97 ntBASIC0.72□□□□□ -2.29
PROM1O43490 SNORD41.1-201ENST00000391000 69 ntBASIC0.72□□□□□ -2.29
PROM1O43490 MIR936-201ENST00000401264 98 ntBASIC0.72□□□□□ -2.29
PROM1O43490 Y_RNA.316-201ENST00000365118 111 ntBASIC0.71□□□□□ -2.3
PROM1O43490 MIR519E-201ENST00000385075 84 ntBASIC0.71□□□□□ -2.3
PROM1O43490 AL450471.1-201ENST00000447509 127 ntBASIC0.71□□□□□ -2.3
PROM1O43490 RNU6-1108P-201ENST00000516308 104 ntBASIC0.71□□□□□ -2.3
PROM1O43490 MIR8087-201ENST00000612745 78 ntBASIC0.71□□□□□ -2.3
PROM1O43490 RNU6-161P-201ENST00000363051 106 ntBASIC0.7□□□□□ -2.3
PROM1O43490 Y_RNA.313-201ENST00000365095 103 ntBASIC0.7□□□□□ -2.3
PROM1O43490 SNORD78.1-201ENST00000390866 65 ntBASIC0.7□□□□□ -2.3
PROM1O43490 MIR4666B-201ENST00000578142 81 ntBASIC0.7□□□□□ -2.3
PROM1O43490 AC092634.7-201ENST00000621022 103 ntBASIC0.7□□□□□ -2.3
PROM1O43490 MIR6828-201ENST00000636181 60 ntBASIC0.7□□□□□ -2.3
PROM1O43490 SNORA63.2-201ENST00000362603 126 ntBASIC0.69□□□□□ -2.3
PROM1O43490 RNU6-228P-201ENST00000362700 106 ntBASIC0.69□□□□□ -2.3
PROM1O43490 RNA5SP517-201ENST00000364724 117 ntBASIC0.69□□□□□ -2.3
PROM1O43490 SNORA8.2-201ENST00000384372 139 ntBASIC0.69□□□□□ -2.3
PROM1O43490 RNU6-129P-201ENST00000391022 107 ntBASIC0.69□□□□□ -2.3
PROM1O43490 RNU6-269P-201ENST00000391077 97 ntBASIC0.69□□□□□ -2.3
PROM1O43490 RNA5SP121-201ENST00000516537 101 ntBASIC0.69□□□□□ -2.3
PROM1O43490 MIR7107-201ENST00000611489 80 ntBASIC0.69□□□□□ -2.3
PROM1O43490 MIR6835-201ENST00000621552 64 ntBASIC0.69□□□□□ -2.3
PROM1O43490 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
PROM1O43490 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
PROM1O43490 RNU6-208P-201ENST00000362431 107 ntBASIC0.68□□□□□ -2.3
PROM1O43490 RNU6-787P-201ENST00000384032 107 ntBASIC0.68□□□□□ -2.3
PROM1O43490 SNORD77.2-201ENST00000391045 68 ntBASIC0.68□□□□□ -2.3
PROM1O43490 MIR1255A-201ENST00000408338 113 ntBASIC0.68□□□□□ -2.3
PROM1O43490 RNA5SP330-201ENST00000517096 96 ntBASIC0.68□□□□□ -2.3
PROM1O43490 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.68□□□□□ -2.3
PROM1O43490 SNORA25.18-201ENST00000607153 114 ntBASIC0.68□□□□□ -2.3
PROM1O43490 RNU6-624P-201ENST00000363411 107 ntBASIC0.67□□□□□ -2.3
PROM1O43490 MIR508-201ENST00000384857 115 ntBASIC0.67□□□□□ -2.3
PROM1O43490 U3.27-201ENST00000391237 200 ntBASIC0.67□□□□□ -2.3
PROM1O43490 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
PROM1O43490 SNORD71-201ENST00000411292 86 ntBASIC0.67□□□□□ -2.3
PROM1O43490 snoU13.17-201ENST00000458802 104 ntBASIC0.67□□□□□ -2.3
PROM1O43490 MIR330-201ENST00000362196 94 ntBASIC0.66□□□□□ -2.3
PROM1O43490 MIR216B-201ENST00000390186 82 ntBASIC0.66□□□□□ -2.3
PROM1O43490 HAR1A.1-201ENST00000459583 118 ntBASIC0.66□□□□□ -2.3
PROM1O43490 MIR4460-201ENST00000577862 86 ntBASIC0.66□□□□□ -2.3
PROM1O43490 RNA5SP225-201ENST00000410874 135 ntBASIC0.65□□□□□ -2.31
PROM1O43490 RNA5SP484-201ENST00000458857 111 ntBASIC0.65□□□□□ -2.31
PROM1O43490 AL162376.1-201ENST00000624117 175 ntBASIC0.65□□□□□ -2.31
PROM1O43490 RNU6-478P-201ENST00000363904 110 ntBASIC0.64□□□□□ -2.31
PROM1O43490 Y_RNA.258-201ENST00000364613 105 ntBASIC0.64□□□□□ -2.31
PROM1O43490 RNU6-35P-201ENST00000384530 107 ntBASIC0.64□□□□□ -2.31
PROM1O43490 RNA5SP193-201ENST00000410353 107 ntBASIC0.64□□□□□ -2.31
PROM1O43490 SNORA40.8-201ENST00000411034 126 ntBASIC0.64□□□□□ -2.31
PROM1O43490 Y_RNA.660-201ENST00000516002 120 ntBASIC0.64□□□□□ -2.31
PROM1O43490 NAMPTP3-201ENST00000569273 224 ntBASIC0.64□□□□□ -2.31
PROM1O43490 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.64□□□□□ -2.31
PROM1O43490 RNU1-141P-201ENST00000364623 158 ntBASIC0.63□□□□□ -2.31
PROM1O43490 Y_RNA.264-201ENST00000364665 102 ntBASIC0.63□□□□□ -2.31
PROM1O43490 RNU6-686P-201ENST00000364839 107 ntBASIC0.63□□□□□ -2.31
PROM1O43490 Y_RNA.371-201ENST00000365591 113 ntBASIC0.63□□□□□ -2.31
PROM1O43490 RNU6-380P-201ENST00000410207 107 ntBASIC0.63□□□□□ -2.31
PROM1O43490 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.63□□□□□ -2.31
PROM1O43490 RNA5SP476-201ENST00000516613 103 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms