Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 MIR532-201ENST00000385025 91 ntBASIC1.2□□□□□ -2.22
FOXN1O15353 RNU6-634P-201ENST00000459134 106 ntBASIC1.2□□□□□ -2.22
FOXN1O15353 SNORD79.1-201ENST00000516069 84 ntBASIC1.2□□□□□ -2.22
FOXN1O15353 RNU6-871P-201ENST00000516122 100 ntBASIC1.2□□□□□ -2.22
FOXN1O15353 RNU6-977P-201ENST00000516411 103 ntBASIC1.2□□□□□ -2.22
FOXN1O15353 MIR2909-201ENST00000617113 69 ntBASIC1.2□□□□□ -2.22
FOXN1O15353 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.19□□□□□ -2.22
FOXN1O15353 RNU6-590P-201ENST00000365039 107 ntBASIC1.19□□□□□ -2.22
FOXN1O15353 SNORA8.1-201ENST00000384250 140 ntBASIC1.19□□□□□ -2.22
FOXN1O15353 RNU6-154P-201ENST00000384306 106 ntBASIC1.19□□□□□ -2.22
FOXN1O15353 MIR451A-201ENST00000385059 72 ntBASIC1.19□□□□□ -2.22
FOXN1O15353 RNU6-587P-201ENST00000391282 106 ntBASIC1.19□□□□□ -2.22
FOXN1O15353 RNU6-935P-201ENST00000410371 100 ntBASIC1.19□□□□□ -2.22
FOXN1O15353 RNU6-994P-201ENST00000410507 111 ntBASIC1.19□□□□□ -2.22
FOXN1O15353 AC244505.6-201ENST00000452829 130 ntBASIC1.19□□□□□ -2.22
FOXN1O15353 RNU7-90P-201ENST00000459216 62 ntBASIC1.19□□□□□ -2.22
FOXN1O15353 RNU6-539P-201ENST00000516665 103 ntBASIC1.19□□□□□ -2.22
FOXN1O15353 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.19□□□□□ -2.22
FOXN1O15353 SNORA24B-201ENST00000384176 131 ntBASIC1.18□□□□□ -2.22
FOXN1O15353 MIR100-201ENST00000385259 80 ntBASIC1.18□□□□□ -2.22
FOXN1O15353 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
FOXN1O15353 MIR942-201ENST00000401111 86 ntBASIC1.18□□□□□ -2.22
FOXN1O15353 MIR2113-201ENST00000459007 91 ntBASIC1.18□□□□□ -2.22
FOXN1O15353 RNU6-287P-201ENST00000516230 98 ntBASIC1.18□□□□□ -2.22
FOXN1O15353 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
FOXN1O15353 MIR1-1-201ENST00000362147 71 ntBASIC1.17□□□□□ -2.22
FOXN1O15353 RNU6-824P-201ENST00000363724 104 ntBASIC1.17□□□□□ -2.22
FOXN1O15353 RNU6-1241P-201ENST00000384536 107 ntBASIC1.17□□□□□ -2.22
FOXN1O15353 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
FOXN1O15353 RNU1-119P-201ENST00000391122 165 ntBASIC1.17□□□□□ -2.22
FOXN1O15353 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.17□□□□□ -2.22
FOXN1O15353 AC097510.1-201ENST00000510945 133 ntBASIC1.17□□□□□ -2.22
FOXN1O15353 SNORA31.14-201ENST00000516728 116 ntBASIC1.17□□□□□ -2.22
FOXN1O15353 Y_RNA.32-201ENST00000362589 110 ntBASIC1.16□□□□□ -2.22
FOXN1O15353 RNU6-540P-201ENST00000384622 101 ntBASIC1.16□□□□□ -2.22
FOXN1O15353 MIR520F-201ENST00000384824 87 ntBASIC1.16□□□□□ -2.22
FOXN1O15353 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
FOXN1O15353 RNA5SP193-201ENST00000410353 107 ntBASIC1.16□□□□□ -2.22
FOXN1O15353 RNU2-59P-201ENST00000410482 191 ntBASIC1.16□□□□□ -2.22
FOXN1O15353 Y_RNA.606-201ENST00000410579 103 ntBASIC1.16□□□□□ -2.22
FOXN1O15353 MIR4698-201ENST00000577795 80 ntBASIC1.16□□□□□ -2.22
FOXN1O15353 uc_338.16-201ENST00000621804 95 ntBASIC1.16□□□□□ -2.22
FOXN1O15353 SNORD115-31-201ENST00000365318 82 ntBASIC1.15□□□□□ -2.23
FOXN1O15353 SNORA70.22-201ENST00000517160 124 ntBASIC1.15□□□□□ -2.23
FOXN1O15353 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
FOXN1O15353 RNA5SP327-201ENST00000362494 101 ntBASIC1.14□□□□□ -2.23
FOXN1O15353 RNU6-681P-201ENST00000364012 104 ntBASIC1.14□□□□□ -2.23
FOXN1O15353 RNU4-38P-201ENST00000364472 129 ntBASIC1.14□□□□□ -2.23
FOXN1O15353 RNU6-649P-201ENST00000384463 107 ntBASIC1.14□□□□□ -2.23
FOXN1O15353 MIR154-201ENST00000385243 84 ntBASIC1.14□□□□□ -2.23
FOXN1O15353 SNORD30.1-201ENST00000391309 70 ntBASIC1.14□□□□□ -2.23
FOXN1O15353 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.14□□□□□ -2.23
FOXN1O15353 MIR3675-201ENST00000583661 73 ntBASIC1.14□□□□□ -2.23
FOXN1O15353 U6.81-201ENST00000612550 106 ntBASIC1.14□□□□□ -2.23
FOXN1O15353 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.14□□□□□ -2.23
FOXN1O15353 SNORD115-24-201ENST00000363528 82 ntBASIC1.13□□□□□ -2.23
FOXN1O15353 MIR1827-201ENST00000408549 66 ntBASIC1.13□□□□□ -2.23
FOXN1O15353 AC002429.1-201ENST00000437672 148 ntBASIC1.13□□□□□ -2.23
FOXN1O15353 RNU6-1057P-201ENST00000517162 102 ntBASIC1.13□□□□□ -2.23
FOXN1O15353 MIR548AG2-201ENST00000581228 64 ntBASIC1.13□□□□□ -2.23
FOXN1O15353 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
FOXN1O15353 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.13□□□□□ -2.23
FOXN1O15353 RNA5SP403-201ENST00000363598 108 ntBASIC1.12□□□□□ -2.23
FOXN1O15353 SNORA25-201ENST00000384384 134 ntBASIC1.12□□□□□ -2.23
FOXN1O15353 SNORD12-201ENST00000391002 90 ntBASIC1.12□□□□□ -2.23
FOXN1O15353 RNU6-1177P-201ENST00000391058 104 ntBASIC1.12□□□□□ -2.23
FOXN1O15353 RNU7-13P-201ENST00000516413 62 ntBASIC1.12□□□□□ -2.23
FOXN1O15353 RNU7-161P-201ENST00000517289 62 ntBASIC1.12□□□□□ -2.23
FOXN1O15353 MIR26B-201ENST00000362251 77 ntBASIC1.11□□□□□ -2.23
FOXN1O15353 Y_RNA.174-201ENST00000363781 105 ntBASIC1.11□□□□□ -2.23
FOXN1O15353 SNORD115-44-201ENST00000365391 82 ntBASIC1.11□□□□□ -2.23
FOXN1O15353 Y_RNA.386-201ENST00000383913 105 ntBASIC1.11□□□□□ -2.23
FOXN1O15353 MIR618-201ENST00000385287 98 ntBASIC1.11□□□□□ -2.23
FOXN1O15353 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
FOXN1O15353 U3.27-201ENST00000391237 200 ntBASIC1.11□□□□□ -2.23
FOXN1O15353 AC067940.1-201ENST00000458411 300 ntBASIC1.11□□□□□ -2.23
FOXN1O15353 MIR4773-1-201ENST00000637203 78 ntBASIC1.11□□□□□ -2.23
FOXN1O15353 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
FOXN1O15353 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
FOXN1O15353 RNU6-382P-201ENST00000365181 106 ntBASIC1.1□□□□□ -2.23
FOXN1O15353 Y_RNA.340-201ENST00000365330 92 ntBASIC1.1□□□□□ -2.23
FOXN1O15353 MIR4711-201ENST00000578274 70 ntBASIC1.1□□□□□ -2.23
FOXN1O15353 MIR3920-201ENST00000581751 86 ntBASIC1.1□□□□□ -2.23
FOXN1O15353 AL136317.1-201ENST00000612653 226 ntBASIC1.1□□□□□ -2.23
FOXN1O15353 SNORD45.1-201ENST00000363181 77 ntBASIC1.09□□□□□ -2.23
FOXN1O15353 RNU6-1126P-201ENST00000384002 107 ntBASIC1.09□□□□□ -2.23
FOXN1O15353 SNORD45A-201ENST00000384512 84 ntBASIC1.09□□□□□ -2.23
FOXN1O15353 MIR19B1-201ENST00000384829 87 ntBASIC1.09□□□□□ -2.23
FOXN1O15353 MIR644A-201ENST00000385262 94 ntBASIC1.09□□□□□ -2.23
FOXN1O15353 RNU6-663P-201ENST00000391105 106 ntBASIC1.09□□□□□ -2.23
FOXN1O15353 MIR1265-201ENST00000408444 86 ntBASIC1.09□□□□□ -2.23
FOXN1O15353 AC125388.1-201ENST00000459631 156 ntBASIC1.09□□□□□ -2.23
FOXN1O15353 RNU1-124P-201ENST00000363861 145 ntBASIC1.08□□□□□ -2.24
FOXN1O15353 RNU6-800P-201ENST00000384473 103 ntBASIC1.08□□□□□ -2.24
FOXN1O15353 RNU7-104P-201ENST00000459398 79 ntBASIC1.08□□□□□ -2.24
FOXN1O15353 AC002350.1-201ENST00000490759 375 ntBASIC1.08□□□□□ -2.24
FOXN1O15353 RNA5SP285-201ENST00000516619 119 ntBASIC1.08□□□□□ -2.24
FOXN1O15353 AC103810.9-201ENST00000606688 112 ntBASIC1.08□□□□□ -2.24
FOXN1O15353 U6.111-201ENST00000636093 83 ntBASIC1.08□□□□□ -2.24
FOXN1O15353 SNORD115-22-201ENST00000364456 82 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms