Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 RNU6-158P-201ENST00000517104 100 ntBASIC0.26□□□□□ -2.37
CDX4O14627 AC026421.1-201ENST00000519101 163 ntBASIC0.26□□□□□ -2.37
CDX4O14627 MTRNR2L2-201ENST00000604882 87 ntBASIC0.26□□□□□ -2.37
CDX4O14627 RNU1-29P-201ENST00000606574 126 ntBASIC0.26□□□□□ -2.37
CDX4O14627 SNORA70.25-201ENST00000612741 95 ntBASIC0.26□□□□□ -2.37
CDX4O14627 MIR6755-201ENST00000619993 66 ntBASIC0.26□□□□□ -2.37
CDX4O14627 MIR2052-201ENST00000636055 55 ntBASIC0.26□□□□□ -2.37
CDX4O14627 SNORD116-10-201ENST00000363791 102 ntBASIC0.25□□□□□ -2.37
CDX4O14627 SNORD115-44-201ENST00000365391 82 ntBASIC0.25□□□□□ -2.37
CDX4O14627 MIR519E-201ENST00000385075 84 ntBASIC0.25□□□□□ -2.37
CDX4O14627 Y_RNA.609-201ENST00000410669 89 ntBASIC0.25□□□□□ -2.37
CDX4O14627 RNA5SP484-201ENST00000458857 111 ntBASIC0.25□□□□□ -2.37
CDX4O14627 RNU6-1232P-201ENST00000516299 86 ntBASIC0.25□□□□□ -2.37
CDX4O14627 Y_RNA.677-201ENST00000516401 85 ntBASIC0.25□□□□□ -2.37
CDX4O14627 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
CDX4O14627 MIR488-201ENST00000365739 83 ntBASIC0.24□□□□□ -2.37
CDX4O14627 RNU6-132P-201ENST00000383863 107 ntBASIC0.24□□□□□ -2.37
CDX4O14627 MIR617-201ENST00000385030 97 ntBASIC0.24□□□□□ -2.37
CDX4O14627 MIR5190-201ENST00000581537 80 ntBASIC0.24□□□□□ -2.37
CDX4O14627 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.24□□□□□ -2.37
CDX4O14627 RNU6-815P-201ENST00000384080 113 ntBASIC0.23□□□□□ -2.37
CDX4O14627 NAMPTP3-201ENST00000569273 224 ntBASIC0.23□□□□□ -2.37
CDX4O14627 MALAT1.1-201ENST00000618249 95 ntBASIC0.23□□□□□ -2.37
CDX4O14627 RNU4-32P-201ENST00000363404 141 ntBASIC0.22□□□□□ -2.37
CDX4O14627 RNU6-509P-201ENST00000363519 107 ntBASIC0.22□□□□□ -2.37
CDX4O14627 Y_RNA.239-201ENST00000364444 113 ntBASIC0.22□□□□□ -2.37
CDX4O14627 RNU1-141P-201ENST00000364623 158 ntBASIC0.22□□□□□ -2.37
CDX4O14627 SNORA2A-201ENST00000383885 135 ntBASIC0.22□□□□□ -2.37
CDX4O14627 RNY1P7-201ENST00000384743 110 ntBASIC0.22□□□□□ -2.37
CDX4O14627 RNU7-74P-201ENST00000459104 62 ntBASIC0.22□□□□□ -2.37
CDX4O14627 MIR3064-201ENST00000581130 66 ntBASIC0.22□□□□□ -2.37
CDX4O14627 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
CDX4O14627 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.22□□□□□ -2.37
CDX4O14627 MIR760-201ENST00000390220 80 ntBASIC0.21□□□□□ -2.38
CDX4O14627 RNA5SP292-201ENST00000390974 118 ntBASIC0.21□□□□□ -2.38
CDX4O14627 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
CDX4O14627 SNORD110-201ENST00000408189 75 ntBASIC0.21□□□□□ -2.38
CDX4O14627 RNU6-1052P-201ENST00000411398 104 ntBASIC0.21□□□□□ -2.38
CDX4O14627 AC073261.1-201ENST00000429409 121 ntBASIC0.21□□□□□ -2.38
CDX4O14627 AC093423.1-201ENST00000440817 142 ntBASIC0.21□□□□□ -2.38
CDX4O14627 RNU6-719P-201ENST00000516671 104 ntBASIC0.21□□□□□ -2.38
CDX4O14627 MIR4636-201ENST00000582271 80 ntBASIC0.21□□□□□ -2.38
CDX4O14627 AC104996.3-201ENST00000590718 94 ntBASIC0.21□□□□□ -2.38
CDX4O14627 AC073869.9-201ENST00000641610 120 ntBASIC0.21□□□□□ -2.38
CDX4O14627 RNU6-811P-201ENST00000384069 107 ntBASIC0.2□□□□□ -2.38
CDX4O14627 MIR451A-201ENST00000385059 72 ntBASIC0.2□□□□□ -2.38
CDX4O14627 RNU6-935P-201ENST00000410371 100 ntBASIC0.2□□□□□ -2.38
CDX4O14627 AC006210.1-201ENST00000424882 111 ntBASIC0.2□□□□□ -2.38
CDX4O14627 RNU7-129P-201ENST00000516128 62 ntBASIC0.2□□□□□ -2.38
CDX4O14627 RNU6-1057P-201ENST00000517162 102 ntBASIC0.2□□□□□ -2.38
CDX4O14627 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.2□□□□□ -2.38
CDX4O14627 MIR499B-201ENST00000636498 73 ntBASIC0.2□□□□□ -2.38
CDX4O14627 RNU6-1131P-201ENST00000364955 107 ntBASIC0.19□□□□□ -2.38
CDX4O14627 RNA5SP128-201ENST00000365305 116 ntBASIC0.19□□□□□ -2.38
CDX4O14627 Y_RNA.491-201ENST00000384417 107 ntBASIC0.19□□□□□ -2.38
CDX4O14627 MIR548U-201ENST00000390728 81 ntBASIC0.19□□□□□ -2.38
CDX4O14627 RNY4P30-201ENST00000410216 95 ntBASIC0.19□□□□□ -2.38
CDX4O14627 AC108740.1-201ENST00000498629 225 ntBASIC0.19□□□□□ -2.38
CDX4O14627 FGF7P7-201ENST00000514120 227 ntBASIC0.19□□□□□ -2.38
CDX4O14627 MIR4460-201ENST00000577862 86 ntBASIC0.19□□□□□ -2.38
CDX4O14627 MIR5706-201ENST00000579841 80 ntBASIC0.19□□□□□ -2.38
CDX4O14627 RNU6-49P-201ENST00000384256 107 ntBASIC0.18□□□□□ -2.38
CDX4O14627 SNORD90-201ENST00000391145 111 ntBASIC0.18□□□□□ -2.38
CDX4O14627 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.18□□□□□ -2.38
CDX4O14627 HMGN2P22-201ENST00000427588 175 ntBASIC0.18□□□□□ -2.38
CDX4O14627 SNORA18.5-201ENST00000516616 101 ntBASIC0.18□□□□□ -2.38
CDX4O14627 RNU5B-6P-201ENST00000516765 68 ntBASIC0.18□□□□□ -2.38
CDX4O14627 AC069113.3-201ENST00000521019 150 ntBASIC0.18□□□□□ -2.38
CDX4O14627 YWHAEP2-201ENST00000580066 112 ntBASIC0.18□□□□□ -2.38
CDX4O14627 MIR5093-201ENST00000583199 100 ntBASIC0.18□□□□□ -2.38
CDX4O14627 MIR3140-201ENST00000583685 90 ntBASIC0.18□□□□□ -2.38
CDX4O14627 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.18□□□□□ -2.38
CDX4O14627 SNORA9.1-201ENST00000362412 131 ntBASIC0.17□□□□□ -2.38
CDX4O14627 Y_RNA.220-201ENST00000364244 109 ntBASIC0.17□□□□□ -2.38
CDX4O14627 SNORD115-27-201ENST00000364430 82 ntBASIC0.17□□□□□ -2.38
CDX4O14627 MT-TY-201ENST00000387409 66 ntBASIC0.17□□□□□ -2.38
CDX4O14627 MIR501-201ENST00000390204 84 ntBASIC0.17□□□□□ -2.38
CDX4O14627 MIR1265-201ENST00000408444 86 ntBASIC0.17□□□□□ -2.38
CDX4O14627 RNU6-848P-201ENST00000515948 107 ntBASIC0.17□□□□□ -2.38
CDX4O14627 RNU6-617P-201ENST00000516147 107 ntBASIC0.17□□□□□ -2.38
CDX4O14627 RNU6-473P-201ENST00000516164 107 ntBASIC0.17□□□□□ -2.38
CDX4O14627 RNU6-1049P-201ENST00000516414 107 ntBASIC0.17□□□□□ -2.38
CDX4O14627 RNU7-153P-201ENST00000516455 62 ntBASIC0.17□□□□□ -2.38
CDX4O14627 MIR4668-201ENST00000582284 70 ntBASIC0.17□□□□□ -2.38
CDX4O14627 MIR4473-201ENST00000583731 91 ntBASIC0.17□□□□□ -2.38
CDX4O14627 RNU6-1051P-201ENST00000365471 102 ntBASIC0.16□□□□□ -2.38
CDX4O14627 RNU6-402P-201ENST00000410678 103 ntBASIC0.16□□□□□ -2.38
CDX4O14627 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.16□□□□□ -2.38
CDX4O14627 AC069503.3-201ENST00000618674 145 ntBASIC0.16□□□□□ -2.38
CDX4O14627 MIR4315-1-201ENST00000636800 73 ntBASIC0.16□□□□□ -2.38
CDX4O14627 MIR4315-2-201ENST00000640925 73 ntBASIC0.16□□□□□ -2.38
CDX4O14627 Y_RNA.125-201ENST00000363371 111 ntBASIC0.15□□□□□ -2.39
CDX4O14627 RNU6V-201ENST00000384105 107 ntBASIC0.15□□□□□ -2.39
CDX4O14627 SNORD116-22-201ENST00000384430 92 ntBASIC0.15□□□□□ -2.39
CDX4O14627 RNU6-127P-201ENST00000390897 107 ntBASIC0.15□□□□□ -2.39
CDX4O14627 RNU6-267P-201ENST00000516714 103 ntBASIC0.15□□□□□ -2.39
CDX4O14627 RNU6-844P-201ENST00000517175 102 ntBASIC0.15□□□□□ -2.39
CDX4O14627 MIR5589-201ENST00000579442 60 ntBASIC0.15□□□□□ -2.39
CDX4O14627 MIR548O2-201ENST00000616090 70 ntBASIC0.15□□□□□ -2.39
CDX4O14627 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 211.7 ms