Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 RNU6-158P-201ENST00000517104 100 ntBASIC0.26□□□□□ -2.37
CDX4O14627 AC026421.1-201ENST00000519101 163 ntBASIC0.26□□□□□ -2.37
CDX4O14627 MTRNR2L2-201ENST00000604882 87 ntBASIC0.26□□□□□ -2.37
CDX4O14627 RNU1-29P-201ENST00000606574 126 ntBASIC0.26□□□□□ -2.37
CDX4O14627 SNORA70.25-201ENST00000612741 95 ntBASIC0.26□□□□□ -2.37
CDX4O14627 MIR6755-201ENST00000619993 66 ntBASIC0.26□□□□□ -2.37
CDX4O14627 MIR2052-201ENST00000636055 55 ntBASIC0.26□□□□□ -2.37
CDX4O14627 SNORD116-10-201ENST00000363791 102 ntBASIC0.25□□□□□ -2.37
CDX4O14627 SNORD115-44-201ENST00000365391 82 ntBASIC0.25□□□□□ -2.37
CDX4O14627 MIR519E-201ENST00000385075 84 ntBASIC0.25□□□□□ -2.37
CDX4O14627 Y_RNA.609-201ENST00000410669 89 ntBASIC0.25□□□□□ -2.37
CDX4O14627 RNA5SP484-201ENST00000458857 111 ntBASIC0.25□□□□□ -2.37
CDX4O14627 RNU6-1232P-201ENST00000516299 86 ntBASIC0.25□□□□□ -2.37
CDX4O14627 Y_RNA.677-201ENST00000516401 85 ntBASIC0.25□□□□□ -2.37
CDX4O14627 RNA5SP134-201ENST00000516492 96 ntBASIC0.25□□□□□ -2.37
CDX4O14627 MIR488-201ENST00000365739 83 ntBASIC0.24□□□□□ -2.37
CDX4O14627 RNU6-132P-201ENST00000383863 107 ntBASIC0.24□□□□□ -2.37
CDX4O14627 MIR617-201ENST00000385030 97 ntBASIC0.24□□□□□ -2.37
CDX4O14627 MIR5190-201ENST00000581537 80 ntBASIC0.24□□□□□ -2.37
CDX4O14627 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.24□□□□□ -2.37
CDX4O14627 RNU6-815P-201ENST00000384080 113 ntBASIC0.23□□□□□ -2.37
CDX4O14627 NAMPTP3-201ENST00000569273 224 ntBASIC0.23□□□□□ -2.37
CDX4O14627 MALAT1.1-201ENST00000618249 95 ntBASIC0.23□□□□□ -2.37
CDX4O14627 RNU4-32P-201ENST00000363404 141 ntBASIC0.22□□□□□ -2.37
CDX4O14627 RNU6-509P-201ENST00000363519 107 ntBASIC0.22□□□□□ -2.37
CDX4O14627 Y_RNA.239-201ENST00000364444 113 ntBASIC0.22□□□□□ -2.37
CDX4O14627 RNU1-141P-201ENST00000364623 158 ntBASIC0.22□□□□□ -2.37
CDX4O14627 SNORA2A-201ENST00000383885 135 ntBASIC0.22□□□□□ -2.37
CDX4O14627 RNY1P7-201ENST00000384743 110 ntBASIC0.22□□□□□ -2.37
CDX4O14627 RNU7-74P-201ENST00000459104 62 ntBASIC0.22□□□□□ -2.37
CDX4O14627 MIR3064-201ENST00000581130 66 ntBASIC0.22□□□□□ -2.37
CDX4O14627 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
CDX4O14627 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.22□□□□□ -2.37
CDX4O14627 MIR760-201ENST00000390220 80 ntBASIC0.21□□□□□ -2.38
CDX4O14627 RNA5SP292-201ENST00000390974 118 ntBASIC0.21□□□□□ -2.38
CDX4O14627 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
CDX4O14627 SNORD110-201ENST00000408189 75 ntBASIC0.21□□□□□ -2.38
CDX4O14627 RNU6-1052P-201ENST00000411398 104 ntBASIC0.21□□□□□ -2.38
CDX4O14627 AC073261.1-201ENST00000429409 121 ntBASIC0.21□□□□□ -2.38
CDX4O14627 AC093423.1-201ENST00000440817 142 ntBASIC0.21□□□□□ -2.38
CDX4O14627 RNU6-719P-201ENST00000516671 104 ntBASIC0.21□□□□□ -2.38
CDX4O14627 MIR4636-201ENST00000582271 80 ntBASIC0.21□□□□□ -2.38
CDX4O14627 AC104996.3-201ENST00000590718 94 ntBASIC0.21□□□□□ -2.38
CDX4O14627 AC073869.9-201ENST00000641610 120 ntBASIC0.21□□□□□ -2.38
CDX4O14627 RNU6-811P-201ENST00000384069 107 ntBASIC0.2□□□□□ -2.38
CDX4O14627 MIR451A-201ENST00000385059 72 ntBASIC0.2□□□□□ -2.38
CDX4O14627 RNU6-935P-201ENST00000410371 100 ntBASIC0.2□□□□□ -2.38
CDX4O14627 AC006210.1-201ENST00000424882 111 ntBASIC0.2□□□□□ -2.38
CDX4O14627 RNU7-129P-201ENST00000516128 62 ntBASIC0.2□□□□□ -2.38
CDX4O14627 RNU6-1057P-201ENST00000517162 102 ntBASIC0.2□□□□□ -2.38
CDX4O14627 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.2□□□□□ -2.38
CDX4O14627 MIR499B-201ENST00000636498 73 ntBASIC0.2□□□□□ -2.38
CDX4O14627 RNU6-1131P-201ENST00000364955 107 ntBASIC0.19□□□□□ -2.38
CDX4O14627 RNA5SP128-201ENST00000365305 116 ntBASIC0.19□□□□□ -2.38
CDX4O14627 Y_RNA.491-201ENST00000384417 107 ntBASIC0.19□□□□□ -2.38
CDX4O14627 MIR548U-201ENST00000390728 81 ntBASIC0.19□□□□□ -2.38
CDX4O14627 RNY4P30-201ENST00000410216 95 ntBASIC0.19□□□□□ -2.38
CDX4O14627 AC108740.1-201ENST00000498629 225 ntBASIC0.19□□□□□ -2.38
CDX4O14627 FGF7P7-201ENST00000514120 227 ntBASIC0.19□□□□□ -2.38
CDX4O14627 MIR4460-201ENST00000577862 86 ntBASIC0.19□□□□□ -2.38
CDX4O14627 MIR5706-201ENST00000579841 80 ntBASIC0.19□□□□□ -2.38
CDX4O14627 RNU6-49P-201ENST00000384256 107 ntBASIC0.18□□□□□ -2.38
CDX4O14627 SNORD90-201ENST00000391145 111 ntBASIC0.18□□□□□ -2.38
CDX4O14627 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.18□□□□□ -2.38
CDX4O14627 HMGN2P22-201ENST00000427588 175 ntBASIC0.18□□□□□ -2.38
CDX4O14627 SNORA18.5-201ENST00000516616 101 ntBASIC0.18□□□□□ -2.38
CDX4O14627 RNU5B-6P-201ENST00000516765 68 ntBASIC0.18□□□□□ -2.38
CDX4O14627 AC069113.3-201ENST00000521019 150 ntBASIC0.18□□□□□ -2.38
CDX4O14627 YWHAEP2-201ENST00000580066 112 ntBASIC0.18□□□□□ -2.38
CDX4O14627 MIR5093-201ENST00000583199 100 ntBASIC0.18□□□□□ -2.38
CDX4O14627 MIR3140-201ENST00000583685 90 ntBASIC0.18□□□□□ -2.38
CDX4O14627 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.18□□□□□ -2.38
CDX4O14627 SNORA9.1-201ENST00000362412 131 ntBASIC0.17□□□□□ -2.38
CDX4O14627 Y_RNA.220-201ENST00000364244 109 ntBASIC0.17□□□□□ -2.38
CDX4O14627 SNORD115-27-201ENST00000364430 82 ntBASIC0.17□□□□□ -2.38
CDX4O14627 MT-TY-201ENST00000387409 66 ntBASIC0.17□□□□□ -2.38
CDX4O14627 MIR501-201ENST00000390204 84 ntBASIC0.17□□□□□ -2.38
CDX4O14627 MIR1265-201ENST00000408444 86 ntBASIC0.17□□□□□ -2.38
CDX4O14627 RNU6-848P-201ENST00000515948 107 ntBASIC0.17□□□□□ -2.38
CDX4O14627 RNU6-617P-201ENST00000516147 107 ntBASIC0.17□□□□□ -2.38
CDX4O14627 RNU6-473P-201ENST00000516164 107 ntBASIC0.17□□□□□ -2.38
CDX4O14627 RNU6-1049P-201ENST00000516414 107 ntBASIC0.17□□□□□ -2.38
CDX4O14627 RNU7-153P-201ENST00000516455 62 ntBASIC0.17□□□□□ -2.38
CDX4O14627 MIR4668-201ENST00000582284 70 ntBASIC0.17□□□□□ -2.38
CDX4O14627 MIR4473-201ENST00000583731 91 ntBASIC0.17□□□□□ -2.38
CDX4O14627 RNU6-1051P-201ENST00000365471 102 ntBASIC0.16□□□□□ -2.38
CDX4O14627 RNU6-402P-201ENST00000410678 103 ntBASIC0.16□□□□□ -2.38
CDX4O14627 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.16□□□□□ -2.38
CDX4O14627 AC069503.3-201ENST00000618674 145 ntBASIC0.16□□□□□ -2.38
CDX4O14627 MIR4315-1-201ENST00000636800 73 ntBASIC0.16□□□□□ -2.38
CDX4O14627 MIR4315-2-201ENST00000640925 73 ntBASIC0.16□□□□□ -2.38
CDX4O14627 Y_RNA.125-201ENST00000363371 111 ntBASIC0.15□□□□□ -2.39
CDX4O14627 RNU6V-201ENST00000384105 107 ntBASIC0.15□□□□□ -2.39
CDX4O14627 SNORD116-22-201ENST00000384430 92 ntBASIC0.15□□□□□ -2.39
CDX4O14627 RNU6-127P-201ENST00000390897 107 ntBASIC0.15□□□□□ -2.39
CDX4O14627 RNU6-267P-201ENST00000516714 103 ntBASIC0.15□□□□□ -2.39
CDX4O14627 RNU6-844P-201ENST00000517175 102 ntBASIC0.15□□□□□ -2.39
CDX4O14627 MIR5589-201ENST00000579442 60 ntBASIC0.15□□□□□ -2.39
CDX4O14627 MIR548O2-201ENST00000616090 70 ntBASIC0.15□□□□□ -2.39
CDX4O14627 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms