Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.75□□□□□ -2.53
DDX39AO00148 MIR577-201ENST00000385196 96 ntBASIC-0.75□□□□□ -2.53
DDX39AO00148 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.75□□□□□ -2.53
DDX39AO00148 RNU6-762P-201ENST00000517107 102 ntBASIC-0.75□□□□□ -2.53
DDX39AO00148 RNA5SP169-201ENST00000517268 117 ntBASIC-0.75□□□□□ -2.53
DDX39AO00148 AC025521.1-201ENST00000621624 286 ntBASIC-0.75□□□□□ -2.53
DDX39AO00148 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.76□□□□□ -2.53
DDX39AO00148 MIR582-201ENST00000365731 98 ntBASIC-0.76□□□□□ -2.53
DDX39AO00148 U3.27-201ENST00000391237 200 ntBASIC-0.76□□□□□ -2.53
DDX39AO00148 snoU13.13-201ENST00000458842 104 ntBASIC-0.76□□□□□ -2.53
DDX39AO00148 SNORD2-201ENST00000459163 69 ntBASIC-0.76□□□□□ -2.53
DDX39AO00148 RNU7-55P-201ENST00000459426 62 ntBASIC-0.76□□□□□ -2.53
DDX39AO00148 MIR4694-201ENST00000578534 80 ntBASIC-0.76□□□□□ -2.53
DDX39AO00148 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.76□□□□□ -2.53
DDX39AO00148 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.76□□□□□ -2.53
DDX39AO00148 SNORD114-14-201ENST00000362723 75 ntBASIC-0.77□□□□□ -2.53
DDX39AO00148 RNU6-426P-201ENST00000516464 97 ntBASIC-0.77□□□□□ -2.53
DDX39AO00148 RNU6-182P-201ENST00000516970 105 ntBASIC-0.77□□□□□ -2.53
DDX39AO00148 MTND5P41-201ENST00000517498 206 ntBASIC-0.77□□□□□ -2.53
DDX39AO00148 MIR4280-201ENST00000582178 76 ntBASIC-0.77□□□□□ -2.53
DDX39AO00148 SNORD114-4-201ENST00000363962 75 ntBASIC-0.78□□□□□ -2.53
DDX39AO00148 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.78□□□□□ -2.53
DDX39AO00148 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.78□□□□□ -2.53
DDX39AO00148 MT-TQ-201ENST00000387372 72 ntBASIC-0.78□□□□□ -2.53
DDX39AO00148 SNORA3B-201ENST00000391305 131 ntBASIC-0.78□□□□□ -2.53
DDX39AO00148 MIR548E-201ENST00000408287 88 ntBASIC-0.78□□□□□ -2.53
DDX39AO00148 RNU6-65P-201ENST00000516332 98 ntBASIC-0.78□□□□□ -2.53
DDX39AO00148 SNORA40.17-201ENST00000517256 115 ntBASIC-0.78□□□□□ -2.53
DDX39AO00148 MIR4536-1-201ENST00000583537 88 ntBASIC-0.78□□□□□ -2.53
DDX39AO00148 RNU6-86P-201ENST00000606534 107 ntBASIC-0.78□□□□□ -2.53
DDX39AO00148 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.78□□□□□ -2.53
DDX39AO00148 RNU6-832P-201ENST00000363319 107 ntBASIC-0.79□□□□□ -2.54
DDX39AO00148 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.79□□□□□ -2.54
DDX39AO00148 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.79□□□□□ -2.54
DDX39AO00148 SNORD50.2-201ENST00000365465 70 ntBASIC-0.79□□□□□ -2.54
DDX39AO00148 MIR204-201ENST00000385200 110 ntBASIC-0.79□□□□□ -2.54
DDX39AO00148 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.79□□□□□ -2.54
DDX39AO00148 SNORD57-201ENST00000448188 72 ntBASIC-0.79□□□□□ -2.54
DDX39AO00148 AL353621.2-201ENST00000605340 133 ntBASIC-0.79□□□□□ -2.54
DDX39AO00148 AL035470.1-201ENST00000622571 220 ntBASIC-0.79□□□□□ -2.54
DDX39AO00148 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.8□□□□□ -2.54
DDX39AO00148 MTND4LP9-201ENST00000427694 174 ntBASIC-0.8□□□□□ -2.54
DDX39AO00148 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.8□□□□□ -2.54
DDX39AO00148 MIR548AX-201ENST00000580117 73 ntBASIC-0.8□□□□□ -2.54
DDX39AO00148 MIR6851-201ENST00000617060 67 ntBASIC-0.8□□□□□ -2.54
DDX39AO00148 RNU6-886P-201ENST00000384319 105 ntBASIC-0.81□□□□□ -2.54
DDX39AO00148 SNORD42B-201ENST00000458893 67 ntBASIC-0.81□□□□□ -2.54
DDX39AO00148 AC097510.1-201ENST00000510945 133 ntBASIC-0.81□□□□□ -2.54
DDX39AO00148 FGF7P7-201ENST00000514120 227 ntBASIC-0.81□□□□□ -2.54
DDX39AO00148 RNU6-772P-201ENST00000516042 105 ntBASIC-0.81□□□□□ -2.54
DDX39AO00148 SNORD38.3-201ENST00000516599 73 ntBASIC-0.81□□□□□ -2.54
DDX39AO00148 MIR4679-2-201ENST00000578358 77 ntBASIC-0.81□□□□□ -2.54
DDX39AO00148 MIR4436A-201ENST00000585278 85 ntBASIC-0.81□□□□□ -2.54
DDX39AO00148 RNY3P2-201ENST00000362918 102 ntBASIC-0.82□□□□□ -2.54
DDX39AO00148 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.82□□□□□ -2.54
DDX39AO00148 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.82□□□□□ -2.54
DDX39AO00148 RNU7-85P-201ENST00000458851 63 ntBASIC-0.82□□□□□ -2.54
DDX39AO00148 AL513043.2-201ENST00000573941 143 ntBASIC-0.82□□□□□ -2.54
DDX39AO00148 RNU6-973P-201ENST00000364690 107 ntBASIC-0.83□□□□□ -2.54
DDX39AO00148 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.83□□□□□ -2.54
DDX39AO00148 AC021146.6-201ENST00000514659 117 ntBASIC-0.83□□□□□ -2.54
DDX39AO00148 RNU6-719P-201ENST00000516671 104 ntBASIC-0.83□□□□□ -2.54
DDX39AO00148 AL157777.2-201ENST00000258070 137 ntBASIC-0.84□□□□□ -2.54
DDX39AO00148 RNU6-476P-201ENST00000384726 107 ntBASIC-0.84□□□□□ -2.54
DDX39AO00148 MIR3613-201ENST00000579844 87 ntBASIC-0.84□□□□□ -2.54
DDX39AO00148 MIR4439-201ENST00000583746 80 ntBASIC-0.84□□□□□ -2.54
DDX39AO00148 RNU6-502P-201ENST00000362419 108 ntBASIC-0.85□□□□□ -2.55
DDX39AO00148 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.85□□□□□ -2.55
DDX39AO00148 SNORA40-201ENST00000388090 126 ntBASIC-0.85□□□□□ -2.55
DDX39AO00148 AC068339.1-201ENST00000526965 141 ntBASIC-0.85□□□□□ -2.55
DDX39AO00148 AL627230.5-201ENST00000619807 58 ntBASIC-0.85□□□□□ -2.55
DDX39AO00148 RNU6-132P-201ENST00000383863 107 ntBASIC-0.86□□□□□ -2.55
DDX39AO00148 SNORA13-201ENST00000458790 133 ntBASIC-0.86□□□□□ -2.55
DDX39AO00148 SNORD45B-201ENST00000364617 72 ntBASIC-0.87□□□□□ -2.55
DDX39AO00148 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.87□□□□□ -2.55
DDX39AO00148 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.87□□□□□ -2.55
DDX39AO00148 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.87□□□□□ -2.55
DDX39AO00148 RNY1P9-201ENST00000532431 109 ntBASIC-0.87□□□□□ -2.55
DDX39AO00148 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.87□□□□□ -2.55
DDX39AO00148 MIR409-201ENST00000362237 79 ntBASIC-0.88□□□□□ -2.55
DDX39AO00148 MIR548U-201ENST00000390728 81 ntBASIC-0.88□□□□□ -2.55
DDX39AO00148 RNU6-257P-201ENST00000410238 98 ntBASIC-0.88□□□□□ -2.55
DDX39AO00148 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.88□□□□□ -2.55
DDX39AO00148 RNU7-200P-201ENST00000516105 62 ntBASIC-0.88□□□□□ -2.55
DDX39AO00148 SNORA63.2-201ENST00000362603 126 ntBASIC-0.89□□□□□ -2.55
DDX39AO00148 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.89□□□□□ -2.55
DDX39AO00148 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.89□□□□□ -2.55
DDX39AO00148 RNU6-644P-201ENST00000391155 98 ntBASIC-0.89□□□□□ -2.55
DDX39AO00148 RNU7-107P-201ENST00000459121 61 ntBASIC-0.89□□□□□ -2.55
DDX39AO00148 MIR5009-201ENST00000578736 100 ntBASIC-0.89□□□□□ -2.55
DDX39AO00148 MIR3064-201ENST00000581130 66 ntBASIC-0.89□□□□□ -2.55
DDX39AO00148 MIR3140-201ENST00000583685 90 ntBASIC-0.89□□□□□ -2.55
DDX39AO00148 MIR5704-201ENST00000584029 77 ntBASIC-0.89□□□□□ -2.55
DDX39AO00148 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.9□□□□□ -2.55
DDX39AO00148 RNU6-813P-201ENST00000384691 107 ntBASIC-0.9□□□□□ -2.55
DDX39AO00148 MIR518B-201ENST00000385127 83 ntBASIC-0.9□□□□□ -2.55
DDX39AO00148 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.9□□□□□ -2.55
DDX39AO00148 AC103810.7-201ENST00000607821 91 ntBASIC-0.9□□□□□ -2.55
DDX39AO00148 RNU6-495P-201ENST00000362995 107 ntBASIC-0.91□□□□□ -2.56
DDX39AO00148 SNORA63.6-201ENST00000364921 119 ntBASIC-0.91□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 207.7 ms