Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RNA5SP257-201ENST00000363023 116 ntBASIC-0.05□□□□□ -2.42
TRIM49D1C9J1S8 SNORD113-1-201ENST00000365321 69 ntBASIC-0.05□□□□□ -2.42
TRIM49D1C9J1S8 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
TRIM49D1C9J1S8 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.05□□□□□ -2.42
TRIM49D1C9J1S8 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.05□□□□□ -2.42
TRIM49D1C9J1S8 SNORD42B-201ENST00000458893 67 ntBASIC-0.05□□□□□ -2.42
TRIM49D1C9J1S8 FGF7P7-201ENST00000514120 227 ntBASIC-0.05□□□□□ -2.42
TRIM49D1C9J1S8 RNU6-848P-201ENST00000515948 107 ntBASIC-0.05□□□□□ -2.42
TRIM49D1C9J1S8 RNU6-617P-201ENST00000516147 107 ntBASIC-0.05□□□□□ -2.42
TRIM49D1C9J1S8 RNU6-473P-201ENST00000516164 107 ntBASIC-0.05□□□□□ -2.42
TRIM49D1C9J1S8 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.05□□□□□ -2.42
TRIM49D1C9J1S8 AC026421.1-201ENST00000519101 163 ntBASIC-0.05□□□□□ -2.42
TRIM49D1C9J1S8 MIR4290-201ENST00000583807 95 ntBASIC-0.05□□□□□ -2.42
TRIM49D1C9J1S8 AC069503.3-201ENST00000618674 145 ntBASIC-0.05□□□□□ -2.42
TRIM49D1C9J1S8 MIR371B-201ENST00000638082 66 ntBASIC-0.05□□□□□ -2.42
TRIM49D1C9J1S8 SNORD114-16-201ENST00000363044 70 ntBASIC-0.06□□□□□ -2.42
TRIM49D1C9J1S8 MIR582-201ENST00000365731 98 ntBASIC-0.06□□□□□ -2.42
TRIM49D1C9J1S8 RNU6-154P-201ENST00000384306 106 ntBASIC-0.06□□□□□ -2.42
TRIM49D1C9J1S8 MIR610-201ENST00000385139 96 ntBASIC-0.06□□□□□ -2.42
TRIM49D1C9J1S8 MIR652-201ENST00000385278 98 ntBASIC-0.06□□□□□ -2.42
TRIM49D1C9J1S8 RNY4P18-201ENST00000391107 89 ntBASIC-0.06□□□□□ -2.42
TRIM49D1C9J1S8 MIR876-201ENST00000401147 81 ntBASIC-0.06□□□□□ -2.42
TRIM49D1C9J1S8 RNU6-935P-201ENST00000410371 100 ntBASIC-0.06□□□□□ -2.42
TRIM49D1C9J1S8 RNU2-51P-201ENST00000410708 197 ntBASIC-0.06□□□□□ -2.42
TRIM49D1C9J1S8 SNORD4B-201ENST00000459083 72 ntBASIC-0.06□□□□□ -2.42
TRIM49D1C9J1S8 SCARNA23-201ENST00000516060 130 ntBASIC-0.06□□□□□ -2.42
TRIM49D1C9J1S8 RNU6-313P-201ENST00000516317 112 ntBASIC-0.06□□□□□ -2.42
TRIM49D1C9J1S8 RNU6-479P-201ENST00000516348 105 ntBASIC-0.06□□□□□ -2.42
TRIM49D1C9J1S8 MIR3064-201ENST00000581130 66 ntBASIC-0.06□□□□□ -2.42
TRIM49D1C9J1S8 AC084368.1-201ENST00000620935 65 ntBASIC-0.06□□□□□ -2.42
TRIM49D1C9J1S8 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.07□□□□□ -2.42
TRIM49D1C9J1S8 RNU4-36P-201ENST00000364294 144 ntBASIC-0.07□□□□□ -2.42
TRIM49D1C9J1S8 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.07□□□□□ -2.42
TRIM49D1C9J1S8 MIR4536-1-201ENST00000583537 88 ntBASIC-0.07□□□□□ -2.42
TRIM49D1C9J1S8 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.07□□□□□ -2.42
TRIM49D1C9J1S8 U2.22-201ENST00000636441 106 ntBASIC-0.07□□□□□ -2.42
TRIM49D1C9J1S8 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.08□□□□□ -2.42
TRIM49D1C9J1S8 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.08□□□□□ -2.42
TRIM49D1C9J1S8 SNORA49-201ENST00000386157 136 ntBASIC-0.08□□□□□ -2.42
TRIM49D1C9J1S8 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.08□□□□□ -2.42
TRIM49D1C9J1S8 RNU6-65P-201ENST00000516332 98 ntBASIC-0.08□□□□□ -2.42
TRIM49D1C9J1S8 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.08□□□□□ -2.42
TRIM49D1C9J1S8 MIR548O2-201ENST00000616090 70 ntBASIC-0.08□□□□□ -2.42
TRIM49D1C9J1S8 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.09□□□□□ -2.42
TRIM49D1C9J1S8 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.09□□□□□ -2.42
TRIM49D1C9J1S8 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
TRIM49D1C9J1S8 RNU4-61P-201ENST00000411243 107 ntBASIC-0.09□□□□□ -2.42
TRIM49D1C9J1S8 RNU7-165P-201ENST00000458864 60 ntBASIC-0.09□□□□□ -2.42
TRIM49D1C9J1S8 RNU6-412P-201ENST00000516434 106 ntBASIC-0.09□□□□□ -2.42
TRIM49D1C9J1S8 RNU6-62P-201ENST00000516526 102 ntBASIC-0.09□□□□□ -2.42
TRIM49D1C9J1S8 RNU6-180P-201ENST00000516697 61 ntBASIC-0.09□□□□□ -2.42
TRIM49D1C9J1S8 U7.3-201ENST00000616123 62 ntBASIC-0.09□□□□□ -2.42
TRIM49D1C9J1S8 RNU4-32P-201ENST00000363404 141 ntBASIC-0.1□□□□□ -2.43
TRIM49D1C9J1S8 SNORD115-27-201ENST00000364430 82 ntBASIC-0.1□□□□□ -2.43
TRIM49D1C9J1S8 SNORD58A-201ENST00000383875 65 ntBASIC-0.1□□□□□ -2.43
TRIM49D1C9J1S8 RNU7-74P-201ENST00000459104 62 ntBASIC-0.1□□□□□ -2.43
TRIM49D1C9J1S8 RNU7-159P-201ENST00000459284 62 ntBASIC-0.1□□□□□ -2.43
TRIM49D1C9J1S8 AC104996.3-201ENST00000590718 94 ntBASIC-0.1□□□□□ -2.43
TRIM49D1C9J1S8 MIR6507-201ENST00000613630 70 ntBASIC-0.1□□□□□ -2.43
TRIM49D1C9J1S8 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.11□□□□□ -2.43
TRIM49D1C9J1S8 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.11□□□□□ -2.43
TRIM49D1C9J1S8 RNU6-652P-201ENST00000365488 107 ntBASIC-0.11□□□□□ -2.43
TRIM49D1C9J1S8 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.11□□□□□ -2.43
TRIM49D1C9J1S8 RNU6-519P-201ENST00000410590 108 ntBASIC-0.11□□□□□ -2.43
TRIM49D1C9J1S8 RNU6-887P-201ENST00000410660 100 ntBASIC-0.11□□□□□ -2.43
TRIM49D1C9J1S8 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.11□□□□□ -2.43
TRIM49D1C9J1S8 AC244250.2-201ENST00000418731 148 ntBASIC-0.11□□□□□ -2.43
TRIM49D1C9J1S8 MIR4439-201ENST00000583746 80 ntBASIC-0.11□□□□□ -2.43
TRIM49D1C9J1S8 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.12□□□□□ -2.43
TRIM49D1C9J1S8 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.12□□□□□ -2.43
TRIM49D1C9J1S8 SNORA24B-201ENST00000384176 131 ntBASIC-0.12□□□□□ -2.43
TRIM49D1C9J1S8 SNORD20-201ENST00000384550 80 ntBASIC-0.12□□□□□ -2.43
TRIM49D1C9J1S8 SNORA75.1-201ENST00000391130 148 ntBASIC-0.12□□□□□ -2.43
TRIM49D1C9J1S8 MIR1302-5-201ENST00000408164 150 ntBASIC-0.12□□□□□ -2.43
TRIM49D1C9J1S8 RNU6-406P-201ENST00000516470 107 ntBASIC-0.12□□□□□ -2.43
TRIM49D1C9J1S8 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.12□□□□□ -2.43
TRIM49D1C9J1S8 AC145423.2-201ENST00000610631 239 ntBASIC-0.12□□□□□ -2.43
TRIM49D1C9J1S8 U7.6-201ENST00000610841 64 ntBASIC-0.12□□□□□ -2.43
TRIM49D1C9J1S8 RNU6-766P-201ENST00000362478 107 ntBASIC-0.13□□□□□ -2.43
TRIM49D1C9J1S8 RNU6-811P-201ENST00000384069 107 ntBASIC-0.13□□□□□ -2.43
TRIM49D1C9J1S8 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.13□□□□□ -2.43
TRIM49D1C9J1S8 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.13□□□□□ -2.43
TRIM49D1C9J1S8 RNU7-153P-201ENST00000516455 62 ntBASIC-0.13□□□□□ -2.43
TRIM49D1C9J1S8 SNORA18.5-201ENST00000516616 101 ntBASIC-0.13□□□□□ -2.43
TRIM49D1C9J1S8 uc_338.10-201ENST00000621872 182 ntBASIC-0.13□□□□□ -2.43
TRIM49D1C9J1S8 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.14□□□□□ -2.43
TRIM49D1C9J1S8 RNU6-990P-201ENST00000364385 104 ntBASIC-0.14□□□□□ -2.43
TRIM49D1C9J1S8 MIR548E-201ENST00000408287 88 ntBASIC-0.14□□□□□ -2.43
TRIM49D1C9J1S8 snoU13.17-201ENST00000458802 104 ntBASIC-0.14□□□□□ -2.43
TRIM49D1C9J1S8 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.14□□□□□ -2.43
TRIM49D1C9J1S8 MIR655-201ENST00000362159 97 ntBASIC-0.15□□□□□ -2.43
TRIM49D1C9J1S8 MIR488-201ENST00000365739 83 ntBASIC-0.15□□□□□ -2.43
TRIM49D1C9J1S8 SNORA40.17-201ENST00000517256 115 ntBASIC-0.15□□□□□ -2.43
TRIM49D1C9J1S8 CR383656.4-201ENST00000546909 122 ntBASIC-0.15□□□□□ -2.43
TRIM49D1C9J1S8 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.16□□□□□ -2.44
TRIM49D1C9J1S8 RNU6-215P-201ENST00000365169 102 ntBASIC-0.16□□□□□ -2.44
TRIM49D1C9J1S8 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.16□□□□□ -2.44
TRIM49D1C9J1S8 RNU6-44P-201ENST00000384045 107 ntBASIC-0.16□□□□□ -2.44
TRIM49D1C9J1S8 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.16□□□□□ -2.44
TRIM49D1C9J1S8 RNU6-640P-201ENST00000363693 105 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms