Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 7SK.11-201ENST00000615477 250 ntBASIC2.56□□□□□ -2
PCDHB13Q9Y5F0 7SK.13-201ENST00000622040 250 ntBASIC2.56□□□□□ -2
PCDHB13Q9Y5F0 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC2.55□□□□□ -2
PCDHB13Q9Y5F0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.54□□□□□ -2
PCDHB13Q9Y5F0 AL137847.3-201ENST00000611521 109 ntBASIC2.54□□□□□ -2
PCDHB13Q9Y5F0 RNA5SP289-201ENST00000362332 137 ntBASIC2.53□□□□□ -2
PCDHB13Q9Y5F0 RNU6-35P-201ENST00000384530 107 ntBASIC2.53□□□□□ -2
PCDHB13Q9Y5F0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
PCDHB13Q9Y5F0 MIR6715A-201ENST00000615929 79 ntBASIC2.52□□□□□ -2.01
PCDHB13Q9Y5F0 MIR6766-201ENST00000622641 72 ntBASIC2.52□□□□□ -2.01
PCDHB13Q9Y5F0 SNORA15B-2-201ENST00000384058 135 ntBASIC2.51□□□□□ -2.01
PCDHB13Q9Y5F0 SNORA15B-1-201ENST00000384334 135 ntBASIC2.51□□□□□ -2.01
PCDHB13Q9Y5F0 MIR4639-201ENST00000584938 69 ntBASIC2.51□□□□□ -2.01
PCDHB13Q9Y5F0 SNORA7.1-201ENST00000363750 139 ntBASIC2.5□□□□□ -2.01
PCDHB13Q9Y5F0 RNU1-141P-201ENST00000364623 158 ntBASIC2.5□□□□□ -2.01
PCDHB13Q9Y5F0 MIR644A-201ENST00000385262 94 ntBASIC2.5□□□□□ -2.01
PCDHB13Q9Y5F0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.5□□□□□ -2.01
PCDHB13Q9Y5F0 AC244669.1-204ENST00000621564 178 ntBASIC2.5□□□□□ -2.01
PCDHB13Q9Y5F0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PCDHB13Q9Y5F0 MIR548L-201ENST00000408303 86 ntBASIC2.49□□□□□ -2.01
PCDHB13Q9Y5F0 RNU4-53P-201ENST00000410828 140 ntBASIC2.49□□□□□ -2.01
PCDHB13Q9Y5F0 RNA5SP402-201ENST00000517148 110 ntBASIC2.49□□□□□ -2.01
PCDHB13Q9Y5F0 MIR3198-2-201ENST00000577868 80 ntBASIC2.49□□□□□ -2.01
PCDHB13Q9Y5F0 MIR6895-201ENST00000613497 78 ntBASIC2.49□□□□□ -2.01
PCDHB13Q9Y5F0 RMST_2.1-201ENST00000617263 136 ntBASIC2.49□□□□□ -2.01
PCDHB13Q9Y5F0 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC2.49□□□□□ -2.01
PCDHB13Q9Y5F0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
PCDHB13Q9Y5F0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PCDHB13Q9Y5F0 SNORD28-201ENST00000384706 75 ntBASIC2.48□□□□□ -2.01
PCDHB13Q9Y5F0 SNORA41B-201ENST00000384785 128 ntBASIC2.48□□□□□ -2.01
PCDHB13Q9Y5F0 MIR144-201ENST00000384886 86 ntBASIC2.48□□□□□ -2.01
PCDHB13Q9Y5F0 RNU1-78P-201ENST00000391248 165 ntBASIC2.48□□□□□ -2.01
PCDHB13Q9Y5F0 RNU6-231P-201ENST00000517122 103 ntBASIC2.48□□□□□ -2.01
PCDHB13Q9Y5F0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.48□□□□□ -2.01
PCDHB13Q9Y5F0 Y_RNA.125-201ENST00000363371 111 ntBASIC2.47□□□□□ -2.01
PCDHB13Q9Y5F0 SNORA33.1-201ENST00000364957 130 ntBASIC2.47□□□□□ -2.01
PCDHB13Q9Y5F0 RNU6-930P-201ENST00000390938 100 ntBASIC2.47□□□□□ -2.01
PCDHB13Q9Y5F0 MIR1827-201ENST00000408549 66 ntBASIC2.47□□□□□ -2.01
PCDHB13Q9Y5F0 Y_RNA.633-201ENST00000459107 95 ntBASIC2.47□□□□□ -2.01
PCDHB13Q9Y5F0 AC002350.1-201ENST00000490759 375 ntBASIC2.47□□□□□ -2.01
PCDHB13Q9Y5F0 RNU5B-6P-201ENST00000516765 68 ntBASIC2.47□□□□□ -2.01
PCDHB13Q9Y5F0 MIR3945-201ENST00000581853 98 ntBASIC2.47□□□□□ -2.01
PCDHB13Q9Y5F0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.01
PCDHB13Q9Y5F0 RNU4-33P-201ENST00000364316 85 ntBASIC2.46□□□□□ -2.02
PCDHB13Q9Y5F0 MIR221-201ENST00000385135 110 ntBASIC2.46□□□□□ -2.02
PCDHB13Q9Y5F0 RNU6-910P-201ENST00000390844 107 ntBASIC2.46□□□□□ -2.02
PCDHB13Q9Y5F0 AC008413.1-201ENST00000511864 177 ntBASIC2.46□□□□□ -2.02
PCDHB13Q9Y5F0 SNORD79.1-201ENST00000516069 84 ntBASIC2.46□□□□□ -2.02
PCDHB13Q9Y5F0 MIRLET7G-201ENST00000362280 84 ntBASIC2.45□□□□□ -2.02
PCDHB13Q9Y5F0 RNU6-726P-201ENST00000364680 107 ntBASIC2.45□□□□□ -2.02
PCDHB13Q9Y5F0 RNA5SP200-201ENST00000516360 103 ntBASIC2.45□□□□□ -2.02
PCDHB13Q9Y5F0 SNORD53-201ENST00000579969 78 ntBASIC2.45□□□□□ -2.02
PCDHB13Q9Y5F0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2.45□□□□□ -2.02
PCDHB13Q9Y5F0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.45□□□□□ -2.02
PCDHB13Q9Y5F0 Y_RNA.246-201ENST00000364495 108 ntBASIC2.44□□□□□ -2.02
PCDHB13Q9Y5F0 MIR5694-201ENST00000581190 76 ntBASIC2.44□□□□□ -2.02
PCDHB13Q9Y5F0 MIR4422-201ENST00000581938 83 ntBASIC2.44□□□□□ -2.02
PCDHB13Q9Y5F0 MIR6132-201ENST00000622083 109 ntBASIC2.44□□□□□ -2.02
PCDHB13Q9Y5F0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PCDHB13Q9Y5F0 MIR17-201ENST00000385012 84 ntBASIC2.43□□□□□ -2.02
PCDHB13Q9Y5F0 SNORA48.3-201ENST00000391081 134 ntBASIC2.43□□□□□ -2.02
PCDHB13Q9Y5F0 RNU6-469P-201ENST00000516253 101 ntBASIC2.43□□□□□ -2.02
PCDHB13Q9Y5F0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.43□□□□□ -2.02
PCDHB13Q9Y5F0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PCDHB13Q9Y5F0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PCDHB13Q9Y5F0 Y_RNA.325-201ENST00000365171 122 ntBASIC2.42□□□□□ -2.02
PCDHB13Q9Y5F0 MIR758-201ENST00000390227 88 ntBASIC2.42□□□□□ -2.02
PCDHB13Q9Y5F0 AL356320.1-201ENST00000429616 163 ntBASIC2.42□□□□□ -2.02
PCDHB13Q9Y5F0 RNU6ATAC29P-201ENST00000408088 125 ntBASIC2.41□□□□□ -2.02
PCDHB13Q9Y5F0 MIR1261-201ENST00000408659 82 ntBASIC2.41□□□□□ -2.02
PCDHB13Q9Y5F0 MIR6840-201ENST00000611937 71 ntBASIC2.41□□□□□ -2.02
PCDHB13Q9Y5F0 SNORA70B-201ENST00000384210 135 ntBASIC2.4□□□□□ -2.03
PCDHB13Q9Y5F0 SNORA3.2-201ENST00000408221 125 ntBASIC2.4□□□□□ -2.03
PCDHB13Q9Y5F0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.4□□□□□ -2.03
PCDHB13Q9Y5F0 AC104435.1-201ENST00000483483 166 ntBASIC2.4□□□□□ -2.03
PCDHB13Q9Y5F0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
PCDHB13Q9Y5F0 SNORA8.2-201ENST00000384372 139 ntBASIC2.39□□□□□ -2.03
PCDHB13Q9Y5F0 RNU1-40P-201ENST00000516816 164 ntBASIC2.39□□□□□ -2.03
PCDHB13Q9Y5F0 RNU1-97P-201ENST00000516872 164 ntBASIC2.39□□□□□ -2.03
PCDHB13Q9Y5F0 MIR4781-201ENST00000585250 76 ntBASIC2.39□□□□□ -2.03
PCDHB13Q9Y5F0 MIR6873-201ENST00000622788 63 ntBASIC2.39□□□□□ -2.03
PCDHB13Q9Y5F0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
PCDHB13Q9Y5F0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
PCDHB13Q9Y5F0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDHB13Q9Y5F0 SNORA63.6-201ENST00000364921 119 ntBASIC2.38□□□□□ -2.03
PCDHB13Q9Y5F0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
PCDHB13Q9Y5F0 RNU6-269P-201ENST00000391077 97 ntBASIC2.38□□□□□ -2.03
PCDHB13Q9Y5F0 MIR548F3-201ENST00000408509 87 ntBASIC2.38□□□□□ -2.03
PCDHB13Q9Y5F0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
PCDHB13Q9Y5F0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.38□□□□□ -2.03
PCDHB13Q9Y5F0 RNU6-716P-201ENST00000365621 103 ntBASIC2.37□□□□□ -2.03
PCDHB13Q9Y5F0 SNORD12-201ENST00000391002 90 ntBASIC2.37□□□□□ -2.03
PCDHB13Q9Y5F0 SNORD116.2-201ENST00000391251 93 ntBASIC2.37□□□□□ -2.03
PCDHB13Q9Y5F0 RNA5SP425-201ENST00000410336 112 ntBASIC2.37□□□□□ -2.03
PCDHB13Q9Y5F0 RNU6-548P-201ENST00000517083 115 ntBASIC2.37□□□□□ -2.03
PCDHB13Q9Y5F0 MIR1273D-201ENST00000577266 86 ntBASIC2.37□□□□□ -2.03
PCDHB13Q9Y5F0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.36□□□□□ -2.03
PCDHB13Q9Y5F0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.36□□□□□ -2.03
PCDHB13Q9Y5F0 SNORA9.1-201ENST00000362412 131 ntBASIC2.36□□□□□ -2.03
PCDHB13Q9Y5F0 RNA5SP484-201ENST00000458857 111 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 248 ms