Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 RNU1-42P-201ENST00000364033 160 ntBASIC1.78□□□□□ -2.12
HCN4Q9Y3Q4 RNU1-119P-201ENST00000391122 165 ntBASIC1.78□□□□□ -2.12
HCN4Q9Y3Q4 AC004223.1-201ENST00000479840 271 ntBASIC1.78□□□□□ -2.12
HCN4Q9Y3Q4 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.78□□□□□ -2.12
HCN4Q9Y3Q4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
HCN4Q9Y3Q4 Y_RNA.12-201ENST00000362393 112 ntBASIC1.77□□□□□ -2.13
HCN4Q9Y3Q4 RNU5F-1-201ENST00000362507 117 ntBASIC1.77□□□□□ -2.13
HCN4Q9Y3Q4 Y_RNA.207-201ENST00000364142 106 ntBASIC1.77□□□□□ -2.13
HCN4Q9Y3Q4 RNU6-411P-201ENST00000384451 107 ntBASIC1.77□□□□□ -2.13
HCN4Q9Y3Q4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.77□□□□□ -2.13
HCN4Q9Y3Q4 HAR1A.1-201ENST00000459583 118 ntBASIC1.77□□□□□ -2.13
HCN4Q9Y3Q4 RNA5SP476-201ENST00000516613 103 ntBASIC1.77□□□□□ -2.13
HCN4Q9Y3Q4 ZNF209P-201ENST00000593450 2304 ntBASIC1.76□□□□□ -2.13
HCN4Q9Y3Q4 MIR520E-201ENST00000384867 87 ntBASIC1.76□□□□□ -2.13
HCN4Q9Y3Q4 MIR100-201ENST00000385259 80 ntBASIC1.76□□□□□ -2.13
HCN4Q9Y3Q4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.76□□□□□ -2.13
HCN4Q9Y3Q4 AL353770.2-201ENST00000620024 78 ntBASIC1.76□□□□□ -2.13
HCN4Q9Y3Q4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
HCN4Q9Y3Q4 RNU6-788P-201ENST00000390967 104 ntBASIC1.75□□□□□ -2.13
HCN4Q9Y3Q4 SNORA67.6-201ENST00000391093 99 ntBASIC1.75□□□□□ -2.13
HCN4Q9Y3Q4 MIR1827-201ENST00000408549 66 ntBASIC1.75□□□□□ -2.13
HCN4Q9Y3Q4 RNU6-935P-201ENST00000410371 100 ntBASIC1.75□□□□□ -2.13
HCN4Q9Y3Q4 MIR96-201ENST00000362288 78 ntBASIC1.74□□□□□ -2.13
HCN4Q9Y3Q4 MIR216A-201ENST00000385063 110 ntBASIC1.74□□□□□ -2.13
HCN4Q9Y3Q4 uc_338.16-201ENST00000621804 95 ntBASIC1.74□□□□□ -2.13
HCN4Q9Y3Q4 RNA5SP457-201ENST00000363657 124 ntBASIC1.73□□□□□ -2.13
HCN4Q9Y3Q4 Y_RNA.174-201ENST00000363781 105 ntBASIC1.73□□□□□ -2.13
HCN4Q9Y3Q4 MIR4484-201ENST00000582855 83 ntBASIC1.73□□□□□ -2.13
HCN4Q9Y3Q4 MIR3140-201ENST00000583685 90 ntBASIC1.73□□□□□ -2.13
HCN4Q9Y3Q4 SNORA16.1-201ENST00000364597 132 ntBASIC1.72□□□□□ -2.13
HCN4Q9Y3Q4 RNU1-93P-201ENST00000364704 169 ntBASIC1.72□□□□□ -2.13
HCN4Q9Y3Q4 SNORD115-44-201ENST00000365391 82 ntBASIC1.72□□□□□ -2.13
HCN4Q9Y3Q4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.72□□□□□ -2.13
HCN4Q9Y3Q4 MIR548J-201ENST00000408833 112 ntBASIC1.72□□□□□ -2.13
HCN4Q9Y3Q4 Y_RNA.606-201ENST00000410579 103 ntBASIC1.72□□□□□ -2.13
HCN4Q9Y3Q4 AC002429.1-201ENST00000437672 148 ntBASIC1.72□□□□□ -2.13
HCN4Q9Y3Q4 AC067940.1-201ENST00000458411 300 ntBASIC1.72□□□□□ -2.13
HCN4Q9Y3Q4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.72□□□□□ -2.13
HCN4Q9Y3Q4 RNU6-340P-201ENST00000364005 107 ntBASIC1.71□□□□□ -2.14
HCN4Q9Y3Q4 MIR520F-201ENST00000384824 87 ntBASIC1.71□□□□□ -2.14
HCN4Q9Y3Q4 U3.27-201ENST00000391237 200 ntBASIC1.71□□□□□ -2.14
HCN4Q9Y3Q4 RNU2-59P-201ENST00000410482 191 ntBASIC1.71□□□□□ -2.14
HCN4Q9Y3Q4 AL354695.1-201ENST00000427935 228 ntBASIC1.71□□□□□ -2.14
HCN4Q9Y3Q4 AC114801.3-201ENST00000510231 177 ntBASIC1.71□□□□□ -2.14
HCN4Q9Y3Q4 AC097510.1-201ENST00000510945 133 ntBASIC1.71□□□□□ -2.14
HCN4Q9Y3Q4 RNU6-70P-201ENST00000516438 60 ntBASIC1.71□□□□□ -2.14
HCN4Q9Y3Q4 SNORA24B-201ENST00000384176 131 ntBASIC1.7□□□□□ -2.14
HCN4Q9Y3Q4 RNU6-287P-201ENST00000516230 98 ntBASIC1.7□□□□□ -2.14
HCN4Q9Y3Q4 SNORA31.14-201ENST00000516728 116 ntBASIC1.7□□□□□ -2.14
HCN4Q9Y3Q4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HCN4Q9Y3Q4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HCN4Q9Y3Q4 RNU6-681P-201ENST00000364012 104 ntBASIC1.69□□□□□ -2.14
HCN4Q9Y3Q4 RNU6-687P-201ENST00000516443 89 ntBASIC1.69□□□□□ -2.14
HCN4Q9Y3Q4 RNU6-1015P-201ENST00000517121 99 ntBASIC1.69□□□□□ -2.14
HCN4Q9Y3Q4 MIR4419B-201ENST00000577260 68 ntBASIC1.69□□□□□ -2.14
HCN4Q9Y3Q4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HCN4Q9Y3Q4 Y_RNA.32-201ENST00000362589 110 ntBASIC1.68□□□□□ -2.14
HCN4Q9Y3Q4 RNA5SP403-201ENST00000363598 108 ntBASIC1.68□□□□□ -2.14
HCN4Q9Y3Q4 MIR451A-201ENST00000385059 72 ntBASIC1.68□□□□□ -2.14
HCN4Q9Y3Q4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
HCN4Q9Y3Q4 MIR942-201ENST00000401111 86 ntBASIC1.68□□□□□ -2.14
HCN4Q9Y3Q4 RNU6-871P-201ENST00000516122 100 ntBASIC1.68□□□□□ -2.14
HCN4Q9Y3Q4 Y_RNA.371-201ENST00000365591 113 ntBASIC1.67□□□□□ -2.14
HCN4Q9Y3Q4 RNU6-1057P-201ENST00000517162 102 ntBASIC1.67□□□□□ -2.14
HCN4Q9Y3Q4 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.67□□□□□ -2.14
HCN4Q9Y3Q4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.66□□□□□ -2.14
HCN4Q9Y3Q4 SNORD48-201ENST00000364953 64 ntBASIC1.66□□□□□ -2.14
HCN4Q9Y3Q4 SNORA25-201ENST00000384384 134 ntBASIC1.66□□□□□ -2.14
HCN4Q9Y3Q4 SNORA31.24-201ENST00000517232 57 ntBASIC1.66□□□□□ -2.14
HCN4Q9Y3Q4 RNA5SP62-201ENST00000363457 110 ntBASIC1.65□□□□□ -2.15
HCN4Q9Y3Q4 RNA5SP363-201ENST00000365072 115 ntBASIC1.65□□□□□ -2.15
HCN4Q9Y3Q4 MIR193B-201ENST00000384907 83 ntBASIC1.65□□□□□ -2.15
HCN4Q9Y3Q4 RNU6-1052P-201ENST00000411398 104 ntBASIC1.65□□□□□ -2.15
HCN4Q9Y3Q4 RNU7-13P-201ENST00000516413 62 ntBASIC1.65□□□□□ -2.15
HCN4Q9Y3Q4 RNU6-1110P-201ENST00000516462 101 ntBASIC1.65□□□□□ -2.15
HCN4Q9Y3Q4 RNU6-719P-201ENST00000516671 104 ntBASIC1.65□□□□□ -2.15
HCN4Q9Y3Q4 AL136317.1-201ENST00000612653 226 ntBASIC1.65□□□□□ -2.15
HCN4Q9Y3Q4 SNORD115-24-201ENST00000363528 82 ntBASIC1.64□□□□□ -2.15
HCN4Q9Y3Q4 RNU6-154P-201ENST00000384306 106 ntBASIC1.64□□□□□ -2.15
HCN4Q9Y3Q4 MIR222-201ENST00000384992 110 ntBASIC1.64□□□□□ -2.15
HCN4Q9Y3Q4 MIR517C-201ENST00000385103 95 ntBASIC1.64□□□□□ -2.15
HCN4Q9Y3Q4 RNU6-634P-201ENST00000459134 106 ntBASIC1.64□□□□□ -2.15
HCN4Q9Y3Q4 U6.81-201ENST00000612550 106 ntBASIC1.64□□□□□ -2.15
HCN4Q9Y3Q4 RNA5SP327-201ENST00000362494 101 ntBASIC1.63□□□□□ -2.15
HCN4Q9Y3Q4 RNU6-590P-201ENST00000365039 107 ntBASIC1.63□□□□□ -2.15
HCN4Q9Y3Q4 SNORA8.1-201ENST00000384250 140 ntBASIC1.63□□□□□ -2.15
HCN4Q9Y3Q4 RNU6-997P-201ENST00000384725 107 ntBASIC1.63□□□□□ -2.15
HCN4Q9Y3Q4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
HCN4Q9Y3Q4 RNU6-587P-201ENST00000391282 106 ntBASIC1.63□□□□□ -2.15
HCN4Q9Y3Q4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.63□□□□□ -2.15
HCN4Q9Y3Q4 AC002350.1-201ENST00000490759 375 ntBASIC1.63□□□□□ -2.15
HCN4Q9Y3Q4 RNA5SP436-201ENST00000516020 115 ntBASIC1.63□□□□□ -2.15
HCN4Q9Y3Q4 RNU7-161P-201ENST00000517289 62 ntBASIC1.63□□□□□ -2.15
HCN4Q9Y3Q4 Y_RNA.115-201ENST00000363272 98 ntBASIC1.62□□□□□ -2.15
HCN4Q9Y3Q4 SNORD114-27-201ENST00000363766 70 ntBASIC1.62□□□□□ -2.15
HCN4Q9Y3Q4 RNU6-539P-201ENST00000516665 103 ntBASIC1.62□□□□□ -2.15
HCN4Q9Y3Q4 MIR1273G-201ENST00000577677 100 ntBASIC1.62□□□□□ -2.15
HCN4Q9Y3Q4 MIR3920-201ENST00000581751 86 ntBASIC1.62□□□□□ -2.15
HCN4Q9Y3Q4 MIR664A-201ENST00000626086 82 ntBASIC1.62□□□□□ -2.15
HCN4Q9Y3Q4 RNU6-330P-201ENST00000363015 107 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 277.9 ms