Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.33□□□□□ -2.46
FOXA2Q9Y261 AC244250.2-201ENST00000418731 148 ntBASIC-0.33□□□□□ -2.46
FOXA2Q9Y261 RNU7-200P-201ENST00000516105 62 ntBASIC-0.33□□□□□ -2.46
FOXA2Q9Y261 AC096720.1-201ENST00000604441 183 ntBASIC-0.33□□□□□ -2.46
FOXA2Q9Y261 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.34□□□□□ -2.46
FOXA2Q9Y261 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.34□□□□□ -2.46
FOXA2Q9Y261 SNORD101-201ENST00000384027 73 ntBASIC-0.34□□□□□ -2.46
FOXA2Q9Y261 RNU6-480P-201ENST00000384332 107 ntBASIC-0.34□□□□□ -2.46
FOXA2Q9Y261 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.34□□□□□ -2.46
FOXA2Q9Y261 SNORA40-201ENST00000388090 126 ntBASIC-0.34□□□□□ -2.46
FOXA2Q9Y261 RNU6-175P-201ENST00000516896 107 ntBASIC-0.34□□□□□ -2.46
FOXA2Q9Y261 AC007012.1-201ENST00000567192 175 ntBASIC-0.34□□□□□ -2.46
FOXA2Q9Y261 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.34□□□□□ -2.46
FOXA2Q9Y261 RNU6-664P-201ENST00000362381 107 ntBASIC-0.35□□□□□ -2.47
FOXA2Q9Y261 RNA5SP98-201ENST00000363158 137 ntBASIC-0.35□□□□□ -2.47
FOXA2Q9Y261 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.35□□□□□ -2.47
FOXA2Q9Y261 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.35□□□□□ -2.47
FOXA2Q9Y261 RNU6-811P-201ENST00000384069 107 ntBASIC-0.35□□□□□ -2.47
FOXA2Q9Y261 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.35□□□□□ -2.47
FOXA2Q9Y261 snoU13.11-201ENST00000459219 104 ntBASIC-0.35□□□□□ -2.47
FOXA2Q9Y261 SNORD126-201ENST00000459475 77 ntBASIC-0.35□□□□□ -2.47
FOXA2Q9Y261 RNU6-772P-201ENST00000516042 105 ntBASIC-0.35□□□□□ -2.47
FOXA2Q9Y261 RNA5SP285-201ENST00000516619 119 ntBASIC-0.35□□□□□ -2.47
FOXA2Q9Y261 MIR4696-201ENST00000581431 70 ntBASIC-0.35□□□□□ -2.47
FOXA2Q9Y261 MIR4436A-201ENST00000585278 85 ntBASIC-0.35□□□□□ -2.47
FOXA2Q9Y261 AL157777.2-201ENST00000258070 137 ntBASIC-0.36□□□□□ -2.47
FOXA2Q9Y261 SNORD114-31-201ENST00000363219 75 ntBASIC-0.36□□□□□ -2.47
FOXA2Q9Y261 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.36□□□□□ -2.47
FOXA2Q9Y261 RNA5SP205-201ENST00000364653 136 ntBASIC-0.36□□□□□ -2.47
FOXA2Q9Y261 MIR539-201ENST00000365690 78 ntBASIC-0.36□□□□□ -2.47
FOXA2Q9Y261 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.36□□□□□ -2.47
FOXA2Q9Y261 MIR577-201ENST00000385196 96 ntBASIC-0.36□□□□□ -2.47
FOXA2Q9Y261 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.36□□□□□ -2.47
FOXA2Q9Y261 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.36□□□□□ -2.47
FOXA2Q9Y261 MIR4263-201ENST00000584745 83 ntBASIC-0.36□□□□□ -2.47
FOXA2Q9Y261 AC090425.1-201ENST00000610007 140 ntBASIC-0.36□□□□□ -2.47
FOXA2Q9Y261 AL590491.3-201ENST00000610731 82 ntBASIC-0.36□□□□□ -2.47
FOXA2Q9Y261 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.37□□□□□ -2.47
FOXA2Q9Y261 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.37□□□□□ -2.47
FOXA2Q9Y261 MIR216B-201ENST00000390186 82 ntBASIC-0.37□□□□□ -2.47
FOXA2Q9Y261 RNU6-257P-201ENST00000410238 98 ntBASIC-0.37□□□□□ -2.47
FOXA2Q9Y261 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.37□□□□□ -2.47
FOXA2Q9Y261 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.37□□□□□ -2.47
FOXA2Q9Y261 IGLVI-20-201ENST00000519296 130 ntBASIC-0.37□□□□□ -2.47
FOXA2Q9Y261 MIR4679-2-201ENST00000578358 77 ntBASIC-0.37□□□□□ -2.47
FOXA2Q9Y261 MIR4694-201ENST00000578534 80 ntBASIC-0.37□□□□□ -2.47
FOXA2Q9Y261 MIR548AZ-201ENST00000616567 95 ntBASIC-0.37□□□□□ -2.47
FOXA2Q9Y261 MIR20A-201ENST00000362279 71 ntBASIC-0.38□□□□□ -2.47
FOXA2Q9Y261 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.38□□□□□ -2.47
FOXA2Q9Y261 SNORD14C-201ENST00000365382 88 ntBASIC-0.38□□□□□ -2.47
FOXA2Q9Y261 RPS29P8-201ENST00000445109 171 ntBASIC-0.38□□□□□ -2.47
FOXA2Q9Y261 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.38□□□□□ -2.47
FOXA2Q9Y261 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.39□□□□□ -2.47
FOXA2Q9Y261 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.39□□□□□ -2.47
FOXA2Q9Y261 MIR652-201ENST00000385278 98 ntBASIC-0.39□□□□□ -2.47
FOXA2Q9Y261 SNORD75.1-201ENST00000408373 60 ntBASIC-0.39□□□□□ -2.47
FOXA2Q9Y261 RNU6-935P-201ENST00000410371 100 ntBASIC-0.39□□□□□ -2.47
FOXA2Q9Y261 RNU6-284P-201ENST00000411105 106 ntBASIC-0.39□□□□□ -2.47
FOXA2Q9Y261 RNU6-346P-201ENST00000516288 111 ntBASIC-0.39□□□□□ -2.47
FOXA2Q9Y261 RNU6-794P-201ENST00000517261 64 ntBASIC-0.39□□□□□ -2.47
FOXA2Q9Y261 RNU6-86P-201ENST00000606534 107 ntBASIC-0.39□□□□□ -2.47
FOXA2Q9Y261 MIR548O2-201ENST00000616090 70 ntBASIC-0.39□□□□□ -2.47
FOXA2Q9Y261 AL035470.1-201ENST00000622571 220 ntBASIC-0.39□□□□□ -2.47
FOXA2Q9Y261 AL391099.1-201ENST00000624635 187 ntBASIC-0.39□□□□□ -2.47
FOXA2Q9Y261 MIR4788-201ENST00000639104 80 ntBASIC-0.39□□□□□ -2.47
FOXA2Q9Y261 RNY3P2-201ENST00000362918 102 ntBASIC-0.4□□□□□ -2.47
FOXA2Q9Y261 RNU6-832P-201ENST00000363319 107 ntBASIC-0.4□□□□□ -2.47
FOXA2Q9Y261 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.4□□□□□ -2.47
FOXA2Q9Y261 SNORA32.3-201ENST00000384772 121 ntBASIC-0.4□□□□□ -2.47
FOXA2Q9Y261 AC244090.1-201ENST00000441884 93 ntBASIC-0.4□□□□□ -2.47
FOXA2Q9Y261 RNU6-255P-201ENST00000516957 105 ntBASIC-0.4□□□□□ -2.47
FOXA2Q9Y261 RNA5SP169-201ENST00000517268 117 ntBASIC-0.4□□□□□ -2.47
FOXA2Q9Y261 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.4□□□□□ -2.47
FOXA2Q9Y261 AC025521.1-201ENST00000621624 286 ntBASIC-0.4□□□□□ -2.47
FOXA2Q9Y261 uc_338.36-201ENST00000622331 158 ntBASIC-0.4□□□□□ -2.47
FOXA2Q9Y261 MIR6759-201ENST00000638110 65 ntBASIC-0.4□□□□□ -2.47
FOXA2Q9Y261 RNY1P5-201ENST00000383890 115 ntBASIC-0.41□□□□□ -2.48
FOXA2Q9Y261 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.41□□□□□ -2.48
FOXA2Q9Y261 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.41□□□□□ -2.48
FOXA2Q9Y261 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.41□□□□□ -2.48
FOXA2Q9Y261 RNU7-107P-201ENST00000459121 61 ntBASIC-0.41□□□□□ -2.48
FOXA2Q9Y261 RNU6-75P-201ENST00000515944 104 ntBASIC-0.41□□□□□ -2.48
FOXA2Q9Y261 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.41□□□□□ -2.48
FOXA2Q9Y261 AC068339.1-201ENST00000526965 141 ntBASIC-0.41□□□□□ -2.48
FOXA2Q9Y261 MIR4432-201ENST00000581823 84 ntBASIC-0.41□□□□□ -2.48
FOXA2Q9Y261 MIR4645-201ENST00000583158 77 ntBASIC-0.41□□□□□ -2.48
FOXA2Q9Y261 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.41□□□□□ -2.48
FOXA2Q9Y261 SNORD114-28-201ENST00000363610 72 ntBASIC-0.42□□□□□ -2.48
FOXA2Q9Y261 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.42□□□□□ -2.48
FOXA2Q9Y261 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.42□□□□□ -2.48
FOXA2Q9Y261 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.42□□□□□ -2.48
FOXA2Q9Y261 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.42□□□□□ -2.48
FOXA2Q9Y261 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.42□□□□□ -2.48
FOXA2Q9Y261 AC114755.3-201ENST00000481111 251 ntBASIC-0.42□□□□□ -2.48
FOXA2Q9Y261 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.42□□□□□ -2.48
FOXA2Q9Y261 RNU6-971P-201ENST00000516920 106 ntBASIC-0.42□□□□□ -2.48
FOXA2Q9Y261 SNORD50.2-201ENST00000365465 70 ntBASIC-0.43□□□□□ -2.48
FOXA2Q9Y261 RNU6-455P-201ENST00000384681 107 ntBASIC-0.43□□□□□ -2.48
FOXA2Q9Y261 MIR451A-201ENST00000385059 72 ntBASIC-0.43□□□□□ -2.48
FOXA2Q9Y261 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms