Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 SNORD101-201ENST00000384027 73 ntBASIC-0.47□□□□□ -2.48
CCL28Q9NRJ3 MIR1912-201ENST00000410389 80 ntBASIC-0.47□□□□□ -2.48
CCL28Q9NRJ3 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.47□□□□□ -2.48
CCL28Q9NRJ3 MTND5P18-201ENST00000445624 1801 ntBASIC-0.48□□□□□ -2.49
CCL28Q9NRJ3 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.48□□□□□ -2.49
CCL28Q9NRJ3 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.48□□□□□ -2.49
CCL28Q9NRJ3 RNU6-886P-201ENST00000384319 105 ntBASIC-0.48□□□□□ -2.49
CCL28Q9NRJ3 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.48□□□□□ -2.49
CCL28Q9NRJ3 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.48□□□□□ -2.49
CCL28Q9NRJ3 MTND5P41-201ENST00000517498 206 ntBASIC-0.48□□□□□ -2.49
CCL28Q9NRJ3 MIR20A-201ENST00000362279 71 ntBASIC-0.49□□□□□ -2.49
CCL28Q9NRJ3 RNU6-664P-201ENST00000362381 107 ntBASIC-0.49□□□□□ -2.49
CCL28Q9NRJ3 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.49□□□□□ -2.49
CCL28Q9NRJ3 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.49□□□□□ -2.49
CCL28Q9NRJ3 RNU6-480P-201ENST00000384332 107 ntBASIC-0.49□□□□□ -2.49
CCL28Q9NRJ3 RNU6-426P-201ENST00000516464 97 ntBASIC-0.49□□□□□ -2.49
CCL28Q9NRJ3 AC096720.1-201ENST00000604441 183 ntBASIC-0.49□□□□□ -2.49
CCL28Q9NRJ3 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.5□□□□□ -2.49
CCL28Q9NRJ3 RNU6-935P-201ENST00000410371 100 ntBASIC-0.5□□□□□ -2.49
CCL28Q9NRJ3 snoU13.11-201ENST00000459219 104 ntBASIC-0.5□□□□□ -2.49
CCL28Q9NRJ3 SNORD126-201ENST00000459475 77 ntBASIC-0.5□□□□□ -2.49
CCL28Q9NRJ3 RNA5SP272-201ENST00000516095 111 ntBASIC-0.5□□□□□ -2.49
CCL28Q9NRJ3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.5□□□□□ -2.49
CCL28Q9NRJ3 MIR4696-201ENST00000581431 70 ntBASIC-0.5□□□□□ -2.49
CCL28Q9NRJ3 AL590491.3-201ENST00000610731 82 ntBASIC-0.5□□□□□ -2.49
CCL28Q9NRJ3 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.51□□□□□ -2.49
CCL28Q9NRJ3 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.51□□□□□ -2.49
CCL28Q9NRJ3 AC244090.1-201ENST00000441884 93 ntBASIC-0.51□□□□□ -2.49
CCL28Q9NRJ3 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.51□□□□□ -2.49
CCL28Q9NRJ3 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.51□□□□□ -2.49
CCL28Q9NRJ3 MIR548O2-201ENST00000616090 70 ntBASIC-0.51□□□□□ -2.49
CCL28Q9NRJ3 RNU6-455P-201ENST00000384681 107 ntBASIC-0.52□□□□□ -2.49
CCL28Q9NRJ3 MIR196A2-201ENST00000385189 110 ntBASIC-0.52□□□□□ -2.49
CCL28Q9NRJ3 MIR652-201ENST00000385278 98 ntBASIC-0.52□□□□□ -2.49
CCL28Q9NRJ3 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.52□□□□□ -2.49
CCL28Q9NRJ3 MIR4802-201ENST00000581881 80 ntBASIC-0.52□□□□□ -2.49
CCL28Q9NRJ3 AP001180.6-201ENST00000584918 159 ntBASIC-0.52□□□□□ -2.49
CCL28Q9NRJ3 MIR8064-201ENST00000612863 90 ntBASIC-0.52□□□□□ -2.49
CCL28Q9NRJ3 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.53□□□□□ -2.49
CCL28Q9NRJ3 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.53□□□□□ -2.49
CCL28Q9NRJ3 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.53□□□□□ -2.49
CCL28Q9NRJ3 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.53□□□□□ -2.49
CCL28Q9NRJ3 MTND4LP9-201ENST00000427694 174 ntBASIC-0.53□□□□□ -2.49
CCL28Q9NRJ3 RNU6-772P-201ENST00000516042 105 ntBASIC-0.53□□□□□ -2.49
CCL28Q9NRJ3 MIR4694-201ENST00000578534 80 ntBASIC-0.53□□□□□ -2.49
CCL28Q9NRJ3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.53□□□□□ -2.49
CCL28Q9NRJ3 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.54□□□□□ -2.5
CCL28Q9NRJ3 MIR577-201ENST00000385196 96 ntBASIC-0.54□□□□□ -2.5
CCL28Q9NRJ3 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.55□□□□□ -2.5
CCL28Q9NRJ3 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.55□□□□□ -2.5
CCL28Q9NRJ3 SNORD114-11-201ENST00000363738 75 ntBASIC-0.55□□□□□ -2.5
CCL28Q9NRJ3 SNORA40-201ENST00000388090 126 ntBASIC-0.55□□□□□ -2.5
CCL28Q9NRJ3 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
CCL28Q9NRJ3 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.55□□□□□ -2.5
CCL28Q9NRJ3 RNA5SP66-201ENST00000517178 101 ntBASIC-0.55□□□□□ -2.5
CCL28Q9NRJ3 MIR4679-2-201ENST00000578358 77 ntBASIC-0.55□□□□□ -2.5
CCL28Q9NRJ3 MIR548AZ-201ENST00000616567 95 ntBASIC-0.55□□□□□ -2.5
CCL28Q9NRJ3 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.56□□□□□ -2.5
CCL28Q9NRJ3 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.56□□□□□ -2.5
CCL28Q9NRJ3 MIR9-2-201ENST00000384838 87 ntBASIC-0.56□□□□□ -2.5
CCL28Q9NRJ3 MIR451A-201ENST00000385059 72 ntBASIC-0.56□□□□□ -2.5
CCL28Q9NRJ3 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.56□□□□□ -2.5
CCL28Q9NRJ3 RNU6-75P-201ENST00000515944 104 ntBASIC-0.56□□□□□ -2.5
CCL28Q9NRJ3 RNU7-200P-201ENST00000516105 62 ntBASIC-0.56□□□□□ -2.5
CCL28Q9NRJ3 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.56□□□□□ -2.5
CCL28Q9NRJ3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.56□□□□□ -2.5
CCL28Q9NRJ3 AL035470.1-201ENST00000622571 220 ntBASIC-0.56□□□□□ -2.5
CCL28Q9NRJ3 AL157777.2-201ENST00000258070 137 ntBASIC-0.57□□□□□ -2.5
CCL28Q9NRJ3 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.57□□□□□ -2.5
CCL28Q9NRJ3 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.57□□□□□ -2.5
CCL28Q9NRJ3 SNORA32.3-201ENST00000384772 121 ntBASIC-0.57□□□□□ -2.5
CCL28Q9NRJ3 RNU6-284P-201ENST00000411105 106 ntBASIC-0.57□□□□□ -2.5
CCL28Q9NRJ3 AP000676.1-201ENST00000533307 52 ntBASIC-0.57□□□□□ -2.5
CCL28Q9NRJ3 MIR5589-201ENST00000579442 60 ntBASIC-0.57□□□□□ -2.5
CCL28Q9NRJ3 AC025521.1-201ENST00000621624 286 ntBASIC-0.57□□□□□ -2.5
CCL28Q9NRJ3 uc_338.36-201ENST00000622331 158 ntBASIC-0.57□□□□□ -2.5
CCL28Q9NRJ3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.58□□□□□ -2.5
CCL28Q9NRJ3 MIR101-1-201ENST00000362265 75 ntBASIC-0.58□□□□□ -2.5
CCL28Q9NRJ3 RNY3P2-201ENST00000362918 102 ntBASIC-0.58□□□□□ -2.5
CCL28Q9NRJ3 RNU6-832P-201ENST00000363319 107 ntBASIC-0.58□□□□□ -2.5
CCL28Q9NRJ3 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.58□□□□□ -2.5
CCL28Q9NRJ3 U3.27-201ENST00000391237 200 ntBASIC-0.58□□□□□ -2.5
CCL28Q9NRJ3 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.58□□□□□ -2.5
CCL28Q9NRJ3 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.58□□□□□ -2.5
CCL28Q9NRJ3 RNU6-65P-201ENST00000516332 98 ntBASIC-0.58□□□□□ -2.5
CCL28Q9NRJ3 MIR4432-201ENST00000581823 84 ntBASIC-0.58□□□□□ -2.5
CCL28Q9NRJ3 MIR4493-201ENST00000584016 73 ntBASIC-0.58□□□□□ -2.5
CCL28Q9NRJ3 RNU6-54P-201ENST00000365563 107 ntBASIC-0.59□□□□□ -2.5
CCL28Q9NRJ3 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.59□□□□□ -2.5
CCL28Q9NRJ3 RNU6-900P-201ENST00000384498 102 ntBASIC-0.59□□□□□ -2.5
CCL28Q9NRJ3 snosnR66.1-201ENST00000391095 99 ntBASIC-0.59□□□□□ -2.5
CCL28Q9NRJ3 RNU6-257P-201ENST00000410238 98 ntBASIC-0.59□□□□□ -2.5
CCL28Q9NRJ3 SNORD2-201ENST00000459163 69 ntBASIC-0.59□□□□□ -2.5
CCL28Q9NRJ3 SNORD115-25-201ENST00000362619 82 ntBASIC-0.6□□□□□ -2.51
CCL28Q9NRJ3 SNORD50.2-201ENST00000365465 70 ntBASIC-0.6□□□□□ -2.51
CCL28Q9NRJ3 SNORA49-201ENST00000386157 136 ntBASIC-0.6□□□□□ -2.51
CCL28Q9NRJ3 AC114755.3-201ENST00000481111 251 ntBASIC-0.6□□□□□ -2.51
CCL28Q9NRJ3 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.6□□□□□ -2.51
CCL28Q9NRJ3 MIR4439-201ENST00000583746 80 ntBASIC-0.6□□□□□ -2.51
CCL28Q9NRJ3 RNU6-86P-201ENST00000606534 107 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 182.6 ms