Protein–RNA interactions for Protein: Q9NP99

TREM1, Triggering receptor expressed on myeloid cells 1, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1Q9NP99 SNORD38.2-201ENST00000384470 69 ntBASIC-1.91□□□□□ -2.72
TREM1Q9NP99 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.91□□□□□ -2.72
TREM1Q9NP99 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.91□□□□□ -2.72
TREM1Q9NP99 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.91□□□□□ -2.72
TREM1Q9NP99 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.91□□□□□ -2.72
TREM1Q9NP99 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.91□□□□□ -2.72
TREM1Q9NP99 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.91□□□□□ -2.72
TREM1Q9NP99 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.92□□□□□ -2.72
TREM1Q9NP99 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.92□□□□□ -2.72
TREM1Q9NP99 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.92□□□□□ -2.72
TREM1Q9NP99 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.92□□□□□ -2.72
TREM1Q9NP99 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.92□□□□□ -2.72
TREM1Q9NP99 U3.27-201ENST00000391237 200 ntBASIC-1.92□□□□□ -2.72
TREM1Q9NP99 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.92□□□□□ -2.72
TREM1Q9NP99 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.92□□□□□ -2.72
TREM1Q9NP99 RNU6-719P-201ENST00000516671 104 ntBASIC-1.92□□□□□ -2.72
TREM1Q9NP99 AL627230.5-201ENST00000619807 58 ntBASIC-1.92□□□□□ -2.72
TREM1Q9NP99 AL365265.1-201ENST00000621045 234 ntBASIC-1.92□□□□□ -2.72
TREM1Q9NP99 Y_RNA.70-201ENST00000362886 110 ntBASIC-1.93□□□□□ -2.72
TREM1Q9NP99 RNU6-770P-201ENST00000363929 105 ntBASIC-1.93□□□□□ -2.72
TREM1Q9NP99 MIR507-201ENST00000385234 94 ntBASIC-1.93□□□□□ -2.72
TREM1Q9NP99 RNU6-823P-201ENST00000391042 103 ntBASIC-1.93□□□□□ -2.72
TREM1Q9NP99 MIR4744-201ENST00000581563 82 ntBASIC-1.93□□□□□ -2.72
TREM1Q9NP99 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.94□□□□□ -2.72
TREM1Q9NP99 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.94□□□□□ -2.72
TREM1Q9NP99 RNU6-400P-201ENST00000391173 106 ntBASIC-1.94□□□□□ -2.72
TREM1Q9NP99 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.94□□□□□ -2.72
TREM1Q9NP99 AC113618.1-201ENST00000416747 285 ntBASIC-1.94□□□□□ -2.72
TREM1Q9NP99 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.95□□□□□ -2.72
TREM1Q9NP99 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.95□□□□□ -2.72
TREM1Q9NP99 RNU6-119P-201ENST00000364882 107 ntBASIC-1.95□□□□□ -2.72
TREM1Q9NP99 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.95□□□□□ -2.72
TREM1Q9NP99 RNU6-168P-201ENST00000516189 101 ntBASIC-1.95□□□□□ -2.72
TREM1Q9NP99 RNU6-118P-201ENST00000516552 102 ntBASIC-1.95□□□□□ -2.72
TREM1Q9NP99 RNU6-521P-201ENST00000516663 105 ntBASIC-1.95□□□□□ -2.72
TREM1Q9NP99 RNU6-980P-201ENST00000516925 103 ntBASIC-1.95□□□□□ -2.72
TREM1Q9NP99 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.96□□□□□ -2.72
TREM1Q9NP99 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.96□□□□□ -2.72
TREM1Q9NP99 RNU6-101P-201ENST00000410323 104 ntBASIC-1.96□□□□□ -2.72
TREM1Q9NP99 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.96□□□□□ -2.72
TREM1Q9NP99 RNU6-1143P-201ENST00000516125 104 ntBASIC-1.96□□□□□ -2.72
TREM1Q9NP99 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.96□□□□□ -2.72
TREM1Q9NP99 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.96□□□□□ -2.72
TREM1Q9NP99 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.96□□□□□ -2.72
TREM1Q9NP99 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.96□□□□□ -2.72
TREM1Q9NP99 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.96□□□□□ -2.72
TREM1Q9NP99 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.96□□□□□ -2.72
TREM1Q9NP99 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.97□□□□□ -2.72
TREM1Q9NP99 Y_RNA.276-201ENST00000364732 109 ntBASIC-1.97□□□□□ -2.72
TREM1Q9NP99 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.97□□□□□ -2.72
TREM1Q9NP99 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.97□□□□□ -2.72
TREM1Q9NP99 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.97□□□□□ -2.72
TREM1Q9NP99 FGF7P7-201ENST00000514120 227 ntBASIC-1.97□□□□□ -2.72
TREM1Q9NP99 AL132765.2-201ENST00000610812 351 ntBASIC-1.97□□□□□ -2.72
TREM1Q9NP99 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.98□□□□□ -2.73
TREM1Q9NP99 RNU6-495P-201ENST00000362995 107 ntBASIC-1.98□□□□□ -2.73
TREM1Q9NP99 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.98□□□□□ -2.73
TREM1Q9NP99 MIR496-201ENST00000385226 102 ntBASIC-1.98□□□□□ -2.73
TREM1Q9NP99 AL353691.2-201ENST00000443795 59 ntBASIC-1.98□□□□□ -2.73
TREM1Q9NP99 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.98□□□□□ -2.73
TREM1Q9NP99 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.99□□□□□ -2.73
TREM1Q9NP99 RNU6-450P-201ENST00000364654 107 ntBASIC-1.99□□□□□ -2.73
TREM1Q9NP99 RNU6-643P-201ENST00000384018 107 ntBASIC-1.99□□□□□ -2.73
TREM1Q9NP99 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.99□□□□□ -2.73
TREM1Q9NP99 MIR1207-201ENST00000408249 87 ntBASIC-1.99□□□□□ -2.73
TREM1Q9NP99 MIR1255B2-201ENST00000408618 67 ntBASIC-1.99□□□□□ -2.73
TREM1Q9NP99 MTATP6P21-201ENST00000440681 189 ntBASIC-1.99□□□□□ -2.73
TREM1Q9NP99 RNY3P15-201ENST00000516297 97 ntBASIC-1.99□□□□□ -2.73
TREM1Q9NP99 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.99□□□□□ -2.73
TREM1Q9NP99 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-1.99□□□□□ -2.73
TREM1Q9NP99 RNU6-578P-201ENST00000390980 103 ntBASIC-2□□□□□ -2.73
TREM1Q9NP99 Y_RNA.590-201ENST00000410140 107 ntBASIC-2□□□□□ -2.73
TREM1Q9NP99 ELOCP20-201ENST00000422460 345 ntBASIC-2□□□□□ -2.73
TREM1Q9NP99 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2□□□□□ -2.73
TREM1Q9NP99 RNU6-75P-201ENST00000515944 104 ntBASIC-2□□□□□ -2.73
TREM1Q9NP99 RNU6-1333P-201ENST00000516162 93 ntBASIC-2□□□□□ -2.73
TREM1Q9NP99 MIR3139-201ENST00000579145 76 ntBASIC-2□□□□□ -2.73
TREM1Q9NP99 Y_RNA.84-201ENST00000363011 104 ntBASIC-2.01□□□□□ -2.73
TREM1Q9NP99 RNA5SP405-201ENST00000363059 114 ntBASIC-2.01□□□□□ -2.73
TREM1Q9NP99 Y_RNA.315-201ENST00000365117 102 ntBASIC-2.01□□□□□ -2.73
TREM1Q9NP99 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.01□□□□□ -2.73
TREM1Q9NP99 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.01□□□□□ -2.73
TREM1Q9NP99 AC090971.5-201ENST00000621102 293 ntBASIC-2.01□□□□□ -2.73
TREM1Q9NP99 RNU6-79P-201ENST00000362511 107 ntBASIC-2.02□□□□□ -2.73
TREM1Q9NP99 RNU6-80P-201ENST00000384195 107 ntBASIC-2.02□□□□□ -2.73
TREM1Q9NP99 MIR548G-201ENST00000408442 89 ntBASIC-2.02□□□□□ -2.73
TREM1Q9NP99 MTND3P22-201ENST00000510932 243 ntBASIC-2.02□□□□□ -2.73
TREM1Q9NP99 AP002795.1-201ENST00000534879 84 ntBASIC-2.02□□□□□ -2.73
TREM1Q9NP99 MIR4282-201ENST00000583613 67 ntBASIC-2.02□□□□□ -2.73
TREM1Q9NP99 Y_RNA.262-201ENST00000364641 102 ntBASIC-2.03□□□□□ -2.73
TREM1Q9NP99 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.03□□□□□ -2.73
TREM1Q9NP99 RNU6-651P-201ENST00000411040 105 ntBASIC-2.03□□□□□ -2.73
TREM1Q9NP99 AL589823.1-201ENST00000429577 183 ntBASIC-2.03□□□□□ -2.73
TREM1Q9NP99 AC090616.4-201ENST00000448026 115 ntBASIC-2.03□□□□□ -2.73
TREM1Q9NP99 RNU6-1234P-201ENST00000516877 103 ntBASIC-2.03□□□□□ -2.73
TREM1Q9NP99 RNU6-90P-201ENST00000606352 106 ntBASIC-2.03□□□□□ -2.73
TREM1Q9NP99 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.04□□□□□ -2.74
TREM1Q9NP99 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.04□□□□□ -2.74
TREM1Q9NP99 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.04□□□□□ -2.74
TREM1Q9NP99 SNORD116-4-201ENST00000384733 96 ntBASIC-2.04□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms