Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 MIR598-201ENST00000384868 97 ntBASIC-0.13□□□□□ -2.43
CHMP1AQ9HD42 MIR516B1-201ENST00000385211 90 ntBASIC-0.13□□□□□ -2.43
CHMP1AQ9HD42 SNORA75.1-201ENST00000391130 148 ntBASIC-0.13□□□□□ -2.43
CHMP1AQ9HD42 RNU6-180P-201ENST00000516697 61 ntBASIC-0.13□□□□□ -2.43
CHMP1AQ9HD42 MIR4460-201ENST00000577862 86 ntBASIC-0.13□□□□□ -2.43
CHMP1AQ9HD42 YWHAEP2-201ENST00000580066 112 ntBASIC-0.13□□□□□ -2.43
CHMP1AQ9HD42 MIR4696-201ENST00000581431 70 ntBASIC-0.13□□□□□ -2.43
CHMP1AQ9HD42 AC084368.1-201ENST00000620935 65 ntBASIC-0.13□□□□□ -2.43
CHMP1AQ9HD42 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.14□□□□□ -2.43
CHMP1AQ9HD42 RNU7-159P-201ENST00000459284 62 ntBASIC-0.14□□□□□ -2.43
CHMP1AQ9HD42 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.14□□□□□ -2.43
CHMP1AQ9HD42 RNU6-664P-201ENST00000362381 107 ntBASIC-0.15□□□□□ -2.43
CHMP1AQ9HD42 RNU6-81P-201ENST00000365608 104 ntBASIC-0.15□□□□□ -2.43
CHMP1AQ9HD42 SNORD101-201ENST00000384027 73 ntBASIC-0.15□□□□□ -2.43
CHMP1AQ9HD42 MT-TY-201ENST00000387409 66 ntBASIC-0.15□□□□□ -2.43
CHMP1AQ9HD42 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.15□□□□□ -2.43
CHMP1AQ9HD42 SNORD116-21-201ENST00000384507 92 ntBASIC-0.16□□□□□ -2.44
CHMP1AQ9HD42 RNU6-880P-201ENST00000384526 107 ntBASIC-0.16□□□□□ -2.44
CHMP1AQ9HD42 MIR548M-201ENST00000408260 86 ntBASIC-0.16□□□□□ -2.44
CHMP1AQ9HD42 RNU6-75P-201ENST00000515944 104 ntBASIC-0.16□□□□□ -2.44
CHMP1AQ9HD42 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.16□□□□□ -2.44
CHMP1AQ9HD42 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.16□□□□□ -2.44
CHMP1AQ9HD42 MIR4439-201ENST00000583746 80 ntBASIC-0.16□□□□□ -2.44
CHMP1AQ9HD42 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.16□□□□□ -2.44
CHMP1AQ9HD42 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.17□□□□□ -2.44
CHMP1AQ9HD42 SNORD45B-201ENST00000364617 72 ntBASIC-0.17□□□□□ -2.44
CHMP1AQ9HD42 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.17□□□□□ -2.44
CHMP1AQ9HD42 MIR518E-201ENST00000385252 88 ntBASIC-0.17□□□□□ -2.44
CHMP1AQ9HD42 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.17□□□□□ -2.44
CHMP1AQ9HD42 AL513043.2-201ENST00000573941 143 ntBASIC-0.17□□□□□ -2.44
CHMP1AQ9HD42 MIR548AE1-201ENST00000583292 70 ntBASIC-0.17□□□□□ -2.44
CHMP1AQ9HD42 MIR6514-201ENST00000622549 70 ntBASIC-0.17□□□□□ -2.44
CHMP1AQ9HD42 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.17□□□□□ -2.44
CHMP1AQ9HD42 uc_338.10-201ENST00000621872 182 ntBASIC-0.18□□□□□ -2.44
CHMP1AQ9HD42 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.19□□□□□ -2.44
CHMP1AQ9HD42 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.19□□□□□ -2.44
CHMP1AQ9HD42 AL365222.1-201ENST00000614661 98 ntBASIC-0.19□□□□□ -2.44
CHMP1AQ9HD42 MIR371B-201ENST00000638082 66 ntBASIC-0.19□□□□□ -2.44
CHMP1AQ9HD42 RNU6-813P-201ENST00000384691 107 ntBASIC-0.2□□□□□ -2.44
CHMP1AQ9HD42 AC008267.6-201ENST00000441664 139 ntBASIC-0.2□□□□□ -2.44
CHMP1AQ9HD42 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.2□□□□□ -2.44
CHMP1AQ9HD42 RNU7-85P-201ENST00000458851 63 ntBASIC-0.2□□□□□ -2.44
CHMP1AQ9HD42 RNU6-412P-201ENST00000516434 106 ntBASIC-0.2□□□□□ -2.44
CHMP1AQ9HD42 CR383656.4-201ENST00000546909 122 ntBASIC-0.2□□□□□ -2.44
CHMP1AQ9HD42 MIR548Z-201ENST00000584743 97 ntBASIC-0.2□□□□□ -2.44
CHMP1AQ9HD42 AC103810.7-201ENST00000607821 91 ntBASIC-0.2□□□□□ -2.44
CHMP1AQ9HD42 RN7SL660P-201ENST00000614852 299 ntBASIC-0.2□□□□□ -2.44
CHMP1AQ9HD42 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.2□□□□□ -2.44
CHMP1AQ9HD42 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.2□□□□□ -2.44
CHMP1AQ9HD42 MIR106A-201ENST00000384870 81 ntBASIC-0.21□□□□□ -2.44
CHMP1AQ9HD42 RNU6-935P-201ENST00000410371 100 ntBASIC-0.21□□□□□ -2.44
CHMP1AQ9HD42 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.21□□□□□ -2.44
CHMP1AQ9HD42 RNU7-188P-201ENST00000517063 64 ntBASIC-0.21□□□□□ -2.44
CHMP1AQ9HD42 RN7SL793P-201ENST00000583259 296 ntBASIC-0.21□□□□□ -2.44
CHMP1AQ9HD42 MIR4777-201ENST00000583710 86 ntBASIC-0.21□□□□□ -2.44
CHMP1AQ9HD42 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.22□□□□□ -2.44
CHMP1AQ9HD42 RNU4-36P-201ENST00000364294 144 ntBASIC-0.22□□□□□ -2.44
CHMP1AQ9HD42 RNY1P4-201ENST00000384595 115 ntBASIC-0.22□□□□□ -2.44
CHMP1AQ9HD42 SNORA19.1-201ENST00000410656 129 ntBASIC-0.22□□□□□ -2.44
CHMP1AQ9HD42 snoU13.18-201ENST00000459483 104 ntBASIC-0.22□□□□□ -2.44
CHMP1AQ9HD42 AC104692.1-201ENST00000472406 90 ntBASIC-0.22□□□□□ -2.44
CHMP1AQ9HD42 RNU6-795P-201ENST00000516323 103 ntBASIC-0.22□□□□□ -2.44
CHMP1AQ9HD42 AC012531.4-201ENST00000616509 177 ntBASIC-0.22□□□□□ -2.44
CHMP1AQ9HD42 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.23□□□□□ -2.45
CHMP1AQ9HD42 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.23□□□□□ -2.45
CHMP1AQ9HD42 MIR5190-201ENST00000581537 80 ntBASIC-0.23□□□□□ -2.45
CHMP1AQ9HD42 MIR4536-1-201ENST00000583537 88 ntBASIC-0.23□□□□□ -2.45
CHMP1AQ9HD42 MIR548O2-201ENST00000616090 70 ntBASIC-0.23□□□□□ -2.45
CHMP1AQ9HD42 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.24□□□□□ -2.45
CHMP1AQ9HD42 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.24□□□□□ -2.45
CHMP1AQ9HD42 RNU6-154P-201ENST00000384306 106 ntBASIC-0.24□□□□□ -2.45
CHMP1AQ9HD42 RNU6-644P-201ENST00000391155 98 ntBASIC-0.24□□□□□ -2.45
CHMP1AQ9HD42 RNU6-904P-201ENST00000516206 101 ntBASIC-0.24□□□□□ -2.45
CHMP1AQ9HD42 RNU6-65P-201ENST00000516332 98 ntBASIC-0.24□□□□□ -2.45
CHMP1AQ9HD42 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.25□□□□□ -2.45
CHMP1AQ9HD42 MIR148A-201ENST00000362215 68 ntBASIC-0.25□□□□□ -2.45
CHMP1AQ9HD42 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.25□□□□□ -2.45
CHMP1AQ9HD42 RNU6-476P-201ENST00000384726 107 ntBASIC-0.25□□□□□ -2.45
CHMP1AQ9HD42 MIR193B-201ENST00000384907 83 ntBASIC-0.25□□□□□ -2.45
CHMP1AQ9HD42 MIR451A-201ENST00000385059 72 ntBASIC-0.25□□□□□ -2.45
CHMP1AQ9HD42 MIR216B-201ENST00000390186 82 ntBASIC-0.25□□□□□ -2.45
CHMP1AQ9HD42 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.25□□□□□ -2.45
CHMP1AQ9HD42 MIR1295B-201ENST00000636144 60 ntBASIC-0.25□□□□□ -2.45
CHMP1AQ9HD42 RNU6V-201ENST00000384105 107 ntBASIC-0.26□□□□□ -2.45
CHMP1AQ9HD42 RNU6-175P-201ENST00000516896 107 ntBASIC-0.26□□□□□ -2.45
CHMP1AQ9HD42 RNU6-46P-201ENST00000383860 107 ntBASIC-0.27□□□□□ -2.45
CHMP1AQ9HD42 RNA5SP63-201ENST00000391225 112 ntBASIC-0.27□□□□□ -2.45
CHMP1AQ9HD42 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.27□□□□□ -2.45
CHMP1AQ9HD42 RNA5SP205-201ENST00000364653 136 ntBASIC-0.28□□□□□ -2.45
CHMP1AQ9HD42 SNORD114-29-201ENST00000364819 70 ntBASIC-0.28□□□□□ -2.45
CHMP1AQ9HD42 RNU6-132P-201ENST00000383863 107 ntBASIC-0.28□□□□□ -2.45
CHMP1AQ9HD42 MIR652-201ENST00000385278 98 ntBASIC-0.28□□□□□ -2.45
CHMP1AQ9HD42 SCARNA23-201ENST00000516060 130 ntBASIC-0.28□□□□□ -2.45
CHMP1AQ9HD42 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.28□□□□□ -2.45
CHMP1AQ9HD42 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.28□□□□□ -2.45
CHMP1AQ9HD42 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.28□□□□□ -2.45
CHMP1AQ9HD42 MIR330-201ENST00000362196 94 ntBASIC-0.29□□□□□ -2.46
CHMP1AQ9HD42 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.29□□□□□ -2.46
CHMP1AQ9HD42 RNU6-22P-201ENST00000384355 107 ntBASIC-0.29□□□□□ -2.46
CHMP1AQ9HD42 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 202 ms