Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC006210.1-201ENST00000424882 111 ntBASIC0.09□□□□□ -2.4
CCDC28BQ9BUN5 Y_RNA.648-201ENST00000459455 110 ntBASIC0.09□□□□□ -2.4
CCDC28BQ9BUN5 RNU7-129P-201ENST00000516128 62 ntBASIC0.09□□□□□ -2.4
CCDC28BQ9BUN5 RNU6-782P-201ENST00000516852 104 ntBASIC0.09□□□□□ -2.4
CCDC28BQ9BUN5 MIR4743-201ENST00000584576 69 ntBASIC0.09□□□□□ -2.4
CCDC28BQ9BUN5 MIR548AD-201ENST00000584780 82 ntBASIC0.09□□□□□ -2.4
CCDC28BQ9BUN5 AC023932.2-201ENST00000603176 175 ntBASIC0.09□□□□□ -2.4
CCDC28BQ9BUN5 RNU6-957P-201ENST00000363652 99 ntBASIC0.08□□□□□ -2.4
CCDC28BQ9BUN5 RNU1-141P-201ENST00000364623 158 ntBASIC0.08□□□□□ -2.4
CCDC28BQ9BUN5 RNU6-652P-201ENST00000365488 107 ntBASIC0.08□□□□□ -2.4
CCDC28BQ9BUN5 MIR519E-201ENST00000385075 84 ntBASIC0.08□□□□□ -2.4
CCDC28BQ9BUN5 MIR610-201ENST00000385139 96 ntBASIC0.08□□□□□ -2.4
CCDC28BQ9BUN5 MIR892B-201ENST00000401279 77 ntBASIC0.08□□□□□ -2.4
CCDC28BQ9BUN5 RNA5SP484-201ENST00000458857 111 ntBASIC0.08□□□□□ -2.4
CCDC28BQ9BUN5 MIR2113-201ENST00000459007 91 ntBASIC0.08□□□□□ -2.4
CCDC28BQ9BUN5 RNU6-287P-201ENST00000516230 98 ntBASIC0.08□□□□□ -2.4
CCDC28BQ9BUN5 NAMPTP3-201ENST00000569273 224 ntBASIC0.08□□□□□ -2.4
CCDC28BQ9BUN5 MIR548AG2-201ENST00000581228 64 ntBASIC0.08□□□□□ -2.4
CCDC28BQ9BUN5 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.08□□□□□ -2.4
CCDC28BQ9BUN5 RNA5SP214-201ENST00000363378 118 ntBASIC0.07□□□□□ -2.4
CCDC28BQ9BUN5 Y_RNA.283-201ENST00000364798 112 ntBASIC0.07□□□□□ -2.4
CCDC28BQ9BUN5 RNU6-813P-201ENST00000384691 107 ntBASIC0.07□□□□□ -2.4
CCDC28BQ9BUN5 MIR501-201ENST00000390204 84 ntBASIC0.07□□□□□ -2.4
CCDC28BQ9BUN5 MIR1302-5-201ENST00000408164 150 ntBASIC0.07□□□□□ -2.4
CCDC28BQ9BUN5 RNU2-51P-201ENST00000410708 197 ntBASIC0.07□□□□□ -2.4
CCDC28BQ9BUN5 AC093423.1-201ENST00000440817 142 ntBASIC0.07□□□□□ -2.4
CCDC28BQ9BUN5 RNU6-904P-201ENST00000516206 101 ntBASIC0.07□□□□□ -2.4
CCDC28BQ9BUN5 RNU6-1232P-201ENST00000516299 86 ntBASIC0.07□□□□□ -2.4
CCDC28BQ9BUN5 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.07□□□□□ -2.4
CCDC28BQ9BUN5 U6.100-201ENST00000636230 99 ntBASIC0.07□□□□□ -2.4
CCDC28BQ9BUN5 MIR499B-201ENST00000636498 73 ntBASIC0.07□□□□□ -2.4
CCDC28BQ9BUN5 Y_RNA.96-201ENST00000363092 109 ntBASIC0.06□□□□□ -2.4
CCDC28BQ9BUN5 Y_RNA.125-201ENST00000363371 111 ntBASIC0.06□□□□□ -2.4
CCDC28BQ9BUN5 SNORD114-9-201ENST00000364370 72 ntBASIC0.06□□□□□ -2.4
CCDC28BQ9BUN5 MIR216B-201ENST00000390186 82 ntBASIC0.06□□□□□ -2.4
CCDC28BQ9BUN5 AC069503.3-201ENST00000618674 145 ntBASIC0.06□□□□□ -2.4
CCDC28BQ9BUN5 Y_RNA.207-201ENST00000364142 106 ntBASIC0.05□□□□□ -2.4
CCDC28BQ9BUN5 Y_RNA.273-201ENST00000364703 102 ntBASIC0.05□□□□□ -2.4
CCDC28BQ9BUN5 SNORD101-201ENST00000384027 73 ntBASIC0.05□□□□□ -2.4
CCDC28BQ9BUN5 RNU6-644P-201ENST00000391155 98 ntBASIC0.05□□□□□ -2.4
CCDC28BQ9BUN5 AL161932.1-201ENST00000437408 146 ntBASIC0.05□□□□□ -2.4
CCDC28BQ9BUN5 snoU13.11-201ENST00000459219 104 ntBASIC0.05□□□□□ -2.4
CCDC28BQ9BUN5 Y_RNA.660-201ENST00000516002 120 ntBASIC0.05□□□□□ -2.4
CCDC28BQ9BUN5 SCARNA23-201ENST00000516060 130 ntBASIC0.05□□□□□ -2.4
CCDC28BQ9BUN5 RNU6-589P-201ENST00000516485 107 ntBASIC0.05□□□□□ -2.4
CCDC28BQ9BUN5 RNA5SP330-201ENST00000517096 96 ntBASIC0.05□□□□□ -2.4
CCDC28BQ9BUN5 AL513043.2-201ENST00000573941 143 ntBASIC0.05□□□□□ -2.4
CCDC28BQ9BUN5 MIR4677-201ENST00000584153 80 ntBASIC0.05□□□□□ -2.4
CCDC28BQ9BUN5 AC104408.1-201ENST00000605241 170 ntBASIC0.05□□□□□ -2.4
CCDC28BQ9BUN5 AC025521.1-201ENST00000621624 286 ntBASIC0.05□□□□□ -2.4
CCDC28BQ9BUN5 RNU6-664P-201ENST00000362381 107 ntBASIC0.04□□□□□ -2.4
CCDC28BQ9BUN5 SNORA51.5-201ENST00000384126 131 ntBASIC0.04□□□□□ -2.4
CCDC28BQ9BUN5 RNU6-1113P-201ENST00000384348 107 ntBASIC0.04□□□□□ -2.4
CCDC28BQ9BUN5 RNA5SP63-201ENST00000391225 112 ntBASIC0.04□□□□□ -2.4
CCDC28BQ9BUN5 MIR1197-201ENST00000408818 88 ntBASIC0.04□□□□□ -2.4
CCDC28BQ9BUN5 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.04□□□□□ -2.4
CCDC28BQ9BUN5 MIR4696-201ENST00000581431 70 ntBASIC0.04□□□□□ -2.4
CCDC28BQ9BUN5 MIR6129-201ENST00000616087 109 ntBASIC0.04□□□□□ -2.4
CCDC28BQ9BUN5 RNU6-161P-201ENST00000363051 106 ntBASIC0.03□□□□□ -2.4
CCDC28BQ9BUN5 Y_RNA.115-201ENST00000363272 98 ntBASIC0.03□□□□□ -2.4
CCDC28BQ9BUN5 HMGN2P22-201ENST00000427588 175 ntBASIC0.03□□□□□ -2.4
CCDC28BQ9BUN5 SNORA25.13-201ENST00000516395 103 ntBASIC0.03□□□□□ -2.4
CCDC28BQ9BUN5 RNU6-406P-201ENST00000516470 107 ntBASIC0.03□□□□□ -2.4
CCDC28BQ9BUN5 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.03□□□□□ -2.4
CCDC28BQ9BUN5 MIR4777-201ENST00000583710 86 ntBASIC0.03□□□□□ -2.4
CCDC28BQ9BUN5 Y_RNA.258-201ENST00000364613 105 ntBASIC0.02□□□□□ -2.41
CCDC28BQ9BUN5 Y_RNA.467-201ENST00000384297 102 ntBASIC0.02□□□□□ -2.41
CCDC28BQ9BUN5 RNU6-106P-201ENST00000384405 107 ntBASIC0.02□□□□□ -2.41
CCDC28BQ9BUN5 MIR643-201ENST00000385267 97 ntBASIC0.02□□□□□ -2.41
CCDC28BQ9BUN5 SNORA75.1-201ENST00000391130 148 ntBASIC0.02□□□□□ -2.41
CCDC28BQ9BUN5 RNU6-972P-201ENST00000391208 107 ntBASIC0.02□□□□□ -2.41
CCDC28BQ9BUN5 RNU6-75P-201ENST00000515944 104 ntBASIC0.02□□□□□ -2.41
CCDC28BQ9BUN5 Y_RNA.705-201ENST00000516862 110 ntBASIC0.02□□□□□ -2.41
CCDC28BQ9BUN5 RNU6-1057P-201ENST00000517162 102 ntBASIC0.02□□□□□ -2.41
CCDC28BQ9BUN5 MIR4460-201ENST00000577862 86 ntBASIC0.02□□□□□ -2.41
CCDC28BQ9BUN5 MIR4536-1-201ENST00000583537 88 ntBASIC0.02□□□□□ -2.41
CCDC28BQ9BUN5 MIR4768-201ENST00000585270 74 ntBASIC0.02□□□□□ -2.41
CCDC28BQ9BUN5 AC103810.7-201ENST00000607821 91 ntBASIC0.02□□□□□ -2.41
CCDC28BQ9BUN5 MIR371B-201ENST00000638082 66 ntBASIC0.02□□□□□ -2.41
CCDC28BQ9BUN5 RNU6-1081P-201ENST00000384537 107 ntBASIC0.01□□□□□ -2.41
CCDC28BQ9BUN5 MT-TY-201ENST00000387409 66 ntBASIC0.01□□□□□ -2.41
CCDC28BQ9BUN5 RNU6-935P-201ENST00000410371 100 ntBASIC0.01□□□□□ -2.41
CCDC28BQ9BUN5 RNU4-61P-201ENST00000411243 107 ntBASIC0.01□□□□□ -2.41
CCDC28BQ9BUN5 AL606753.1-201ENST00000427435 87 ntBASIC0.01□□□□□ -2.41
CCDC28BQ9BUN5 RNU6-65P-201ENST00000516332 98 ntBASIC0.01□□□□□ -2.41
CCDC28BQ9BUN5 MIR6718-201ENST00000616153 80 ntBASIC0.01□□□□□ -2.41
CCDC28BQ9BUN5 AC012531.4-201ENST00000616509 177 ntBASIC0.01□□□□□ -2.41
CCDC28BQ9BUN5 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.01□□□□□ -2.41
CCDC28BQ9BUN5 RNA5SP457-201ENST00000363657 124 ntBASIC0□□□□□ -2.41
CCDC28BQ9BUN5 RNA5SP325-201ENST00000363756 130 ntBASIC0□□□□□ -2.41
CCDC28BQ9BUN5 Y_RNA.239-201ENST00000364444 113 ntBASIC0□□□□□ -2.41
CCDC28BQ9BUN5 MIR548H2-201ENST00000408874 88 ntBASIC0□□□□□ -2.41
CCDC28BQ9BUN5 RNU6-554P-201ENST00000410466 106 ntBASIC0□□□□□ -2.41
CCDC28BQ9BUN5 SNORA19.1-201ENST00000410656 129 ntBASIC0□□□□□ -2.41
CCDC28BQ9BUN5 Y_RNA.629-201ENST00000411368 105 ntBASIC0□□□□□ -2.41
CCDC28BQ9BUN5 RNU6-795P-201ENST00000516323 103 ntBASIC0□□□□□ -2.41
CCDC28BQ9BUN5 Y_RNA.709-201ENST00000516952 92 ntBASIC0□□□□□ -2.41
CCDC28BQ9BUN5 RNU6-537P-201ENST00000517277 103 ntBASIC0□□□□□ -2.41
CCDC28BQ9BUN5 MIR4290-201ENST00000583807 95 ntBASIC0□□□□□ -2.41
CCDC28BQ9BUN5 Y_RNA.818-201ENST00000618813 71 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms