Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.06□□□□□ -2.58
RPRD1AQ96P16 AC141273.2-201ENST00000618989 130 ntBASIC-1.06□□□□□ -2.58
RPRD1AQ96P16 RNU6-235P-201ENST00000362644 107 ntBASIC-1.07□□□□□ -2.58
RPRD1AQ96P16 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.07□□□□□ -2.58
RPRD1AQ96P16 RNU4-11P-201ENST00000365287 132 ntBASIC-1.07□□□□□ -2.58
RPRD1AQ96P16 RNY1P7-201ENST00000384743 110 ntBASIC-1.07□□□□□ -2.58
RPRD1AQ96P16 MIR759-201ENST00000390224 91 ntBASIC-1.07□□□□□ -2.58
RPRD1AQ96P16 RNU6-460P-201ENST00000391158 108 ntBASIC-1.07□□□□□ -2.58
RPRD1AQ96P16 RNU7-197P-201ENST00000458836 62 ntBASIC-1.07□□□□□ -2.58
RPRD1AQ96P16 RNU7-55P-201ENST00000459426 62 ntBASIC-1.07□□□□□ -2.58
RPRD1AQ96P16 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.07□□□□□ -2.58
RPRD1AQ96P16 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.07□□□□□ -2.58
RPRD1AQ96P16 SNORA63-201ENST00000363450 132 ntBASIC-1.08□□□□□ -2.58
RPRD1AQ96P16 RNU6-915P-201ENST00000364943 103 ntBASIC-1.08□□□□□ -2.58
RPRD1AQ96P16 MIR548D2-201ENST00000384955 97 ntBASIC-1.08□□□□□ -2.58
RPRD1AQ96P16 RN7SKP19-201ENST00000516016 252 ntBASIC-1.08□□□□□ -2.58
RPRD1AQ96P16 AC072026.1-201ENST00000605023 201 ntBASIC-1.08□□□□□ -2.58
RPRD1AQ96P16 MIR6851-201ENST00000617060 67 ntBASIC-1.08□□□□□ -2.58
RPRD1AQ96P16 RNU6-363P-201ENST00000362895 105 ntBASIC-1.09□□□□□ -2.58
RPRD1AQ96P16 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.09□□□□□ -2.58
RPRD1AQ96P16 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.09□□□□□ -2.58
RPRD1AQ96P16 snoU13.11-201ENST00000459219 104 ntBASIC-1.09□□□□□ -2.58
RPRD1AQ96P16 SNORD38.3-201ENST00000516599 73 ntBASIC-1.09□□□□□ -2.58
RPRD1AQ96P16 AP002392.1-201ENST00000537692 208 ntBASIC-1.09□□□□□ -2.58
RPRD1AQ96P16 RNU6-86P-201ENST00000606534 107 ntBASIC-1.09□□□□□ -2.58
RPRD1AQ96P16 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.1□□□□□ -2.59
RPRD1AQ96P16 RNU6-935P-201ENST00000410371 100 ntBASIC-1.1□□□□□ -2.59
RPRD1AQ96P16 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.1□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.11□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.11□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.11□□□□□ -2.59
RPRD1AQ96P16 MIR582-201ENST00000365731 98 ntBASIC-1.11□□□□□ -2.59
RPRD1AQ96P16 MIR1263-201ENST00000408324 86 ntBASIC-1.11□□□□□ -2.59
RPRD1AQ96P16 RNA5SP136-201ENST00000410906 107 ntBASIC-1.11□□□□□ -2.59
RPRD1AQ96P16 AC021146.6-201ENST00000514659 117 ntBASIC-1.11□□□□□ -2.59
RPRD1AQ96P16 SNORA40.17-201ENST00000517256 115 ntBASIC-1.11□□□□□ -2.59
RPRD1AQ96P16 RNU6-54P-201ENST00000365563 107 ntBASIC-1.12□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.12□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.12□□□□□ -2.59
RPRD1AQ96P16 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.12□□□□□ -2.59
RPRD1AQ96P16 RNU6-762P-201ENST00000517107 102 ntBASIC-1.12□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.13□□□□□ -2.59
RPRD1AQ96P16 RNU6-409P-201ENST00000384114 104 ntBASIC-1.13□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.13□□□□□ -2.59
RPRD1AQ96P16 SNORD83B-201ENST00000386745 93 ntBASIC-1.13□□□□□ -2.59
RPRD1AQ96P16 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.13□□□□□ -2.59
RPRD1AQ96P16 RNU6-881P-201ENST00000516813 102 ntBASIC-1.13□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.14□□□□□ -2.59
RPRD1AQ96P16 RNU6-647P-201ENST00000364243 107 ntBASIC-1.14□□□□□ -2.59
RPRD1AQ96P16 MIR548E-201ENST00000408287 88 ntBASIC-1.14□□□□□ -2.59
RPRD1AQ96P16 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.14□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.15□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.15□□□□□ -2.59
RPRD1AQ96P16 MIR451A-201ENST00000385059 72 ntBASIC-1.15□□□□□ -2.59
RPRD1AQ96P16 RNU6-721P-201ENST00000410155 105 ntBASIC-1.15□□□□□ -2.59
RPRD1AQ96P16 AL118496.2-201ENST00000448300 230 ntBASIC-1.15□□□□□ -2.59
RPRD1AQ96P16 SNORD2-201ENST00000459163 69 ntBASIC-1.15□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.15□□□□□ -2.59
RPRD1AQ96P16 AC097510.1-201ENST00000510945 133 ntBASIC-1.15□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.15□□□□□ -2.59
RPRD1AQ96P16 AL442128.1-201ENST00000615151 90 ntBASIC-1.15□□□□□ -2.59
RPRD1AQ96P16 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.16□□□□□ -2.6
RPRD1AQ96P16 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
RPRD1AQ96P16 RNU6-151P-201ENST00000364158 107 ntBASIC-1.17□□□□□ -2.6
RPRD1AQ96P16 RNU6-973P-201ENST00000364690 107 ntBASIC-1.17□□□□□ -2.6
RPRD1AQ96P16 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.17□□□□□ -2.6
RPRD1AQ96P16 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.17□□□□□ -2.6
RPRD1AQ96P16 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.17□□□□□ -2.6
RPRD1AQ96P16 SNORA13-201ENST00000458790 133 ntBASIC-1.17□□□□□ -2.6
RPRD1AQ96P16 SCARNA17-201ENST00000516183 144 ntBASIC-1.17□□□□□ -2.6
RPRD1AQ96P16 SNORA81.3-201ENST00000517283 198 ntBASIC-1.17□□□□□ -2.6
RPRD1AQ96P16 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.18□□□□□ -2.6
RPRD1AQ96P16 RNU6-476P-201ENST00000384726 107 ntBASIC-1.18□□□□□ -2.6
RPRD1AQ96P16 RNU6-75P-201ENST00000515944 104 ntBASIC-1.18□□□□□ -2.6
RPRD1AQ96P16 RNU6-861P-201ENST00000516745 106 ntBASIC-1.18□□□□□ -2.6
RPRD1AQ96P16 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.19□□□□□ -2.6
RPRD1AQ96P16 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.19□□□□□ -2.6
RPRD1AQ96P16 RNU4-36P-201ENST00000364294 144 ntBASIC-1.19□□□□□ -2.6
RPRD1AQ96P16 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.19□□□□□ -2.6
RPRD1AQ96P16 RNU6-781P-201ENST00000516377 101 ntBASIC-1.19□□□□□ -2.6
RPRD1AQ96P16 RNA5SP67-201ENST00000516422 131 ntBASIC-1.19□□□□□ -2.6
RPRD1AQ96P16 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.19□□□□□ -2.6
RPRD1AQ96P16 RNU6-502P-201ENST00000362419 108 ntBASIC-1.2□□□□□ -2.6
RPRD1AQ96P16 SNORD114-25-201ENST00000363742 72 ntBASIC-1.2□□□□□ -2.6
RPRD1AQ96P16 SNORD114-4-201ENST00000363962 75 ntBASIC-1.2□□□□□ -2.6
RPRD1AQ96P16 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.2□□□□□ -2.6
RPRD1AQ96P16 U3.27-201ENST00000391237 200 ntBASIC-1.2□□□□□ -2.6
RPRD1AQ96P16 AL500527.2-201ENST00000454105 95 ntBASIC-1.2□□□□□ -2.6
RPRD1AQ96P16 SNORD42B-201ENST00000458893 67 ntBASIC-1.2□□□□□ -2.6
RPRD1AQ96P16 MIR5704-201ENST00000584029 77 ntBASIC-1.2□□□□□ -2.6
RPRD1AQ96P16 MTND5P18-201ENST00000445624 1801 ntBASIC-1.21□□□□□ -2.6
RPRD1AQ96P16 MIR409-201ENST00000362237 79 ntBASIC-1.21□□□□□ -2.6
RPRD1AQ96P16 RNU6-682P-201ENST00000363843 106 ntBASIC-1.21□□□□□ -2.6
RPRD1AQ96P16 RNU6-816P-201ENST00000390914 107 ntBASIC-1.21□□□□□ -2.6
RPRD1AQ96P16 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.21□□□□□ -2.6
RPRD1AQ96P16 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.21□□□□□ -2.6
RPRD1AQ96P16 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.21□□□□□ -2.6
RPRD1AQ96P16 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.22□□□□□ -2.6
RPRD1AQ96P16 MIR518B-201ENST00000385127 83 ntBASIC-1.22□□□□□ -2.6
RPRD1AQ96P16 AL158147.1-201ENST00000443970 75 ntBASIC-1.22□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms