Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 MIR147A-201ENST00000385079 72 ntBASIC-0.69□□□□□ -2.52
LMX1AQ8TE12 MIR548G-201ENST00000408442 89 ntBASIC-0.69□□□□□ -2.52
LMX1AQ8TE12 RNU6-935P-201ENST00000410371 100 ntBASIC-0.69□□□□□ -2.52
LMX1AQ8TE12 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.69□□□□□ -2.52
LMX1AQ8TE12 SPINT5P-201ENST00000448174 155 ntBASIC-0.69□□□□□ -2.52
LMX1AQ8TE12 SNORD57-201ENST00000448188 72 ntBASIC-0.69□□□□□ -2.52
LMX1AQ8TE12 RNU7-85P-201ENST00000458851 63 ntBASIC-0.69□□□□□ -2.52
LMX1AQ8TE12 RNU7-134P-201ENST00000458997 64 ntBASIC-0.69□□□□□ -2.52
LMX1AQ8TE12 AC107027.2-201ENST00000512197 115 ntBASIC-0.69□□□□□ -2.52
LMX1AQ8TE12 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.69□□□□□ -2.52
LMX1AQ8TE12 RNU7-121P-201ENST00000516604 62 ntBASIC-0.69□□□□□ -2.52
LMX1AQ8TE12 RNU6-719P-201ENST00000516671 104 ntBASIC-0.69□□□□□ -2.52
LMX1AQ8TE12 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.69□□□□□ -2.52
LMX1AQ8TE12 AC021753.1-201ENST00000635724 168 ntBASIC-0.69□□□□□ -2.52
LMX1AQ8TE12 MIR382-201ENST00000637119 76 ntBASIC-0.69□□□□□ -2.52
LMX1AQ8TE12 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.7□□□□□ -2.52
LMX1AQ8TE12 RNU6-132P-201ENST00000383863 107 ntBASIC-0.7□□□□□ -2.52
LMX1AQ8TE12 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.7□□□□□ -2.52
LMX1AQ8TE12 SNORD38.2-201ENST00000384470 69 ntBASIC-0.7□□□□□ -2.52
LMX1AQ8TE12 RNY1P7-201ENST00000384743 110 ntBASIC-0.7□□□□□ -2.52
LMX1AQ8TE12 RNU7-197P-201ENST00000458836 62 ntBASIC-0.7□□□□□ -2.52
LMX1AQ8TE12 MIR3140-201ENST00000583685 90 ntBASIC-0.7□□□□□ -2.52
LMX1AQ8TE12 AC025521.1-201ENST00000621624 286 ntBASIC-0.7□□□□□ -2.52
LMX1AQ8TE12 RNU6-151P-201ENST00000364158 107 ntBASIC-0.71□□□□□ -2.52
LMX1AQ8TE12 SNORD18B-201ENST00000365659 72 ntBASIC-0.71□□□□□ -2.52
LMX1AQ8TE12 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.71□□□□□ -2.52
LMX1AQ8TE12 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.71□□□□□ -2.52
LMX1AQ8TE12 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.71□□□□□ -2.52
LMX1AQ8TE12 SCARNA18B-201ENST00000458806 135 ntBASIC-0.71□□□□□ -2.52
LMX1AQ8TE12 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.71□□□□□ -2.52
LMX1AQ8TE12 RNU6-138P-201ENST00000515952 107 ntBASIC-0.71□□□□□ -2.52
LMX1AQ8TE12 SCARNA17-201ENST00000516183 144 ntBASIC-0.71□□□□□ -2.52
LMX1AQ8TE12 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.71□□□□□ -2.52
LMX1AQ8TE12 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.71□□□□□ -2.52
LMX1AQ8TE12 AC068339.1-201ENST00000526965 141 ntBASIC-0.71□□□□□ -2.52
LMX1AQ8TE12 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.71□□□□□ -2.52
LMX1AQ8TE12 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.72□□□□□ -2.52
LMX1AQ8TE12 SNORA24B-201ENST00000384176 131 ntBASIC-0.72□□□□□ -2.52
LMX1AQ8TE12 SNORD83B-201ENST00000386745 93 ntBASIC-0.72□□□□□ -2.52
LMX1AQ8TE12 MIR3613-201ENST00000579844 87 ntBASIC-0.72□□□□□ -2.52
LMX1AQ8TE12 uc_338.19-201ENST00000616808 99 ntBASIC-0.72□□□□□ -2.52
LMX1AQ8TE12 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.73□□□□□ -2.53
LMX1AQ8TE12 SNORD38.1-201ENST00000363863 68 ntBASIC-0.73□□□□□ -2.53
LMX1AQ8TE12 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.73□□□□□ -2.53
LMX1AQ8TE12 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.73□□□□□ -2.53
LMX1AQ8TE12 MIR124-2-201ENST00000385081 109 ntBASIC-0.73□□□□□ -2.53
LMX1AQ8TE12 RNU6-460P-201ENST00000391158 108 ntBASIC-0.73□□□□□ -2.53
LMX1AQ8TE12 RNU6-466P-201ENST00000391224 103 ntBASIC-0.73□□□□□ -2.53
LMX1AQ8TE12 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.73□□□□□ -2.53
LMX1AQ8TE12 FGF7P7-201ENST00000514120 227 ntBASIC-0.73□□□□□ -2.53
LMX1AQ8TE12 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.73□□□□□ -2.53
LMX1AQ8TE12 RNU6-781P-201ENST00000516377 101 ntBASIC-0.73□□□□□ -2.53
LMX1AQ8TE12 RNA5SP470-201ENST00000516463 106 ntBASIC-0.73□□□□□ -2.53
LMX1AQ8TE12 AL117187.1-201ENST00000555482 181 ntBASIC-0.73□□□□□ -2.53
LMX1AQ8TE12 AC044792.1-201ENST00000593294 196 ntBASIC-0.73□□□□□ -2.53
LMX1AQ8TE12 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.73□□□□□ -2.53
LMX1AQ8TE12 MIR6888-201ENST00000621977 67 ntBASIC-0.73□□□□□ -2.53
LMX1AQ8TE12 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.74□□□□□ -2.53
LMX1AQ8TE12 SNORD114-17-201ENST00000364699 75 ntBASIC-0.74□□□□□ -2.53
LMX1AQ8TE12 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.74□□□□□ -2.53
LMX1AQ8TE12 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.74□□□□□ -2.53
LMX1AQ8TE12 MIR548D2-201ENST00000384955 97 ntBASIC-0.74□□□□□ -2.53
LMX1AQ8TE12 MT-TQ-201ENST00000387372 72 ntBASIC-0.74□□□□□ -2.53
LMX1AQ8TE12 RNU6-239P-201ENST00000390990 99 ntBASIC-0.74□□□□□ -2.53
LMX1AQ8TE12 SNORA13-201ENST00000458790 133 ntBASIC-0.74□□□□□ -2.53
LMX1AQ8TE12 RNU4-71P-201ENST00000516258 113 ntBASIC-0.74□□□□□ -2.53
LMX1AQ8TE12 RNU6-1153P-201ENST00000516760 105 ntBASIC-0.74□□□□□ -2.53
LMX1AQ8TE12 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.74□□□□□ -2.53
LMX1AQ8TE12 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.74□□□□□ -2.53
LMX1AQ8TE12 MIR548AX-201ENST00000580117 73 ntBASIC-0.74□□□□□ -2.53
LMX1AQ8TE12 RNU6-363P-201ENST00000362895 105 ntBASIC-0.75□□□□□ -2.53
LMX1AQ8TE12 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.75□□□□□ -2.53
LMX1AQ8TE12 RNU6-495P-201ENST00000362995 107 ntBASIC-0.75□□□□□ -2.53
LMX1AQ8TE12 SNORA63.6-201ENST00000364921 119 ntBASIC-0.75□□□□□ -2.53
LMX1AQ8TE12 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.75□□□□□ -2.53
LMX1AQ8TE12 MIR216B-201ENST00000390186 82 ntBASIC-0.75□□□□□ -2.53
LMX1AQ8TE12 RNU2-51P-201ENST00000410708 197 ntBASIC-0.75□□□□□ -2.53
LMX1AQ8TE12 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.75□□□□□ -2.53
LMX1AQ8TE12 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.75□□□□□ -2.53
LMX1AQ8TE12 MIR378F-201ENST00000578143 78 ntBASIC-0.75□□□□□ -2.53
LMX1AQ8TE12 MIR3121-201ENST00000579680 77 ntBASIC-0.75□□□□□ -2.53
LMX1AQ8TE12 MIR3163-201ENST00000581592 73 ntBASIC-0.75□□□□□ -2.53
LMX1AQ8TE12 RNU6-90P-201ENST00000606352 106 ntBASIC-0.75□□□□□ -2.53
LMX1AQ8TE12 AL512310.12-203ENST00000640543 90 ntBASIC-0.75□□□□□ -2.53
LMX1AQ8TE12 MIR409-201ENST00000362237 79 ntBASIC-0.76□□□□□ -2.53
LMX1AQ8TE12 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.76□□□□□ -2.53
LMX1AQ8TE12 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.76□□□□□ -2.53
LMX1AQ8TE12 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.76□□□□□ -2.53
LMX1AQ8TE12 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.76□□□□□ -2.53
LMX1AQ8TE12 SNORA81.3-201ENST00000517283 198 ntBASIC-0.76□□□□□ -2.53
LMX1AQ8TE12 AC140658.3-201ENST00000567603 271 ntBASIC-0.76□□□□□ -2.53
LMX1AQ8TE12 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.76□□□□□ -2.53
LMX1AQ8TE12 SNORD50.2-201ENST00000365465 70 ntBASIC-0.77□□□□□ -2.53
LMX1AQ8TE12 RNU6-746P-201ENST00000384112 109 ntBASIC-0.77□□□□□ -2.53
LMX1AQ8TE12 RN7SKP19-201ENST00000516016 252 ntBASIC-0.77□□□□□ -2.53
LMX1AQ8TE12 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.77□□□□□ -2.53
LMX1AQ8TE12 AL442128.1-201ENST00000615151 90 ntBASIC-0.77□□□□□ -2.53
LMX1AQ8TE12 AL445584.3-201ENST00000617173 78 ntBASIC-0.77□□□□□ -2.53
LMX1AQ8TE12 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.78□□□□□ -2.53
LMX1AQ8TE12 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms