Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RNU6-1110P-201ENST00000516462 101 ntBASIC1.57□□□□□ -2.16
NPAS4Q8IUM7 RNA5SP404-201ENST00000517118 132 ntBASIC1.57□□□□□ -2.16
NPAS4Q8IUM7 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.57□□□□□ -2.16
NPAS4Q8IUM7 MIR1297-201ENST00000637311 77 ntBASIC1.57□□□□□ -2.16
NPAS4Q8IUM7 Y_RNA.355-201ENST00000365462 98 ntBASIC1.56□□□□□ -2.16
NPAS4Q8IUM7 Y_RNA.371-201ENST00000365591 113 ntBASIC1.56□□□□□ -2.16
NPAS4Q8IUM7 RNU1-119P-201ENST00000391122 165 ntBASIC1.56□□□□□ -2.16
NPAS4Q8IUM7 RNU6-1052P-201ENST00000411398 104 ntBASIC1.56□□□□□ -2.16
NPAS4Q8IUM7 RNU6-719P-201ENST00000516671 104 ntBASIC1.56□□□□□ -2.16
NPAS4Q8IUM7 AC008608.1-201ENST00000603910 127 ntBASIC1.56□□□□□ -2.16
NPAS4Q8IUM7 MIR6504-201ENST00000613520 61 ntBASIC1.56□□□□□ -2.16
NPAS4Q8IUM7 RNU5F-1-201ENST00000362507 117 ntBASIC1.55□□□□□ -2.16
NPAS4Q8IUM7 RNU6-330P-201ENST00000363015 107 ntBASIC1.55□□□□□ -2.16
NPAS4Q8IUM7 Y_RNA.596-201ENST00000410462 109 ntBASIC1.55□□□□□ -2.16
NPAS4Q8IUM7 U7.7-201ENST00000459276 60 ntBASIC1.55□□□□□ -2.16
NPAS4Q8IUM7 RNU6-687P-201ENST00000516443 89 ntBASIC1.55□□□□□ -2.16
NPAS4Q8IUM7 Y_RNA.681-201ENST00000516445 113 ntBASIC1.55□□□□□ -2.16
NPAS4Q8IUM7 MTRNR2L2-201ENST00000604882 87 ntBASIC1.55□□□□□ -2.16
NPAS4Q8IUM7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.55□□□□□ -2.16
NPAS4Q8IUM7 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
NPAS4Q8IUM7 Y_RNA.118-201ENST00000363300 101 ntBASIC1.54□□□□□ -2.16
NPAS4Q8IUM7 MIR520F-201ENST00000384824 87 ntBASIC1.54□□□□□ -2.16
NPAS4Q8IUM7 RNU1-123P-201ENST00000458950 160 ntBASIC1.54□□□□□ -2.16
NPAS4Q8IUM7 MIR4804-201ENST00000581683 73 ntBASIC1.54□□□□□ -2.16
NPAS4Q8IUM7 Y_RNA.224-201ENST00000364308 111 ntBASIC1.53□□□□□ -2.16
NPAS4Q8IUM7 RNY4P3-201ENST00000365254 95 ntBASIC1.53□□□□□ -2.16
NPAS4Q8IUM7 RNU7-56P-201ENST00000458744 62 ntBASIC1.53□□□□□ -2.16
NPAS4Q8IUM7 RNU6-1265P-201ENST00000516342 103 ntBASIC1.53□□□□□ -2.16
NPAS4Q8IUM7 SNORD89-201ENST00000390981 114 ntBASIC1.52□□□□□ -2.17
NPAS4Q8IUM7 AC025627.3-201ENST00000582078 182 ntBASIC1.52□□□□□ -2.17
NPAS4Q8IUM7 MIR6078-201ENST00000611069 100 ntBASIC1.52□□□□□ -2.17
NPAS4Q8IUM7 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
NPAS4Q8IUM7 RNU6-340P-201ENST00000364005 107 ntBASIC1.51□□□□□ -2.17
NPAS4Q8IUM7 RNU6-935P-201ENST00000410371 100 ntBASIC1.51□□□□□ -2.17
NPAS4Q8IUM7 SNORA8.1-201ENST00000384250 140 ntBASIC1.5□□□□□ -2.17
NPAS4Q8IUM7 RNU6-154P-201ENST00000384306 106 ntBASIC1.5□□□□□ -2.17
NPAS4Q8IUM7 MIR150-201ENST00000385048 84 ntBASIC1.5□□□□□ -2.17
NPAS4Q8IUM7 MIR451A-201ENST00000385059 72 ntBASIC1.5□□□□□ -2.17
NPAS4Q8IUM7 SNORD124-201ENST00000459577 104 ntBASIC1.5□□□□□ -2.17
NPAS4Q8IUM7 RNU6-871P-201ENST00000516122 100 ntBASIC1.5□□□□□ -2.17
NPAS4Q8IUM7 RNA5SP102-201ENST00000516865 106 ntBASIC1.5□□□□□ -2.17
NPAS4Q8IUM7 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.5□□□□□ -2.17
NPAS4Q8IUM7 Y_RNA.36-201ENST00000362602 112 ntBASIC1.49□□□□□ -2.17
NPAS4Q8IUM7 RNU6-587P-201ENST00000391282 106 ntBASIC1.49□□□□□ -2.17
NPAS4Q8IUM7 AC244505.6-201ENST00000452829 130 ntBASIC1.49□□□□□ -2.17
NPAS4Q8IUM7 RNU6-634P-201ENST00000459134 106 ntBASIC1.49□□□□□ -2.17
NPAS4Q8IUM7 RNU6-287P-201ENST00000516230 98 ntBASIC1.49□□□□□ -2.17
NPAS4Q8IUM7 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.49□□□□□ -2.17
NPAS4Q8IUM7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.49□□□□□ -2.17
NPAS4Q8IUM7 SNORA24B-201ENST00000384176 131 ntBASIC1.48□□□□□ -2.17
NPAS4Q8IUM7 RNU6-1241P-201ENST00000384536 107 ntBASIC1.48□□□□□ -2.17
NPAS4Q8IUM7 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
NPAS4Q8IUM7 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.48□□□□□ -2.17
NPAS4Q8IUM7 RNU6-539P-201ENST00000516665 103 ntBASIC1.48□□□□□ -2.17
NPAS4Q8IUM7 SNORA31.14-201ENST00000516728 116 ntBASIC1.48□□□□□ -2.17
NPAS4Q8IUM7 RMST_2.1-201ENST00000617263 136 ntBASIC1.48□□□□□ -2.17
NPAS4Q8IUM7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
NPAS4Q8IUM7 Y_RNA.32-201ENST00000362589 110 ntBASIC1.47□□□□□ -2.17
NPAS4Q8IUM7 RNU6-824P-201ENST00000363724 104 ntBASIC1.47□□□□□ -2.17
NPAS4Q8IUM7 RNU6-590P-201ENST00000365039 107 ntBASIC1.47□□□□□ -2.17
NPAS4Q8IUM7 RNA5SP363-201ENST00000365072 115 ntBASIC1.47□□□□□ -2.17
NPAS4Q8IUM7 MIR320A-201ENST00000385302 82 ntBASIC1.47□□□□□ -2.17
NPAS4Q8IUM7 SNORD105-201ENST00000386910 85 ntBASIC1.47□□□□□ -2.17
NPAS4Q8IUM7 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
NPAS4Q8IUM7 RNU6-955P-201ENST00000410497 104 ntBASIC1.47□□□□□ -2.17
NPAS4Q8IUM7 MIR2113-201ENST00000459007 91 ntBASIC1.47□□□□□ -2.17
NPAS4Q8IUM7 AC097510.1-201ENST00000510945 133 ntBASIC1.47□□□□□ -2.17
NPAS4Q8IUM7 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
NPAS4Q8IUM7 uc_338.16-201ENST00000621804 95 ntBASIC1.46□□□□□ -2.18
NPAS4Q8IUM7 SNORD115-31-201ENST00000365318 82 ntBASIC1.45□□□□□ -2.18
NPAS4Q8IUM7 RNU6-540P-201ENST00000384622 101 ntBASIC1.45□□□□□ -2.18
NPAS4Q8IUM7 MIR154-201ENST00000385243 84 ntBASIC1.45□□□□□ -2.18
NPAS4Q8IUM7 Y_RNA.606-201ENST00000410579 103 ntBASIC1.45□□□□□ -2.18
NPAS4Q8IUM7 snoU13.18-201ENST00000459483 104 ntBASIC1.45□□□□□ -2.18
NPAS4Q8IUM7 RNU6-1057P-201ENST00000517162 102 ntBASIC1.45□□□□□ -2.18
NPAS4Q8IUM7 MIR4452-201ENST00000583004 71 ntBASIC1.45□□□□□ -2.18
NPAS4Q8IUM7 MIR3660-201ENST00000584845 100 ntBASIC1.45□□□□□ -2.18
NPAS4Q8IUM7 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.45□□□□□ -2.18
NPAS4Q8IUM7 RNU6-681P-201ENST00000364012 104 ntBASIC1.44□□□□□ -2.18
NPAS4Q8IUM7 RNU2-59P-201ENST00000410482 191 ntBASIC1.44□□□□□ -2.18
NPAS4Q8IUM7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.44□□□□□ -2.18
NPAS4Q8IUM7 MIR4661-201ENST00000582720 75 ntBASIC1.44□□□□□ -2.18
NPAS4Q8IUM7 SNORD115-24-201ENST00000363528 82 ntBASIC1.43□□□□□ -2.18
NPAS4Q8IUM7 MIR489-201ENST00000384923 84 ntBASIC1.43□□□□□ -2.18
NPAS4Q8IUM7 SNORA40.6-201ENST00000391153 128 ntBASIC1.43□□□□□ -2.18
NPAS4Q8IUM7 SNORD30.1-201ENST00000391309 70 ntBASIC1.43□□□□□ -2.18
NPAS4Q8IUM7 RNA5SP255-201ENST00000516370 107 ntBASIC1.43□□□□□ -2.18
NPAS4Q8IUM7 MIR3675-201ENST00000583661 73 ntBASIC1.43□□□□□ -2.18
NPAS4Q8IUM7 U6.81-201ENST00000612550 106 ntBASIC1.43□□□□□ -2.18
NPAS4Q8IUM7 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.43□□□□□ -2.18
NPAS4Q8IUM7 RNU6-649P-201ENST00000384463 107 ntBASIC1.42□□□□□ -2.18
NPAS4Q8IUM7 RNU7-13P-201ENST00000516413 62 ntBASIC1.42□□□□□ -2.18
NPAS4Q8IUM7 RNU7-161P-201ENST00000517289 62 ntBASIC1.42□□□□□ -2.18
NPAS4Q8IUM7 RNU6-1177P-201ENST00000391058 104 ntBASIC1.41□□□□□ -2.18
NPAS4Q8IUM7 MIR548AG2-201ENST00000581228 64 ntBASIC1.41□□□□□ -2.18
NPAS4Q8IUM7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.41□□□□□ -2.18
NPAS4Q8IUM7 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
NPAS4Q8IUM7 RNA5SP403-201ENST00000363598 108 ntBASIC1.4□□□□□ -2.19
NPAS4Q8IUM7 Y_RNA.174-201ENST00000363781 105 ntBASIC1.4□□□□□ -2.19
NPAS4Q8IUM7 Y_RNA.258-201ENST00000364613 105 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms