Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 RNA5SP425-201ENST00000410336 112 ntBASIC2.15□□□□□ -2.07
LAPTM4BQ86VI4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.15□□□□□ -2.07
LAPTM4BQ86VI4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
LAPTM4BQ86VI4 RN7SKP223-201ENST00000410582 62 ntBASIC2.14□□□□□ -2.07
LAPTM4BQ86VI4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.14□□□□□ -2.07
LAPTM4BQ86VI4 RNU4ATAC4P-201ENST00000516307 126 ntBASIC2.14□□□□□ -2.07
LAPTM4BQ86VI4 RNA5SP82-201ENST00000516707 92 ntBASIC2.14□□□□□ -2.07
LAPTM4BQ86VI4 MIR6715A-201ENST00000615929 79 ntBASIC2.14□□□□□ -2.07
LAPTM4BQ86VI4 Y_RNA.250-201ENST00000364542 110 ntBASIC2.13□□□□□ -2.07
LAPTM4BQ86VI4 SNORA80D-201ENST00000384488 135 ntBASIC2.13□□□□□ -2.07
LAPTM4BQ86VI4 RNU6-520P-201ENST00000384717 104 ntBASIC2.13□□□□□ -2.07
LAPTM4BQ86VI4 RNU6-910P-201ENST00000390844 107 ntBASIC2.13□□□□□ -2.07
LAPTM4BQ86VI4 MIR1261-201ENST00000408659 82 ntBASIC2.13□□□□□ -2.07
LAPTM4BQ86VI4 AL356320.1-201ENST00000429616 163 ntBASIC2.13□□□□□ -2.07
LAPTM4BQ86VI4 RNU7-90P-201ENST00000459216 62 ntBASIC2.13□□□□□ -2.07
LAPTM4BQ86VI4 SNORA44.1-201ENST00000517031 108 ntBASIC2.13□□□□□ -2.07
LAPTM4BQ86VI4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.13□□□□□ -2.07
LAPTM4BQ86VI4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LAPTM4BQ86VI4 RNU6-698P-201ENST00000363523 107 ntBASIC2.12□□□□□ -2.07
LAPTM4BQ86VI4 SNORA67.1-201ENST00000364749 141 ntBASIC2.12□□□□□ -2.07
LAPTM4BQ86VI4 RNU6-34P-201ENST00000364874 107 ntBASIC2.12□□□□□ -2.07
LAPTM4BQ86VI4 MIR221-201ENST00000385135 110 ntBASIC2.12□□□□□ -2.07
LAPTM4BQ86VI4 RNU5B-6P-201ENST00000516765 68 ntBASIC2.12□□□□□ -2.07
LAPTM4BQ86VI4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.12□□□□□ -2.07
LAPTM4BQ86VI4 MIR6766-201ENST00000622641 72 ntBASIC2.12□□□□□ -2.07
LAPTM4BQ86VI4 SNORA7.1-201ENST00000363750 139 ntBASIC2.11□□□□□ -2.07
LAPTM4BQ86VI4 SNORD114-4-201ENST00000363962 75 ntBASIC2.11□□□□□ -2.07
LAPTM4BQ86VI4 AC244669.1-204ENST00000621564 178 ntBASIC2.11□□□□□ -2.07
LAPTM4BQ86VI4 AC104435.1-201ENST00000483483 166 ntBASIC2.1□□□□□ -2.07
LAPTM4BQ86VI4 AC021146.9-201ENST00000512503 156 ntBASIC2.1□□□□□ -2.07
LAPTM4BQ86VI4 RNU7-174P-201ENST00000516248 59 ntBASIC2.1□□□□□ -2.07
LAPTM4BQ86VI4 MIR1273D-201ENST00000577266 86 ntBASIC2.1□□□□□ -2.07
LAPTM4BQ86VI4 MIR4648-201ENST00000580107 72 ntBASIC2.1□□□□□ -2.07
LAPTM4BQ86VI4 MIR6895-201ENST00000613497 78 ntBASIC2.1□□□□□ -2.07
LAPTM4BQ86VI4 U2.7-201ENST00000619197 100 ntBASIC2.1□□□□□ -2.07
LAPTM4BQ86VI4 uc_338.10-201ENST00000621872 182 ntBASIC2.1□□□□□ -2.07
LAPTM4BQ86VI4 MIR6873-201ENST00000622788 63 ntBASIC2.1□□□□□ -2.07
LAPTM4BQ86VI4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
LAPTM4BQ86VI4 RMST_2.1-201ENST00000617263 136 ntBASIC2.09□□□□□ -2.07
LAPTM4BQ86VI4 U4.4-201ENST00000620626 117 ntBASIC2.09□□□□□ -2.07
LAPTM4BQ86VI4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LAPTM4BQ86VI4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.08□□□□□ -2.08
LAPTM4BQ86VI4 SNORA64-201ENST00000384674 134 ntBASIC2.08□□□□□ -2.08
LAPTM4BQ86VI4 SNORD41.1-201ENST00000391000 69 ntBASIC2.08□□□□□ -2.08
LAPTM4BQ86VI4 RNU6-469P-201ENST00000516253 101 ntBASIC2.08□□□□□ -2.08
LAPTM4BQ86VI4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.08□□□□□ -2.08
LAPTM4BQ86VI4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2.08□□□□□ -2.08
LAPTM4BQ86VI4 RNU1-141P-201ENST00000364623 158 ntBASIC2.07□□□□□ -2.08
LAPTM4BQ86VI4 RNA5SP37-201ENST00000365420 130 ntBASIC2.07□□□□□ -2.08
LAPTM4BQ86VI4 MIR1827-201ENST00000408549 66 ntBASIC2.07□□□□□ -2.08
LAPTM4BQ86VI4 AC079804.2-201ENST00000490376 200 ntBASIC2.07□□□□□ -2.08
LAPTM4BQ86VI4 AC002350.1-201ENST00000490759 375 ntBASIC2.07□□□□□ -2.08
LAPTM4BQ86VI4 MIR4639-201ENST00000584938 69 ntBASIC2.07□□□□□ -2.08
LAPTM4BQ86VI4 RNU6-716P-201ENST00000365621 103 ntBASIC2.06□□□□□ -2.08
LAPTM4BQ86VI4 SNORD28-201ENST00000384706 75 ntBASIC2.06□□□□□ -2.08
LAPTM4BQ86VI4 MIR4781-201ENST00000585250 76 ntBASIC2.06□□□□□ -2.08
LAPTM4BQ86VI4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.06□□□□□ -2.08
LAPTM4BQ86VI4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.06□□□□□ -2.08
LAPTM4BQ86VI4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LAPTM4BQ86VI4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LAPTM4BQ86VI4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LAPTM4BQ86VI4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.05□□□□□ -2.08
LAPTM4BQ86VI4 SNORD79.1-201ENST00000516069 84 ntBASIC2.05□□□□□ -2.08
LAPTM4BQ86VI4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC2.05□□□□□ -2.08
LAPTM4BQ86VI4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LAPTM4BQ86VI4 SNORA33.1-201ENST00000364957 130 ntBASIC2.04□□□□□ -2.08
LAPTM4BQ86VI4 RNU7-119P-201ENST00000459279 63 ntBASIC2.04□□□□□ -2.08
LAPTM4BQ86VI4 snoU13.15-201ENST00000459407 104 ntBASIC2.04□□□□□ -2.08
LAPTM4BQ86VI4 RNA5SP200-201ENST00000516360 103 ntBASIC2.04□□□□□ -2.08
LAPTM4BQ86VI4 RNU6-135P-201ENST00000516769 101 ntBASIC2.04□□□□□ -2.08
LAPTM4BQ86VI4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LAPTM4BQ86VI4 Y_RNA.125-201ENST00000363371 111 ntBASIC2.03□□□□□ -2.08
LAPTM4BQ86VI4 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC2.03□□□□□ -2.08
LAPTM4BQ86VI4 SNORA15B-2-201ENST00000384058 135 ntBASIC2.02□□□□□ -2.09
LAPTM4BQ86VI4 SNORA15B-1-201ENST00000384334 135 ntBASIC2.02□□□□□ -2.09
LAPTM4BQ86VI4 snoU13.26-201ENST00000459452 105 ntBASIC2.02□□□□□ -2.09
LAPTM4BQ86VI4 RNU6-548P-201ENST00000517083 115 ntBASIC2.02□□□□□ -2.09
LAPTM4BQ86VI4 MIR219B-201ENST00000637023 88 ntBASIC2.02□□□□□ -2.09
LAPTM4BQ86VI4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
LAPTM4BQ86VI4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LAPTM4BQ86VI4 RNU6-726P-201ENST00000364680 107 ntBASIC2.01□□□□□ -2.09
LAPTM4BQ86VI4 SNORA41B-201ENST00000384785 128 ntBASIC2.01□□□□□ -2.09
LAPTM4BQ86VI4 MIR17-201ENST00000385012 84 ntBASIC2.01□□□□□ -2.09
LAPTM4BQ86VI4 MIR5694-201ENST00000581190 76 ntBASIC2.01□□□□□ -2.09
LAPTM4BQ86VI4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC2.01□□□□□ -2.09
LAPTM4BQ86VI4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
LAPTM4BQ86VI4 RNU6-269P-201ENST00000391077 97 ntBASIC2□□□□□ -2.09
LAPTM4BQ86VI4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2□□□□□ -2.09
LAPTM4BQ86VI4 HMGN2P19-201ENST00000425149 265 ntBASIC2□□□□□ -2.09
LAPTM4BQ86VI4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2□□□□□ -2.09
LAPTM4BQ86VI4 MIR6132-201ENST00000622083 109 ntBASIC2□□□□□ -2.09
LAPTM4BQ86VI4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.99□□□□□ -2.09
LAPTM4BQ86VI4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
LAPTM4BQ86VI4 Y_RNA.246-201ENST00000364495 108 ntBASIC1.99□□□□□ -2.09
LAPTM4BQ86VI4 Y_RNA.325-201ENST00000365171 122 ntBASIC1.99□□□□□ -2.09
LAPTM4BQ86VI4 MIR758-201ENST00000390227 88 ntBASIC1.99□□□□□ -2.09
LAPTM4BQ86VI4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
LAPTM4BQ86VI4 RNU1-78P-201ENST00000391248 165 ntBASIC1.99□□□□□ -2.09
LAPTM4BQ86VI4 RNA5SP484-201ENST00000458857 111 ntBASIC1.99□□□□□ -2.09
LAPTM4BQ86VI4 AC015712.3-201ENST00000559380 164 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms