Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 RNU6-1057P-201ENST00000517162 102 ntBASIC1.02□□□□□ -2.25
E4F1Q66K89 SNORD115-44-201ENST00000365391 82 ntBASIC1.01□□□□□ -2.25
E4F1Q66K89 RNU6-1124P-201ENST00000384169 107 ntBASIC1.01□□□□□ -2.25
E4F1Q66K89 AC140658.3-201ENST00000567603 271 ntBASIC1.01□□□□□ -2.25
E4F1Q66K89 MIR4666B-201ENST00000578142 81 ntBASIC1.01□□□□□ -2.25
E4F1Q66K89 MTRNR2L2-201ENST00000604882 87 ntBASIC1.01□□□□□ -2.25
E4F1Q66K89 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.01□□□□□ -2.25
E4F1Q66K89 RNU6-652P-201ENST00000365488 107 ntBASIC1□□□□□ -2.25
E4F1Q66K89 RNU6-716P-201ENST00000365621 103 ntBASIC1□□□□□ -2.25
E4F1Q66K89 SNORA36.2-201ENST00000384004 127 ntBASIC1□□□□□ -2.25
E4F1Q66K89 RNU6-935P-201ENST00000410371 100 ntBASIC1□□□□□ -2.25
E4F1Q66K89 Y_RNA.685-201ENST00000516532 108 ntBASIC1□□□□□ -2.25
E4F1Q66K89 RNA5SP47-201ENST00000517230 109 ntBASIC1□□□□□ -2.25
E4F1Q66K89 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1□□□□□ -2.25
E4F1Q66K89 DLEU2_3.1-201ENST00000620005 73 ntBASIC1□□□□□ -2.25
E4F1Q66K89 MIR3202-2-201ENST00000635980 79 ntBASIC1□□□□□ -2.25
E4F1Q66K89 RNU6-228P-201ENST00000362700 106 ntBASIC0.99□□□□□ -2.25
E4F1Q66K89 RNU6-392P-201ENST00000364926 101 ntBASIC0.99□□□□□ -2.25
E4F1Q66K89 Y_RNA.313-201ENST00000365095 103 ntBASIC0.99□□□□□ -2.25
E4F1Q66K89 FGF7P7-201ENST00000514120 227 ntBASIC0.99□□□□□ -2.25
E4F1Q66K89 ACA64.5-201ENST00000516207 127 ntBASIC0.99□□□□□ -2.25
E4F1Q66K89 MIR3920-201ENST00000581751 86 ntBASIC0.99□□□□□ -2.25
E4F1Q66K89 RNU4-45P-201ENST00000365469 141 ntBASIC0.98□□□□□ -2.25
E4F1Q66K89 MIR451A-201ENST00000385059 72 ntBASIC0.98□□□□□ -2.25
E4F1Q66K89 RNU6-1275P-201ENST00000391087 107 ntBASIC0.98□□□□□ -2.25
E4F1Q66K89 SNORD90-201ENST00000391145 111 ntBASIC0.98□□□□□ -2.25
E4F1Q66K89 MIR2113-201ENST00000459007 91 ntBASIC0.98□□□□□ -2.25
E4F1Q66K89 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.98□□□□□ -2.25
E4F1Q66K89 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.98□□□□□ -2.25
E4F1Q66K89 Y_RNA.316-201ENST00000365118 111 ntBASIC0.97□□□□□ -2.25
E4F1Q66K89 RNU6-1126P-201ENST00000384002 107 ntBASIC0.97□□□□□ -2.25
E4F1Q66K89 MIR608-201ENST00000384820 100 ntBASIC0.97□□□□□ -2.25
E4F1Q66K89 MIR1255A-201ENST00000408338 113 ntBASIC0.97□□□□□ -2.25
E4F1Q66K89 RNU6-321P-201ENST00000410912 106 ntBASIC0.97□□□□□ -2.25
E4F1Q66K89 RNU6-1052P-201ENST00000411398 104 ntBASIC0.97□□□□□ -2.25
E4F1Q66K89 RNU6-719P-201ENST00000516671 104 ntBASIC0.97□□□□□ -2.25
E4F1Q66K89 SCARNA16.5-201ENST00000517114 183 ntBASIC0.97□□□□□ -2.25
E4F1Q66K89 RNU6-1051P-201ENST00000365471 102 ntBASIC0.96□□□□□ -2.26
E4F1Q66K89 RNY1P8-201ENST00000383970 114 ntBASIC0.96□□□□□ -2.26
E4F1Q66K89 Y_RNA.164-201ENST00000363709 102 ntBASIC0.95□□□□□ -2.26
E4F1Q66K89 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.95□□□□□ -2.26
E4F1Q66K89 AL450471.1-201ENST00000447509 127 ntBASIC0.95□□□□□ -2.26
E4F1Q66K89 RNA5SP227-201ENST00000516184 113 ntBASIC0.95□□□□□ -2.26
E4F1Q66K89 RNA5SP395-201ENST00000516567 118 ntBASIC0.95□□□□□ -2.26
E4F1Q66K89 RNA5SP94-201ENST00000516917 108 ntBASIC0.95□□□□□ -2.26
E4F1Q66K89 MIR548AG2-201ENST00000581228 64 ntBASIC0.95□□□□□ -2.26
E4F1Q66K89 MIR3140-201ENST00000583685 90 ntBASIC0.95□□□□□ -2.26
E4F1Q66K89 MIR6767-201ENST00000637302 66 ntBASIC0.95□□□□□ -2.26
E4F1Q66K89 RNY4P3-201ENST00000365254 95 ntBASIC0.94□□□□□ -2.26
E4F1Q66K89 RNU6-1108P-201ENST00000516308 104 ntBASIC0.94□□□□□ -2.26
E4F1Q66K89 MIR337-201ENST00000362281 93 ntBASIC0.93□□□□□ -2.26
E4F1Q66K89 RNU5F-1-201ENST00000362507 117 ntBASIC0.93□□□□□ -2.26
E4F1Q66K89 RNU6-161P-201ENST00000363051 106 ntBASIC0.93□□□□□ -2.26
E4F1Q66K89 RNU6-624P-201ENST00000363411 107 ntBASIC0.93□□□□□ -2.26
E4F1Q66K89 RNU6-726P-201ENST00000364680 107 ntBASIC0.93□□□□□ -2.26
E4F1Q66K89 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.93□□□□□ -2.26
E4F1Q66K89 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
E4F1Q66K89 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.93□□□□□ -2.26
E4F1Q66K89 MIR3973-201ENST00000579824 107 ntBASIC0.93□□□□□ -2.26
E4F1Q66K89 SNORA63.2-201ENST00000362603 126 ntBASIC0.92□□□□□ -2.26
E4F1Q66K89 SNORA36.1-201ENST00000363424 132 ntBASIC0.92□□□□□ -2.26
E4F1Q66K89 SNORD114-27-201ENST00000363766 70 ntBASIC0.92□□□□□ -2.26
E4F1Q66K89 MIR532-201ENST00000385025 91 ntBASIC0.92□□□□□ -2.26
E4F1Q66K89 MIR617-201ENST00000385030 97 ntBASIC0.92□□□□□ -2.26
E4F1Q66K89 RNU6-129P-201ENST00000391022 107 ntBASIC0.92□□□□□ -2.26
E4F1Q66K89 RNU6-351P-201ENST00000516097 100 ntBASIC0.92□□□□□ -2.26
E4F1Q66K89 MIR4698-201ENST00000577795 80 ntBASIC0.92□□□□□ -2.26
E4F1Q66K89 SNORD114-2-201ENST00000363953 78 ntBASIC0.91□□□□□ -2.26
E4F1Q66K89 SNORD41.1-201ENST00000391000 69 ntBASIC0.91□□□□□ -2.26
E4F1Q66K89 RNA5SP225-201ENST00000410874 135 ntBASIC0.91□□□□□ -2.26
E4F1Q66K89 RNU7-74P-201ENST00000459104 62 ntBASIC0.91□□□□□ -2.26
E4F1Q66K89 PSMC1P5-201ENST00000512850 177 ntBASIC0.91□□□□□ -2.26
E4F1Q66K89 RNA5SP268-201ENST00000516828 124 ntBASIC0.91□□□□□ -2.26
E4F1Q66K89 SNORA25.9-201ENST00000365087 128 ntBASIC0.9□□□□□ -2.27
E4F1Q66K89 MIR519E-201ENST00000385075 84 ntBASIC0.9□□□□□ -2.27
E4F1Q66K89 MIR146A-201ENST00000385201 99 ntBASIC0.9□□□□□ -2.27
E4F1Q66K89 MIR140-201ENST00000385282 100 ntBASIC0.9□□□□□ -2.27
E4F1Q66K89 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.9□□□□□ -2.27
E4F1Q66K89 AC211469.2-201ENST00000605461 205 ntBASIC0.9□□□□□ -2.27
E4F1Q66K89 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
E4F1Q66K89 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
E4F1Q66K89 MIR373-201ENST00000362273 69 ntBASIC0.89□□□□□ -2.27
E4F1Q66K89 RNU6-208P-201ENST00000362431 107 ntBASIC0.89□□□□□ -2.27
E4F1Q66K89 SNORD77.2-201ENST00000391045 68 ntBASIC0.89□□□□□ -2.27
E4F1Q66K89 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.89□□□□□ -2.27
E4F1Q66K89 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.89□□□□□ -2.27
E4F1Q66K89 MIR6828-201ENST00000636181 60 ntBASIC0.89□□□□□ -2.27
E4F1Q66K89 Y_RNA.94-201ENST00000363068 106 ntBASIC0.88□□□□□ -2.27
E4F1Q66K89 RNU6-478P-201ENST00000363904 110 ntBASIC0.88□□□□□ -2.27
E4F1Q66K89 RNU6-279P-201ENST00000391297 101 ntBASIC0.88□□□□□ -2.27
E4F1Q66K89 snoU13.17-201ENST00000458802 104 ntBASIC0.88□□□□□ -2.27
E4F1Q66K89 RNU6-638P-201ENST00000516582 104 ntBASIC0.88□□□□□ -2.27
E4F1Q66K89 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
E4F1Q66K89 RNU6-269P-201ENST00000391077 97 ntBASIC0.87□□□□□ -2.27
E4F1Q66K89 MIR7107-201ENST00000611489 80 ntBASIC0.87□□□□□ -2.27
E4F1Q66K89 AC092634.7-201ENST00000621022 103 ntBASIC0.87□□□□□ -2.27
E4F1Q66K89 SNORA8.2-201ENST00000384372 139 ntBASIC0.86□□□□□ -2.27
E4F1Q66K89 U3.27-201ENST00000391237 200 ntBASIC0.86□□□□□ -2.27
E4F1Q66K89 RNU6-557P-201ENST00000516842 110 ntBASIC0.86□□□□□ -2.27
E4F1Q66K89 MIR4712-201ENST00000583750 82 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms