Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 RNU6-535P-201ENST00000384722 107 ntBASIC1.48□□□□□ -2.17
EFEMP1Q12805 MIR499A-201ENST00000384903 122 ntBASIC1.48□□□□□ -2.17
EFEMP1Q12805 MIR30A-201ENST00000385092 71 ntBASIC1.48□□□□□ -2.17
EFEMP1Q12805 MIR125B2-201ENST00000385128 89 ntBASIC1.48□□□□□ -2.17
EFEMP1Q12805 TRMT112P2-201ENST00000512910 132 ntBASIC1.48□□□□□ -2.17
EFEMP1Q12805 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
EFEMP1Q12805 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
EFEMP1Q12805 SNORD33-201ENST00000362761 85 ntBASIC1.47□□□□□ -2.17
EFEMP1Q12805 Y_RNA.330-201ENST00000365230 109 ntBASIC1.47□□□□□ -2.17
EFEMP1Q12805 U3.27-201ENST00000391237 200 ntBASIC1.47□□□□□ -2.17
EFEMP1Q12805 MTND4LP1-201ENST00000446263 157 ntBASIC1.47□□□□□ -2.17
EFEMP1Q12805 MIR8070-201ENST00000616510 88 ntBASIC1.47□□□□□ -2.17
EFEMP1Q12805 AC092634.7-201ENST00000621022 103 ntBASIC1.47□□□□□ -2.17
EFEMP1Q12805 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.47□□□□□ -2.17
EFEMP1Q12805 SNORA7.1-201ENST00000363750 139 ntBASIC1.46□□□□□ -2.18
EFEMP1Q12805 MIR203A-201ENST00000384836 110 ntBASIC1.46□□□□□ -2.18
EFEMP1Q12805 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.46□□□□□ -2.18
EFEMP1Q12805 AC019176.1-201ENST00000518519 225 ntBASIC1.46□□□□□ -2.18
EFEMP1Q12805 NAMPTP3-201ENST00000569273 224 ntBASIC1.46□□□□□ -2.18
EFEMP1Q12805 MIR4421-201ENST00000578133 69 ntBASIC1.46□□□□□ -2.18
EFEMP1Q12805 RNA5SP192-201ENST00000364404 120 ntBASIC1.45□□□□□ -2.18
EFEMP1Q12805 SNORD75.2-201ENST00000408784 58 ntBASIC1.45□□□□□ -2.18
EFEMP1Q12805 AC008834.1-201ENST00000511612 175 ntBASIC1.45□□□□□ -2.18
EFEMP1Q12805 AC008608.1-201ENST00000603910 127 ntBASIC1.45□□□□□ -2.18
EFEMP1Q12805 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
EFEMP1Q12805 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.44□□□□□ -2.18
EFEMP1Q12805 RNU6-369P-201ENST00000362515 102 ntBASIC1.44□□□□□ -2.18
EFEMP1Q12805 SNORD1A-201ENST00000364968 72 ntBASIC1.44□□□□□ -2.18
EFEMP1Q12805 RNU6-1039P-201ENST00000383931 107 ntBASIC1.44□□□□□ -2.18
EFEMP1Q12805 MIR934-201ENST00000401241 83 ntBASIC1.44□□□□□ -2.18
EFEMP1Q12805 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.44□□□□□ -2.18
EFEMP1Q12805 snoU13.9-201ENST00000458927 103 ntBASIC1.44□□□□□ -2.18
EFEMP1Q12805 RNU6-542P-201ENST00000516405 103 ntBASIC1.44□□□□□ -2.18
EFEMP1Q12805 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.44□□□□□ -2.18
EFEMP1Q12805 MIR466-201ENST00000580653 84 ntBASIC1.44□□□□□ -2.18
EFEMP1Q12805 MIR3920-201ENST00000581751 86 ntBASIC1.44□□□□□ -2.18
EFEMP1Q12805 MIR6509-201ENST00000614603 85 ntBASIC1.44□□□□□ -2.18
EFEMP1Q12805 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.44□□□□□ -2.18
EFEMP1Q12805 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
EFEMP1Q12805 SNORA25.5-201ENST00000363782 126 ntBASIC1.43□□□□□ -2.18
EFEMP1Q12805 SNORD113.3-201ENST00000364630 78 ntBASIC1.43□□□□□ -2.18
EFEMP1Q12805 SNORD115-44-201ENST00000365391 82 ntBASIC1.43□□□□□ -2.18
EFEMP1Q12805 Y_RNA.375-201ENST00000365625 101 ntBASIC1.43□□□□□ -2.18
EFEMP1Q12805 RNU6-364P-201ENST00000384387 107 ntBASIC1.43□□□□□ -2.18
EFEMP1Q12805 AC244505.6-201ENST00000452829 130 ntBASIC1.43□□□□□ -2.18
EFEMP1Q12805 RNU7-40P-201ENST00000516397 64 ntBASIC1.43□□□□□ -2.18
EFEMP1Q12805 RNU7-13P-201ENST00000516413 62 ntBASIC1.43□□□□□ -2.18
EFEMP1Q12805 AC036111.3-201ENST00000526389 112 ntBASIC1.43□□□□□ -2.18
EFEMP1Q12805 MIR3664-201ENST00000579074 99 ntBASIC1.43□□□□□ -2.18
EFEMP1Q12805 MIR4676-201ENST00000583078 72 ntBASIC1.43□□□□□ -2.18
EFEMP1Q12805 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
EFEMP1Q12805 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.43□□□□□ -2.18
EFEMP1Q12805 MIR302D-201ENST00000362275 68 ntBASIC1.42□□□□□ -2.18
EFEMP1Q12805 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.42□□□□□ -2.18
EFEMP1Q12805 MIR548AG2-201ENST00000581228 64 ntBASIC1.42□□□□□ -2.18
EFEMP1Q12805 AL157834.3-201ENST00000615543 103 ntBASIC1.42□□□□□ -2.18
EFEMP1Q12805 RNU6-495P-201ENST00000362995 107 ntBASIC1.41□□□□□ -2.18
EFEMP1Q12805 Y_RNA.118-201ENST00000363300 101 ntBASIC1.41□□□□□ -2.18
EFEMP1Q12805 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
EFEMP1Q12805 RNU7-102P-201ENST00000458948 62 ntBASIC1.41□□□□□ -2.18
EFEMP1Q12805 RNA5SP61-201ENST00000516453 100 ntBASIC1.41□□□□□ -2.18
EFEMP1Q12805 RNU6-165P-201ENST00000517170 99 ntBASIC1.41□□□□□ -2.18
EFEMP1Q12805 AC023827.1-201ENST00000569247 97 ntBASIC1.41□□□□□ -2.18
EFEMP1Q12805 MIR7978-201ENST00000636158 59 ntBASIC1.41□□□□□ -2.18
EFEMP1Q12805 AC073869.9-201ENST00000641610 120 ntBASIC1.41□□□□□ -2.18
EFEMP1Q12805 RNU6-645P-201ENST00000364649 106 ntBASIC1.4□□□□□ -2.19
EFEMP1Q12805 RNU6-1126P-201ENST00000384002 107 ntBASIC1.4□□□□□ -2.19
EFEMP1Q12805 SNORA75.2-201ENST00000391138 150 ntBASIC1.4□□□□□ -2.19
EFEMP1Q12805 SNORA75.3-201ENST00000391231 150 ntBASIC1.4□□□□□ -2.19
EFEMP1Q12805 RPS26P5-201ENST00000418544 335 ntBASIC1.4□□□□□ -2.19
EFEMP1Q12805 RNU7-24P-201ENST00000458867 62 ntBASIC1.4□□□□□ -2.19
EFEMP1Q12805 RNU1-123P-201ENST00000458950 160 ntBASIC1.4□□□□□ -2.19
EFEMP1Q12805 AC079140.2-201ENST00000506193 142 ntBASIC1.4□□□□□ -2.19
EFEMP1Q12805 SCARNA21.1-201ENST00000515996 128 ntBASIC1.4□□□□□ -2.19
EFEMP1Q12805 MIR4422-201ENST00000581938 83 ntBASIC1.4□□□□□ -2.19
EFEMP1Q12805 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
EFEMP1Q12805 RNU6-446P-201ENST00000362827 106 ntBASIC1.39□□□□□ -2.19
EFEMP1Q12805 RNU6-940P-201ENST00000363433 104 ntBASIC1.39□□□□□ -2.19
EFEMP1Q12805 Y_RNA.355-201ENST00000365462 98 ntBASIC1.39□□□□□ -2.19
EFEMP1Q12805 RNU6-54P-201ENST00000365563 107 ntBASIC1.39□□□□□ -2.19
EFEMP1Q12805 RNA5SP299-201ENST00000391203 116 ntBASIC1.39□□□□□ -2.19
EFEMP1Q12805 MIR938-201ENST00000401216 83 ntBASIC1.39□□□□□ -2.19
EFEMP1Q12805 AC048334.1-201ENST00000477975 159 ntBASIC1.39□□□□□ -2.19
EFEMP1Q12805 Y_RNA.722-201ENST00000517279 114 ntBASIC1.39□□□□□ -2.19
EFEMP1Q12805 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.39□□□□□ -2.19
EFEMP1Q12805 MIR3937-201ENST00000580135 106 ntBASIC1.39□□□□□ -2.19
EFEMP1Q12805 MIR3657-201ENST00000584818 117 ntBASIC1.39□□□□□ -2.19
EFEMP1Q12805 AL353770.2-201ENST00000620024 78 ntBASIC1.39□□□□□ -2.19
EFEMP1Q12805 AC027335.2-201ENST00000624030 375 ntBASIC1.39□□□□□ -2.19
EFEMP1Q12805 Y_RNA.32-201ENST00000362589 110 ntBASIC1.38□□□□□ -2.19
EFEMP1Q12805 SNORD115-24-201ENST00000363528 82 ntBASIC1.38□□□□□ -2.19
EFEMP1Q12805 RNU1-78P-201ENST00000391248 165 ntBASIC1.38□□□□□ -2.19
EFEMP1Q12805 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
EFEMP1Q12805 RNU7-104P-201ENST00000459398 79 ntBASIC1.37□□□□□ -2.19
EFEMP1Q12805 SNORA31.14-201ENST00000516728 116 ntBASIC1.37□□□□□ -2.19
EFEMP1Q12805 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
EFEMP1Q12805 RNU6-392P-201ENST00000364926 101 ntBASIC1.36□□□□□ -2.19
EFEMP1Q12805 Y_RNA.327-201ENST00000365201 102 ntBASIC1.36□□□□□ -2.19
EFEMP1Q12805 RNU6-1335P-201ENST00000365426 107 ntBASIC1.36□□□□□ -2.19
EFEMP1Q12805 RNU6-936P-201ENST00000384005 107 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms