Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 Y_RNA.183-201ENST00000363882 113 ntBASIC-2.91□□□□□ -2.88
HIST1H1AQ02539 Y_RNA.485-201ENST00000384395 102 ntBASIC-2.91□□□□□ -2.88
HIST1H1AQ02539 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.91□□□□□ -2.88
HIST1H1AQ02539 snoU13.17-201ENST00000458802 104 ntBASIC-2.91□□□□□ -2.88
HIST1H1AQ02539 RNU6-65P-201ENST00000516332 98 ntBASIC-2.91□□□□□ -2.88
HIST1H1AQ02539 RNY4P20-201ENST00000516678 93 ntBASIC-2.91□□□□□ -2.88
HIST1H1AQ02539 RNU6-980P-201ENST00000516925 103 ntBASIC-2.91□□□□□ -2.88
HIST1H1AQ02539 MIR3140-201ENST00000583685 90 ntBASIC-2.91□□□□□ -2.88
HIST1H1AQ02539 RNU6-1040P-201ENST00000383974 107 ntBASIC-2.92□□□□□ -2.88
HIST1H1AQ02539 RNU6-506P-201ENST00000516553 94 ntBASIC-2.92□□□□□ -2.88
HIST1H1AQ02539 RNU7-30P-201ENST00000516835 62 ntBASIC-2.92□□□□□ -2.88
HIST1H1AQ02539 Y_RNA.117-201ENST00000363294 101 ntBASIC-2.93□□□□□ -2.88
HIST1H1AQ02539 Y_RNA.275-201ENST00000364726 110 ntBASIC-2.93□□□□□ -2.88
HIST1H1AQ02539 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.93□□□□□ -2.88
HIST1H1AQ02539 RNU6-260P-201ENST00000384092 107 ntBASIC-2.93□□□□□ -2.88
HIST1H1AQ02539 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.93□□□□□ -2.88
HIST1H1AQ02539 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-2.93□□□□□ -2.88
HIST1H1AQ02539 MIR4536-1-201ENST00000583537 88 ntBASIC-2.93□□□□□ -2.88
HIST1H1AQ02539 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.94□□□□□ -2.88
HIST1H1AQ02539 SNORD116-6-201ENST00000384711 96 ntBASIC-2.94□□□□□ -2.88
HIST1H1AQ02539 MIR181A1-201ENST00000385026 110 ntBASIC-2.94□□□□□ -2.88
HIST1H1AQ02539 RNU6-695P-201ENST00000391157 104 ntBASIC-2.94□□□□□ -2.88
HIST1H1AQ02539 RNA5SP147-201ENST00000516493 109 ntBASIC-2.94□□□□□ -2.88
HIST1H1AQ02539 MIR4744-201ENST00000581563 82 ntBASIC-2.94□□□□□ -2.88
HIST1H1AQ02539 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-2.94□□□□□ -2.88
HIST1H1AQ02539 SNORA24B-201ENST00000384176 131 ntBASIC-2.95□□□□□ -2.88
HIST1H1AQ02539 SNORA7.5-201ENST00000410672 110 ntBASIC-2.95□□□□□ -2.88
HIST1H1AQ02539 Y_RNA.793-201ENST00000411222 111 ntBASIC-2.95□□□□□ -2.88
HIST1H1AQ02539 SNORD54-201ENST00000459159 67 ntBASIC-2.95□□□□□ -2.88
HIST1H1AQ02539 AC092794.1-201ENST00000612734 582 ntBASIC-2.95□□□□□ -2.88
HIST1H1AQ02539 MIR1255B1-201ENST00000636325 63 ntBASIC-2.95□□□□□ -2.88
HIST1H1AQ02539 Y_RNA.154-201ENST00000363624 102 ntBASIC-2.96□□□□□ -2.88
HIST1H1AQ02539 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.96□□□□□ -2.88
HIST1H1AQ02539 RNU1-115P-201ENST00000365329 160 ntBASIC-2.96□□□□□ -2.88
HIST1H1AQ02539 MIR519A2-201ENST00000384990 87 ntBASIC-2.96□□□□□ -2.88
HIST1H1AQ02539 RNU6-774P-201ENST00000363238 107 ntBASIC-2.97□□□□□ -2.88
HIST1H1AQ02539 RNU6-643P-201ENST00000384018 107 ntBASIC-2.97□□□□□ -2.88
HIST1H1AQ02539 SNORD2.1-201ENST00000458762 69 ntBASIC-2.97□□□□□ -2.88
HIST1H1AQ02539 RNA5SP405-201ENST00000363059 114 ntBASIC-2.98□□□□□ -2.89
HIST1H1AQ02539 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.98□□□□□ -2.89
HIST1H1AQ02539 RNU6-976P-201ENST00000516086 111 ntBASIC-2.98□□□□□ -2.89
HIST1H1AQ02539 AL365265.1-201ENST00000621045 234 ntBASIC-2.98□□□□□ -2.89
HIST1H1AQ02539 RNU6-194P-201ENST00000363862 105 ntBASIC-2.99□□□□□ -2.89
HIST1H1AQ02539 RNU7-88P-201ENST00000458752 63 ntBASIC-2.99□□□□□ -2.89
HIST1H1AQ02539 Y_RNA.661-201ENST00000516003 99 ntBASIC-2.99□□□□□ -2.89
HIST1H1AQ02539 Y_RNA.188-201ENST00000363952 111 ntBASIC-3□□□□□ -2.89
HIST1H1AQ02539 RNU6-578P-201ENST00000390980 103 ntBASIC-3□□□□□ -2.89
HIST1H1AQ02539 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-3□□□□□ -2.89
HIST1H1AQ02539 RNU6-121P-201ENST00000410525 99 ntBASIC-3□□□□□ -2.89
HIST1H1AQ02539 U7.5-201ENST00000517224 61 ntBASIC-3□□□□□ -2.89
HIST1H1AQ02539 MIR3139-201ENST00000579145 76 ntBASIC-3□□□□□ -2.89
HIST1H1AQ02539 AC090574.1-201ENST00000623186 233 ntBASIC-3□□□□□ -2.89
HIST1H1AQ02539 Y_RNA.71-201ENST00000362892 104 ntBASIC-3.01□□□□□ -2.89
HIST1H1AQ02539 Y_RNA.211-201ENST00000364164 101 ntBASIC-3.01□□□□□ -2.89
HIST1H1AQ02539 RNU6-841P-201ENST00000383872 107 ntBASIC-3.01□□□□□ -2.89
HIST1H1AQ02539 Y_RNA.651-201ENST00000459380 103 ntBASIC-3.01□□□□□ -2.89
HIST1H1AQ02539 MIR548AM-201ENST00000584298 74 ntBASIC-3.01□□□□□ -2.89
HIST1H1AQ02539 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-3.01□□□□□ -2.89
HIST1H1AQ02539 RNU6-132P-201ENST00000383863 107 ntBASIC-3.02□□□□□ -2.89
HIST1H1AQ02539 Y_RNA.559-201ENST00000384686 107 ntBASIC-3.02□□□□□ -2.89
HIST1H1AQ02539 Y_RNA.564-201ENST00000384708 106 ntBASIC-3.02□□□□□ -2.89
HIST1H1AQ02539 MIR3123-201ENST00000583417 75 ntBASIC-3.02□□□□□ -2.89
HIST1H1AQ02539 AC006254.2-201ENST00000603259 279 ntBASIC-3.02□□□□□ -2.89
HIST1H1AQ02539 AC080013.6-201ENST00000606185 215 ntBASIC-3.02□□□□□ -2.89
HIST1H1AQ02539 AL137067.1-201ENST00000615933 120 ntBASIC-3.02□□□□□ -2.89
HIST1H1AQ02539 Y_RNA.554-201ENST00000384672 102 ntBASIC-3.03□□□□□ -2.89
HIST1H1AQ02539 SNORA19.1-201ENST00000410656 129 ntBASIC-3.03□□□□□ -2.89
HIST1H1AQ02539 MIR3163-201ENST00000581592 73 ntBASIC-3.03□□□□□ -2.89
HIST1H1AQ02539 AL132765.2-201ENST00000610812 351 ntBASIC-3.03□□□□□ -2.89
HIST1H1AQ02539 Y_RNA.16-201ENST00000362421 102 ntBASIC-3.04□□□□□ -2.9
HIST1H1AQ02539 MIR203A-201ENST00000384836 110 ntBASIC-3.04□□□□□ -2.9
HIST1H1AQ02539 MT-TI-201ENST00000387365 69 ntBASIC-3.04□□□□□ -2.9
HIST1H1AQ02539 RNU6-518P-201ENST00000516056 96 ntBASIC-3.04□□□□□ -2.9
HIST1H1AQ02539 VTRNA2-1-201ENST00000602301 127 ntBASIC-3.04□□□□□ -2.9
HIST1H1AQ02539 Y_RNA.252-201ENST00000364556 101 ntBASIC-3.05□□□□□ -2.9
HIST1H1AQ02539 RNU6-382P-201ENST00000365181 106 ntBASIC-3.05□□□□□ -2.9
HIST1H1AQ02539 SNORA63.7-201ENST00000365579 123 ntBASIC-3.05□□□□□ -2.9
HIST1H1AQ02539 RNU6-1039P-201ENST00000383931 107 ntBASIC-3.05□□□□□ -2.9
HIST1H1AQ02539 MIR548Q-201ENST00000408404 100 ntBASIC-3.05□□□□□ -2.9
HIST1H1AQ02539 RNU6-651P-201ENST00000411040 105 ntBASIC-3.05□□□□□ -2.9
HIST1H1AQ02539 RNU4-88P-201ENST00000411220 86 ntBASIC-3.05□□□□□ -2.9
HIST1H1AQ02539 RNU6-1018P-201ENST00000516577 106 ntBASIC-3.05□□□□□ -2.9
HIST1H1AQ02539 AC021753.1-201ENST00000635724 168 ntBASIC-3.05□□□□□ -2.9
HIST1H1AQ02539 Y_RNA.82-201ENST00000363000 102 ntBASIC-3.06□□□□□ -2.9
HIST1H1AQ02539 Y_RNA.92-201ENST00000363043 102 ntBASIC-3.06□□□□□ -2.9
HIST1H1AQ02539 Y_RNA.235-201ENST00000364412 102 ntBASIC-3.06□□□□□ -2.9
HIST1H1AQ02539 RNU6-818P-201ENST00000364837 108 ntBASIC-3.06□□□□□ -2.9
HIST1H1AQ02539 Y_RNA.306-201ENST00000365015 102 ntBASIC-3.06□□□□□ -2.9
HIST1H1AQ02539 Y_RNA.312-201ENST00000365089 102 ntBASIC-3.06□□□□□ -2.9
HIST1H1AQ02539 Y_RNA.322-201ENST00000365151 102 ntBASIC-3.06□□□□□ -2.9
HIST1H1AQ02539 SNORD50.2-201ENST00000365465 70 ntBASIC-3.06□□□□□ -2.9
HIST1H1AQ02539 MIR548U-201ENST00000390728 81 ntBASIC-3.06□□□□□ -2.9
HIST1H1AQ02539 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-3.06□□□□□ -2.9
HIST1H1AQ02539 ELOCP20-201ENST00000422460 345 ntBASIC-3.06□□□□□ -2.9
HIST1H1AQ02539 RNU7-85P-201ENST00000458851 63 ntBASIC-3.06□□□□□ -2.9
HIST1H1AQ02539 Y_RNA.650-201ENST00000459002 102 ntBASIC-3.06□□□□□ -2.9
HIST1H1AQ02539 Y_RNA.777-201ENST00000516982 102 ntBASIC-3.06□□□□□ -2.9
HIST1H1AQ02539 MIR3657-201ENST00000584818 117 ntBASIC-3.06□□□□□ -2.9
HIST1H1AQ02539 Y_RNA.771-201ENST00000598668 102 ntBASIC-3.06□□□□□ -2.9
HIST1H1AQ02539 MIR6509-201ENST00000614603 85 ntBASIC-3.06□□□□□ -2.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms