Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 MIR4804-201ENST00000581683 73 ntBASIC1.5□□□□□ -2.17
ERVFC1P60507 MIR3140-201ENST00000583685 90 ntBASIC1.5□□□□□ -2.17
ERVFC1P60507 MIR96-201ENST00000362288 78 ntBASIC1.49□□□□□ -2.17
ERVFC1P60507 U3.27-201ENST00000391237 200 ntBASIC1.49□□□□□ -2.17
ERVFC1P60507 AC023827.1-201ENST00000569247 97 ntBASIC1.49□□□□□ -2.17
ERVFC1P60507 MIR664A-201ENST00000626086 82 ntBASIC1.49□□□□□ -2.17
ERVFC1P60507 SNORD115-44-201ENST00000365391 82 ntBASIC1.48□□□□□ -2.17
ERVFC1P60507 U6.81-201ENST00000612550 106 ntBASIC1.48□□□□□ -2.17
ERVFC1P60507 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
ERVFC1P60507 Y_RNA.371-201ENST00000365591 113 ntBASIC1.47□□□□□ -2.17
ERVFC1P60507 RNU6-42P-201ENST00000384165 107 ntBASIC1.47□□□□□ -2.17
ERVFC1P60507 SNORA8.1-201ENST00000384250 140 ntBASIC1.47□□□□□ -2.17
ERVFC1P60507 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
ERVFC1P60507 RNU6-910P-201ENST00000390844 107 ntBASIC1.47□□□□□ -2.17
ERVFC1P60507 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.47□□□□□ -2.17
ERVFC1P60507 MIR6078-201ENST00000611069 100 ntBASIC1.47□□□□□ -2.17
ERVFC1P60507 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.47□□□□□ -2.17
ERVFC1P60507 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
ERVFC1P60507 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
ERVFC1P60507 RNU6-1241P-201ENST00000384536 107 ntBASIC1.46□□□□□ -2.18
ERVFC1P60507 MIR7-2-201ENST00000384970 110 ntBASIC1.46□□□□□ -2.18
ERVFC1P60507 MIR451A-201ENST00000385059 72 ntBASIC1.46□□□□□ -2.18
ERVFC1P60507 SNORD12-201ENST00000391002 90 ntBASIC1.46□□□□□ -2.18
ERVFC1P60507 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.46□□□□□ -2.18
ERVFC1P60507 RPS29P23-201ENST00000458635 123 ntBASIC1.46□□□□□ -2.18
ERVFC1P60507 RMST_2.1-201ENST00000617263 136 ntBASIC1.46□□□□□ -2.18
ERVFC1P60507 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.46□□□□□ -2.18
ERVFC1P60507 RNU6-330P-201ENST00000363015 107 ntBASIC1.45□□□□□ -2.18
ERVFC1P60507 RNU6-540P-201ENST00000384622 101 ntBASIC1.45□□□□□ -2.18
ERVFC1P60507 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
ERVFC1P60507 RNU6-977P-201ENST00000516411 103 ntBASIC1.45□□□□□ -2.18
ERVFC1P60507 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
ERVFC1P60507 uc_338.16-201ENST00000621804 95 ntBASIC1.45□□□□□ -2.18
ERVFC1P60507 RNU6-824P-201ENST00000363724 104 ntBASIC1.44□□□□□ -2.18
ERVFC1P60507 Y_RNA.174-201ENST00000363781 105 ntBASIC1.44□□□□□ -2.18
ERVFC1P60507 Y_RNA.386-201ENST00000383913 105 ntBASIC1.44□□□□□ -2.18
ERVFC1P60507 RNU6-649P-201ENST00000384463 107 ntBASIC1.44□□□□□ -2.18
ERVFC1P60507 RNU1-119P-201ENST00000391122 165 ntBASIC1.44□□□□□ -2.18
ERVFC1P60507 RNU6-994P-201ENST00000410507 111 ntBASIC1.44□□□□□ -2.18
ERVFC1P60507 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.44□□□□□ -2.18
ERVFC1P60507 RNU6-287P-201ENST00000516230 98 ntBASIC1.44□□□□□ -2.18
ERVFC1P60507 RNA5SP220-201ENST00000516298 104 ntBASIC1.44□□□□□ -2.18
ERVFC1P60507 MIR3675-201ENST00000583661 73 ntBASIC1.44□□□□□ -2.18
ERVFC1P60507 AL078603.1-201ENST00000603824 313 ntBASIC1.44□□□□□ -2.18
ERVFC1P60507 MIR1-1-201ENST00000362147 71 ntBASIC1.43□□□□□ -2.18
ERVFC1P60507 RNA5SP403-201ENST00000363598 108 ntBASIC1.43□□□□□ -2.18
ERVFC1P60507 MIR154-201ENST00000385243 84 ntBASIC1.43□□□□□ -2.18
ERVFC1P60507 MIR1827-201ENST00000408549 66 ntBASIC1.43□□□□□ -2.18
ERVFC1P60507 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.43□□□□□ -2.18
ERVFC1P60507 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
ERVFC1P60507 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.42□□□□□ -2.18
ERVFC1P60507 MIR320A-201ENST00000385302 82 ntBASIC1.42□□□□□ -2.18
ERVFC1P60507 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.42□□□□□ -2.18
ERVFC1P60507 SNORA70.22-201ENST00000517160 124 ntBASIC1.42□□□□□ -2.18
ERVFC1P60507 RNU6-1057P-201ENST00000517162 102 ntBASIC1.42□□□□□ -2.18
ERVFC1P60507 MIR100-201ENST00000385259 80 ntBASIC1.41□□□□□ -2.18
ERVFC1P60507 RNU6-1177P-201ENST00000391058 104 ntBASIC1.41□□□□□ -2.18
ERVFC1P60507 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
ERVFC1P60507 RNU6-1052P-201ENST00000411398 104 ntBASIC1.41□□□□□ -2.18
ERVFC1P60507 RNU6-719P-201ENST00000516671 104 ntBASIC1.41□□□□□ -2.18
ERVFC1P60507 SNORA31.14-201ENST00000516728 116 ntBASIC1.41□□□□□ -2.18
ERVFC1P60507 MIR3660-201ENST00000584845 100 ntBASIC1.41□□□□□ -2.18
ERVFC1P60507 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
ERVFC1P60507 Y_RNA.32-201ENST00000362589 110 ntBASIC1.4□□□□□ -2.19
ERVFC1P60507 SNORD115-31-201ENST00000365318 82 ntBASIC1.4□□□□□ -2.19
ERVFC1P60507 SNORD26-201ENST00000384147 75 ntBASIC1.4□□□□□ -2.19
ERVFC1P60507 MIR216B-201ENST00000390186 82 ntBASIC1.4□□□□□ -2.19
ERVFC1P60507 SNORA40.6-201ENST00000391153 128 ntBASIC1.4□□□□□ -2.19
ERVFC1P60507 MIR1265-201ENST00000408444 86 ntBASIC1.4□□□□□ -2.19
ERVFC1P60507 MIR2113-201ENST00000459007 91 ntBASIC1.4□□□□□ -2.19
ERVFC1P60507 AC125388.1-201ENST00000459631 156 ntBASIC1.4□□□□□ -2.19
ERVFC1P60507 RNU6-752P-201ENST00000516376 102 ntBASIC1.4□□□□□ -2.19
ERVFC1P60507 RNU7-13P-201ENST00000516413 62 ntBASIC1.4□□□□□ -2.19
ERVFC1P60507 MIR6734-201ENST00000621166 68 ntBASIC1.4□□□□□ -2.19
ERVFC1P60507 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
ERVFC1P60507 RNU1-93P-201ENST00000364704 169 ntBASIC1.39□□□□□ -2.19
ERVFC1P60507 RNU6-1126P-201ENST00000384002 107 ntBASIC1.39□□□□□ -2.19
ERVFC1P60507 SNORD30.1-201ENST00000391309 70 ntBASIC1.39□□□□□ -2.19
ERVFC1P60507 U6.111-201ENST00000636093 83 ntBASIC1.39□□□□□ -2.19
ERVFC1P60507 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
ERVFC1P60507 SNORD115-24-201ENST00000363528 82 ntBASIC1.38□□□□□ -2.19
ERVFC1P60507 SNORD114-27-201ENST00000363766 70 ntBASIC1.38□□□□□ -2.19
ERVFC1P60507 MIR520F-201ENST00000384824 87 ntBASIC1.38□□□□□ -2.19
ERVFC1P60507 AC067940.1-201ENST00000458411 300 ntBASIC1.38□□□□□ -2.19
ERVFC1P60507 RNU7-161P-201ENST00000517289 62 ntBASIC1.38□□□□□ -2.19
ERVFC1P60507 MIR3920-201ENST00000581751 86 ntBASIC1.38□□□□□ -2.19
ERVFC1P60507 MIR8053-201ENST00000613344 75 ntBASIC1.38□□□□□ -2.19
ERVFC1P60507 MIR26B-201ENST00000362251 77 ntBASIC1.37□□□□□ -2.19
ERVFC1P60507 Y_RNA.340-201ENST00000365330 92 ntBASIC1.37□□□□□ -2.19
ERVFC1P60507 RNU6-800P-201ENST00000384473 103 ntBASIC1.37□□□□□ -2.19
ERVFC1P60507 Y_RNA.540-201ENST00000384638 111 ntBASIC1.37□□□□□ -2.19
ERVFC1P60507 RNU6-663P-201ENST00000391105 106 ntBASIC1.37□□□□□ -2.19
ERVFC1P60507 RNU7-24P-201ENST00000458867 62 ntBASIC1.37□□□□□ -2.19
ERVFC1P60507 MIR548AG2-201ENST00000581228 64 ntBASIC1.37□□□□□ -2.19
ERVFC1P60507 RNU6-471P-201ENST00000383944 106 ntBASIC1.36□□□□□ -2.19
ERVFC1P60507 MIR520E-201ENST00000384867 87 ntBASIC1.36□□□□□ -2.19
ERVFC1P60507 MIR617-201ENST00000385030 97 ntBASIC1.36□□□□□ -2.19
ERVFC1P60507 AC002429.1-201ENST00000437672 148 ntBASIC1.36□□□□□ -2.19
ERVFC1P60507 RNU6-135P-201ENST00000516769 101 ntBASIC1.36□□□□□ -2.19
ERVFC1P60507 RNA5SP480-201ENST00000516840 109 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 364.9 ms