Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 uc_338.36-201ENST00000622331 158 ntBASIC-0.55□□□□□ -2.5
CDH4P55283 MIR20A-201ENST00000362279 71 ntBASIC-0.56□□□□□ -2.5
CDH4P55283 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.56□□□□□ -2.5
CDH4P55283 SNORD116-18-201ENST00000383961 92 ntBASIC-0.56□□□□□ -2.5
CDH4P55283 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.56□□□□□ -2.5
CDH4P55283 RNU6-409P-201ENST00000384114 104 ntBASIC-0.56□□□□□ -2.5
CDH4P55283 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.56□□□□□ -2.5
CDH4P55283 RNU6-455P-201ENST00000384681 107 ntBASIC-0.56□□□□□ -2.5
CDH4P55283 MIR9-2-201ENST00000384838 87 ntBASIC-0.56□□□□□ -2.5
CDH4P55283 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.56□□□□□ -2.5
CDH4P55283 RNU6-388P-201ENST00000517012 105 ntBASIC-0.56□□□□□ -2.5
CDH4P55283 RNU6-389P-201ENST00000517048 105 ntBASIC-0.56□□□□□ -2.5
CDH4P55283 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.56□□□□□ -2.5
CDH4P55283 MIR548X2-201ENST00000579776 100 ntBASIC-0.56□□□□□ -2.5
CDH4P55283 RNU6-664P-201ENST00000362381 107 ntBASIC-0.57□□□□□ -2.5
CDH4P55283 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.57□□□□□ -2.5
CDH4P55283 SNORD101-201ENST00000384027 73 ntBASIC-0.57□□□□□ -2.5
CDH4P55283 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.57□□□□□ -2.5
CDH4P55283 AL442128.1-201ENST00000615151 90 ntBASIC-0.57□□□□□ -2.5
CDH4P55283 MIR548AZ-201ENST00000616567 95 ntBASIC-0.57□□□□□ -2.5
CDH4P55283 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.58□□□□□ -2.5
CDH4P55283 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.58□□□□□ -2.5
CDH4P55283 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.58□□□□□ -2.5
CDH4P55283 MIR604-201ENST00000384880 94 ntBASIC-0.58□□□□□ -2.5
CDH4P55283 AC244090.1-201ENST00000441884 93 ntBASIC-0.58□□□□□ -2.5
CDH4P55283 snoU13.11-201ENST00000459219 104 ntBASIC-0.58□□□□□ -2.5
CDH4P55283 RNA5SP66-201ENST00000517178 101 ntBASIC-0.58□□□□□ -2.5
CDH4P55283 MIR548O2-201ENST00000616090 70 ntBASIC-0.58□□□□□ -2.5
CDH4P55283 RNU6-804P-201ENST00000384286 107 ntBASIC-0.59□□□□□ -2.5
CDH4P55283 MT-TG-201ENST00000387429 68 ntBASIC-0.59□□□□□ -2.5
CDH4P55283 RNU6-466P-201ENST00000391224 103 ntBASIC-0.59□□□□□ -2.5
CDH4P55283 MIR1265-201ENST00000408444 86 ntBASIC-0.59□□□□□ -2.5
CDH4P55283 RNU6-758P-201ENST00000516292 89 ntBASIC-0.59□□□□□ -2.5
CDH4P55283 U7.2-201ENST00000607576 63 ntBASIC-0.59□□□□□ -2.5
CDH4P55283 RNY4P6-201ENST00000363667 96 ntBASIC-0.6□□□□□ -2.51
CDH4P55283 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.6□□□□□ -2.51
CDH4P55283 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.6□□□□□ -2.51
CDH4P55283 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.6□□□□□ -2.51
CDH4P55283 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.6□□□□□ -2.51
CDH4P55283 MIR569-201ENST00000385228 96 ntBASIC-0.6□□□□□ -2.51
CDH4P55283 SNORA49-201ENST00000386157 136 ntBASIC-0.6□□□□□ -2.51
CDH4P55283 RNA5SP451-201ENST00000410588 110 ntBASIC-0.6□□□□□ -2.51
CDH4P55283 MIR3144-201ENST00000579460 79 ntBASIC-0.6□□□□□ -2.51
CDH4P55283 AC145423.2-201ENST00000610631 239 ntBASIC-0.6□□□□□ -2.51
CDH4P55283 AL391099.1-201ENST00000624635 187 ntBASIC-0.6□□□□□ -2.51
CDH4P55283 RNA5SP368-201ENST00000364298 116 ntBASIC-0.61□□□□□ -2.51
CDH4P55283 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.61□□□□□ -2.51
CDH4P55283 MIR216B-201ENST00000390186 82 ntBASIC-0.61□□□□□ -2.51
CDH4P55283 RNU6-816P-201ENST00000390914 107 ntBASIC-0.61□□□□□ -2.51
CDH4P55283 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.61□□□□□ -2.51
CDH4P55283 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.61□□□□□ -2.51
CDH4P55283 Z95118.1-201ENST00000421372 247 ntBASIC-0.61□□□□□ -2.51
CDH4P55283 AC099654.10-201ENST00000640395 161 ntBASIC-0.61□□□□□ -2.51
CDH4P55283 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.62□□□□□ -2.51
CDH4P55283 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.62□□□□□ -2.51
CDH4P55283 RNU6-900P-201ENST00000384498 102 ntBASIC-0.62□□□□□ -2.51
CDH4P55283 RNU6-935P-201ENST00000410371 100 ntBASIC-0.62□□□□□ -2.51
CDH4P55283 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.62□□□□□ -2.51
CDH4P55283 RNA5SP169-201ENST00000517268 117 ntBASIC-0.62□□□□□ -2.51
CDH4P55283 AP000676.1-201ENST00000533307 52 ntBASIC-0.62□□□□□ -2.51
CDH4P55283 AC108676.2-201ENST00000605225 163 ntBASIC-0.62□□□□□ -2.51
CDH4P55283 AC025166.1-201ENST00000612411 163 ntBASIC-0.62□□□□□ -2.51
CDH4P55283 MTND5P18-201ENST00000445624 1801 ntBASIC-0.63□□□□□ -2.51
CDH4P55283 SNORD114-14-201ENST00000362723 75 ntBASIC-0.63□□□□□ -2.51
CDH4P55283 SNORD58C-201ENST00000365223 64 ntBASIC-0.63□□□□□ -2.51
CDH4P55283 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.63□□□□□ -2.51
CDH4P55283 RNU6-75P-201ENST00000515944 104 ntBASIC-0.63□□□□□ -2.51
CDH4P55283 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.63□□□□□ -2.51
CDH4P55283 MIR4719-201ENST00000585233 84 ntBASIC-0.63□□□□□ -2.51
CDH4P55283 AC093726.3-201ENST00000637588 150 ntBASIC-0.63□□□□□ -2.51
CDH4P55283 MIR6086-201ENST00000638065 55 ntBASIC-0.63□□□□□ -2.51
CDH4P55283 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.64□□□□□ -2.51
CDH4P55283 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.64□□□□□ -2.51
CDH4P55283 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.64□□□□□ -2.51
CDH4P55283 SNORD56B-201ENST00000384713 71 ntBASIC-0.64□□□□□ -2.51
CDH4P55283 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.64□□□□□ -2.51
CDH4P55283 RPS29P8-201ENST00000445109 171 ntBASIC-0.64□□□□□ -2.51
CDH4P55283 RNA5SP272-201ENST00000516095 111 ntBASIC-0.64□□□□□ -2.51
CDH4P55283 RNA5SP476-201ENST00000516613 103 ntBASIC-0.64□□□□□ -2.51
CDH4P55283 MIR4436A-201ENST00000585278 85 ntBASIC-0.64□□□□□ -2.51
CDH4P55283 MIR577-201ENST00000385196 96 ntBASIC-0.65□□□□□ -2.51
CDH4P55283 RNA5SP25-201ENST00000410815 110 ntBASIC-0.65□□□□□ -2.51
CDH4P55283 AL445193.1-201ENST00000441183 141 ntBASIC-0.65□□□□□ -2.51
CDH4P55283 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.65□□□□□ -2.51
CDH4P55283 RNU6-54P-201ENST00000365563 107 ntBASIC-0.66□□□□□ -2.52
CDH4P55283 MIR451A-201ENST00000385059 72 ntBASIC-0.66□□□□□ -2.52
CDH4P55283 SNORA3B-201ENST00000391305 131 ntBASIC-0.66□□□□□ -2.52
CDH4P55283 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.66□□□□□ -2.52
CDH4P55283 RNU7-55P-201ENST00000459426 62 ntBASIC-0.66□□□□□ -2.52
CDH4P55283 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.66□□□□□ -2.52
CDH4P55283 MTND5P41-201ENST00000517498 206 ntBASIC-0.66□□□□□ -2.52
CDH4P55283 MIR4280-201ENST00000582178 76 ntBASIC-0.66□□□□□ -2.52
CDH4P55283 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.66□□□□□ -2.52
CDH4P55283 AC025521.1-201ENST00000621624 286 ntBASIC-0.66□□□□□ -2.52
CDH4P55283 SNORD115-25-201ENST00000362619 82 ntBASIC-0.67□□□□□ -2.52
CDH4P55283 SNORD95.1-201ENST00000364099 68 ntBASIC-0.67□□□□□ -2.52
CDH4P55283 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.67□□□□□ -2.52
CDH4P55283 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.67□□□□□ -2.52
CDH4P55283 MIR582-201ENST00000365731 98 ntBASIC-0.67□□□□□ -2.52
CDH4P55283 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms