Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.53□□□□□ -2.32
COPAP53621 RNU7-61P-201ENST00000515897 61 ntBASIC0.53□□□□□ -2.32
COPAP53621 RNU6-158P-201ENST00000517104 100 ntBASIC0.53□□□□□ -2.32
COPAP53621 RNU6-957P-201ENST00000363652 99 ntBASIC0.52□□□□□ -2.33
COPAP53621 SNORD115-44-201ENST00000365391 82 ntBASIC0.52□□□□□ -2.33
COPAP53621 AL161932.1-201ENST00000437408 146 ntBASIC0.52□□□□□ -2.33
COPAP53621 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
COPAP53621 snoU13.11-201ENST00000459219 104 ntBASIC0.52□□□□□ -2.33
COPAP53621 SNORA40.13-201ENST00000516379 120 ntBASIC0.52□□□□□ -2.33
COPAP53621 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.52□□□□□ -2.33
COPAP53621 Y_RNA.283-201ENST00000364798 112 ntBASIC0.51□□□□□ -2.33
COPAP53621 Y_RNA.495-201ENST00000384435 112 ntBASIC0.51□□□□□ -2.33
COPAP53621 MTATP8P2-201ENST00000435212 202 ntBASIC0.51□□□□□ -2.33
COPAP53621 SNORA68.3-201ENST00000515906 83 ntBASIC0.51□□□□□ -2.33
COPAP53621 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
COPAP53621 Y_RNA.81-201ENST00000362997 102 ntBASIC0.5□□□□□ -2.33
COPAP53621 SNORD58A-201ENST00000383875 65 ntBASIC0.5□□□□□ -2.33
COPAP53621 SNORD41.1-201ENST00000391000 69 ntBASIC0.5□□□□□ -2.33
COPAP53621 Y_RNA.596-201ENST00000410462 109 ntBASIC0.5□□□□□ -2.33
COPAP53621 RNU7-74P-201ENST00000459104 62 ntBASIC0.5□□□□□ -2.33
COPAP53621 RNU6-65P-201ENST00000516332 98 ntBASIC0.5□□□□□ -2.33
COPAP53621 AP001318.4-201ENST00000616637 121 ntBASIC0.5□□□□□ -2.33
COPAP53621 SNORD116-10-201ENST00000363791 102 ntBASIC0.49□□□□□ -2.33
COPAP53621 RNU6-1126P-201ENST00000384002 107 ntBASIC0.49□□□□□ -2.33
COPAP53621 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.49□□□□□ -2.33
COPAP53621 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.49□□□□□ -2.33
COPAP53621 MIR3920-201ENST00000581751 86 ntBASIC0.49□□□□□ -2.33
COPAP53621 MIR4536-1-201ENST00000583537 88 ntBASIC0.49□□□□□ -2.33
COPAP53621 RNU2-59P-201ENST00000410482 191 ntBASIC0.48□□□□□ -2.33
COPAP53621 MIR5087-201ENST00000635826 76 ntBASIC0.48□□□□□ -2.33
COPAP53621 RNU6-519P-201ENST00000410590 108 ntBASIC0.47□□□□□ -2.33
COPAP53621 AC069271.1-201ENST00000445577 156 ntBASIC0.47□□□□□ -2.33
COPAP53621 RNU6-863P-201ENST00000515989 104 ntBASIC0.47□□□□□ -2.33
COPAP53621 U7.3-201ENST00000616123 62 ntBASIC0.47□□□□□ -2.33
COPAP53621 AL162376.1-201ENST00000624117 175 ntBASIC0.47□□□□□ -2.33
COPAP53621 U6.100-201ENST00000636230 99 ntBASIC0.47□□□□□ -2.33
COPAP53621 MIRLET7D-201ENST00000362263 87 ntBASIC0.46□□□□□ -2.34
COPAP53621 RNU6-153P-201ENST00000364422 104 ntBASIC0.46□□□□□ -2.34
COPAP53621 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
COPAP53621 RNU6-162P-201ENST00000516228 103 ntBASIC0.46□□□□□ -2.34
COPAP53621 Y_RNA.677-201ENST00000516401 85 ntBASIC0.46□□□□□ -2.34
COPAP53621 MIR924-201ENST00000638017 53 ntBASIC0.46□□□□□ -2.34
COPAP53621 RNU6-509P-201ENST00000363519 107 ntBASIC0.45□□□□□ -2.34
COPAP53621 SNORD101-201ENST00000384027 73 ntBASIC0.45□□□□□ -2.34
COPAP53621 AC243829.6-201ENST00000612652 106 ntBASIC0.45□□□□□ -2.34
COPAP53621 AC073869.9-201ENST00000641610 120 ntBASIC0.45□□□□□ -2.34
COPAP53621 SNORD44.1-201ENST00000363202 61 ntBASIC0.44□□□□□ -2.34
COPAP53621 MIR617-201ENST00000385030 97 ntBASIC0.44□□□□□ -2.34
COPAP53621 RNU6-269P-201ENST00000391077 97 ntBASIC0.44□□□□□ -2.34
COPAP53621 RNU6-168P-201ENST00000516189 101 ntBASIC0.44□□□□□ -2.34
COPAP53621 RNU6-1057P-201ENST00000517162 102 ntBASIC0.44□□□□□ -2.34
COPAP53621 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.44□□□□□ -2.34
COPAP53621 RNU6-664P-201ENST00000362381 107 ntBASIC0.43□□□□□ -2.34
COPAP53621 RNA5SP457-201ENST00000363657 124 ntBASIC0.43□□□□□ -2.34
COPAP53621 Y_RNA.348-201ENST00000365403 103 ntBASIC0.43□□□□□ -2.34
COPAP53621 VTRNA1-3-201ENST00000365645 89 ntBASIC0.43□□□□□ -2.34
COPAP53621 RNU7-85P-201ENST00000458851 63 ntBASIC0.43□□□□□ -2.34
COPAP53621 MIR2113-201ENST00000459007 91 ntBASIC0.43□□□□□ -2.34
COPAP53621 RNU6-287P-201ENST00000516230 98 ntBASIC0.43□□□□□ -2.34
COPAP53621 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.42□□□□□ -2.34
COPAP53621 AC090625.1-201ENST00000357130 210 ntBASIC0.42□□□□□ -2.34
COPAP53621 MIR103A1-201ENST00000362165 78 ntBASIC0.42□□□□□ -2.34
COPAP53621 MIR330-201ENST00000362196 94 ntBASIC0.42□□□□□ -2.34
COPAP53621 Y_RNA.207-201ENST00000364142 106 ntBASIC0.42□□□□□ -2.34
COPAP53621 Y_RNA.239-201ENST00000364444 113 ntBASIC0.42□□□□□ -2.34
COPAP53621 Y_RNA.258-201ENST00000364613 105 ntBASIC0.42□□□□□ -2.34
COPAP53621 Y_RNA.423-201ENST00000384057 113 ntBASIC0.42□□□□□ -2.34
COPAP53621 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
COPAP53621 RNU6-75P-201ENST00000515944 104 ntBASIC0.42□□□□□ -2.34
COPAP53621 RNA5SP330-201ENST00000517096 96 ntBASIC0.42□□□□□ -2.34
COPAP53621 MTRNR2L2-201ENST00000604882 87 ntBASIC0.42□□□□□ -2.34
COPAP53621 Y_RNA.290-201ENST00000364879 114 ntBASIC0.41□□□□□ -2.34
COPAP53621 MIR548U-201ENST00000390728 81 ntBASIC0.41□□□□□ -2.34
COPAP53621 SNORD4B-201ENST00000459083 72 ntBASIC0.41□□□□□ -2.34
COPAP53621 MIR4752-201ENST00000579672 72 ntBASIC0.41□□□□□ -2.34
COPAP53621 MIR4696-201ENST00000581431 70 ntBASIC0.41□□□□□ -2.34
COPAP53621 RNA5SP89-201ENST00000410300 108 ntBASIC0.4□□□□□ -2.35
COPAP53621 Y_RNA.609-201ENST00000410669 89 ntBASIC0.4□□□□□ -2.35
COPAP53621 RNU6-848P-201ENST00000515948 107 ntBASIC0.4□□□□□ -2.35
COPAP53621 RNU6-617P-201ENST00000516147 107 ntBASIC0.4□□□□□ -2.35
COPAP53621 RNU6-473P-201ENST00000516164 107 ntBASIC0.4□□□□□ -2.35
COPAP53621 RNU6-1049P-201ENST00000516414 107 ntBASIC0.4□□□□□ -2.35
COPAP53621 MIR548AG2-201ENST00000581228 64 ntBASIC0.4□□□□□ -2.35
COPAP53621 MIR8087-201ENST00000612745 78 ntBASIC0.4□□□□□ -2.35
COPAP53621 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
COPAP53621 Y_RNA.115-201ENST00000363272 98 ntBASIC0.39□□□□□ -2.35
COPAP53621 Y_RNA.190-201ENST00000363964 101 ntBASIC0.39□□□□□ -2.35
COPAP53621 SNORA2A-201ENST00000383885 135 ntBASIC0.39□□□□□ -2.35
COPAP53621 MIR519E-201ENST00000385075 84 ntBASIC0.39□□□□□ -2.35
COPAP53621 RNU6-935P-201ENST00000410371 100 ntBASIC0.39□□□□□ -2.35
COPAP53621 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.39□□□□□ -2.35
COPAP53621 MALAT1.1-201ENST00000618249 95 ntBASIC0.39□□□□□ -2.35
COPAP53621 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.39□□□□□ -2.35
COPAP53621 MIRLET7F1-201ENST00000362202 87 ntBASIC0.38□□□□□ -2.35
COPAP53621 RNU6-905P-201ENST00000384434 107 ntBASIC0.38□□□□□ -2.35
COPAP53621 AC006210.1-201ENST00000424882 111 ntBASIC0.38□□□□□ -2.35
COPAP53621 RNA5SP134-201ENST00000516492 96 ntBASIC0.38□□□□□ -2.35
COPAP53621 RNA5SP62-201ENST00000363457 110 ntBASIC0.37□□□□□ -2.35
COPAP53621 RNU6-640P-201ENST00000363693 105 ntBASIC0.37□□□□□ -2.35
COPAP53621 RNU6-811P-201ENST00000384069 107 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms