Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.84□□□□□ -2.7
NUP98P52948 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.84□□□□□ -2.7
NUP98P52948 RNU6-762P-201ENST00000517107 102 ntBASIC-1.84□□□□□ -2.7
NUP98P52948 AC108081.1-201ENST00000604358 221 ntBASIC-1.84□□□□□ -2.7
NUP98P52948 AC073869.6-201ENST00000640656 341 ntBASIC-1.84□□□□□ -2.7
NUP98P52948 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.85□□□□□ -2.71
NUP98P52948 RNU6-616P-201ENST00000384353 107 ntBASIC-1.85□□□□□ -2.71
NUP98P52948 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.85□□□□□ -2.71
NUP98P52948 AC090616.4-201ENST00000448026 115 ntBASIC-1.85□□□□□ -2.71
NUP98P52948 RNU6-1143P-201ENST00000516125 104 ntBASIC-1.85□□□□□ -2.71
NUP98P52948 RNU6-978P-201ENST00000364371 103 ntBASIC-1.86□□□□□ -2.71
NUP98P52948 RNU6-818P-201ENST00000364837 108 ntBASIC-1.86□□□□□ -2.71
NUP98P52948 RNU6-101P-201ENST00000410323 104 ntBASIC-1.86□□□□□ -2.71
NUP98P52948 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.86□□□□□ -2.71
NUP98P52948 Y_RNA.5-201ENST00000362334 102 ntBASIC-1.87□□□□□ -2.71
NUP98P52948 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.87□□□□□ -2.71
NUP98P52948 RNU6-194P-201ENST00000363862 105 ntBASIC-1.87□□□□□ -2.71
NUP98P52948 MT-TM-201ENST00000387377 68 ntBASIC-1.87□□□□□ -2.71
NUP98P52948 MIR1302-11-201ENST00000408051 138 ntBASIC-1.87□□□□□ -2.71
NUP98P52948 MIR1302-9-201ENST00000408365 138 ntBASIC-1.87□□□□□ -2.71
NUP98P52948 MIR1302-10-201ENST00000408734 138 ntBASIC-1.87□□□□□ -2.71
NUP98P52948 SNORD2.1-201ENST00000458762 69 ntBASIC-1.87□□□□□ -2.71
NUP98P52948 RNU6-521P-201ENST00000516663 105 ntBASIC-1.87□□□□□ -2.71
NUP98P52948 MIR1302-2-201ENST00000607096 138 ntBASIC-1.87□□□□□ -2.71
NUP98P52948 RNY3P14-201ENST00000384309 102 ntBASIC-1.87□□□□□ -2.71
NUP98P52948 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.87□□□□□ -2.71
NUP98P52948 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.87□□□□□ -2.71
NUP98P52948 AC090617.8-201ENST00000623339 167 ntBASIC-1.87□□□□□ -2.71
NUP98P52948 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.88□□□□□ -2.71
NUP98P52948 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.88□□□□□ -2.71
NUP98P52948 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.88□□□□□ -2.71
NUP98P52948 MIR34C-201ENST00000384831 77 ntBASIC-1.88□□□□□ -2.71
NUP98P52948 SNORD42B-201ENST00000458893 67 ntBASIC-1.88□□□□□ -2.71
NUP98P52948 RNU6-718P-201ENST00000516166 105 ntBASIC-1.88□□□□□ -2.71
NUP98P52948 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.88□□□□□ -2.71
NUP98P52948 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.88□□□□□ -2.71
NUP98P52948 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.89□□□□□ -2.71
NUP98P52948 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.89□□□□□ -2.71
NUP98P52948 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.89□□□□□ -2.71
NUP98P52948 RNU6-578P-201ENST00000390980 103 ntBASIC-1.89□□□□□ -2.71
NUP98P52948 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.89□□□□□ -2.71
NUP98P52948 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.89□□□□□ -2.71
NUP98P52948 CYP3A54P-201ENST00000566950 75 ntBASIC-1.89□□□□□ -2.71
NUP98P52948 AC021753.1-201ENST00000635724 168 ntBASIC-1.89□□□□□ -2.71
NUP98P52948 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.89□□□□□ -2.71
NUP98P52948 RNU6-770P-201ENST00000363929 105 ntBASIC-1.89□□□□□ -2.71
NUP98P52948 RNU6-935P-201ENST00000410371 100 ntBASIC-1.89□□□□□ -2.71
NUP98P52948 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.89□□□□□ -2.71
NUP98P52948 RNU6-841P-201ENST00000383872 107 ntBASIC-1.9□□□□□ -2.71
NUP98P52948 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.9□□□□□ -2.71
NUP98P52948 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.9□□□□□ -2.71
NUP98P52948 MIR451A-201ENST00000385059 72 ntBASIC-1.9□□□□□ -2.71
NUP98P52948 RNU6-651P-201ENST00000411040 105 ntBASIC-1.9□□□□□ -2.71
NUP98P52948 AC092794.1-201ENST00000612734 582 ntBASIC-1.9□□□□□ -2.71
NUP98P52948 AL512310.12-203ENST00000640543 90 ntBASIC-1.9□□□□□ -2.71
NUP98P52948 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.91□□□□□ -2.71
NUP98P52948 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.91□□□□□ -2.71
NUP98P52948 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.91□□□□□ -2.71
NUP98P52948 RNU6-495P-201ENST00000362995 107 ntBASIC-1.91□□□□□ -2.72
NUP98P52948 U7.5-201ENST00000517224 61 ntBASIC-1.91□□□□□ -2.72
NUP98P52948 MIR548AM-201ENST00000584298 74 ntBASIC-1.91□□□□□ -2.72
NUP98P52948 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.92□□□□□ -2.72
NUP98P52948 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.92□□□□□ -2.72
NUP98P52948 SNORD18B-201ENST00000365659 72 ntBASIC-1.92□□□□□ -2.72
NUP98P52948 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.92□□□□□ -2.72
NUP98P52948 RNU6-774P-201ENST00000363238 107 ntBASIC-1.93□□□□□ -2.72
NUP98P52948 RNU4-24P-201ENST00000364565 139 ntBASIC-1.93□□□□□ -2.72
NUP98P52948 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.93□□□□□ -2.72
NUP98P52948 MIR1255B2-201ENST00000408618 67 ntBASIC-1.93□□□□□ -2.72
NUP98P52948 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.93□□□□□ -2.72
NUP98P52948 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.93□□□□□ -2.72
NUP98P52948 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.94□□□□□ -2.72
NUP98P52948 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.94□□□□□ -2.72
NUP98P52948 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.94□□□□□ -2.72
NUP98P52948 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.94□□□□□ -2.72
NUP98P52948 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.94□□□□□ -2.72
NUP98P52948 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.94□□□□□ -2.72
NUP98P52948 SNORD19-201ENST00000391191 68 ntBASIC-1.94□□□□□ -2.72
NUP98P52948 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.94□□□□□ -2.72
NUP98P52948 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.94□□□□□ -2.72
NUP98P52948 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.94□□□□□ -2.72
NUP98P52948 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.94□□□□□ -2.72
NUP98P52948 MIR4536-1-201ENST00000583537 88 ntBASIC-1.94□□□□□ -2.72
NUP98P52948 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.94□□□□□ -2.72
NUP98P52948 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.94□□□□□ -2.72
NUP98P52948 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.94□□□□□ -2.72
NUP98P52948 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.94□□□□□ -2.72
NUP98P52948 Y_RNA.262-201ENST00000364641 102 ntBASIC-1.94□□□□□ -2.72
NUP98P52948 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.94□□□□□ -2.72
NUP98P52948 RNU6-976P-201ENST00000516086 111 ntBASIC-1.94□□□□□ -2.72
NUP98P52948 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.94□□□□□ -2.72
NUP98P52948 AL137067.1-201ENST00000615933 120 ntBASIC-1.94□□□□□ -2.72
NUP98P52948 MIR5683-201ENST00000636514 76 ntBASIC-1.94□□□□□ -2.72
NUP98P52948 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.95□□□□□ -2.72
NUP98P52948 RNU6-823P-201ENST00000391042 103 ntBASIC-1.95□□□□□ -2.72
NUP98P52948 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.95□□□□□ -2.72
NUP98P52948 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.95□□□□□ -2.72
NUP98P52948 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.95□□□□□ -2.72
NUP98P52948 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.95□□□□□ -2.72
NUP98P52948 U6.96-201ENST00000636425 70 ntBASIC-1.95□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 551.7 ms