Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RNU6-431P-201ENST00000383874 107 ntBASIC-1.15□□□□□ -2.59
RFC3P40938 SNORD101-201ENST00000384027 73 ntBASIC-1.15□□□□□ -2.59
RFC3P40938 SNORD64-201ENST00000386683 67 ntBASIC-1.15□□□□□ -2.59
RFC3P40938 MT-TI-201ENST00000387365 69 ntBASIC-1.15□□□□□ -2.59
RFC3P40938 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.15□□□□□ -2.59
RFC3P40938 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.15□□□□□ -2.59
RFC3P40938 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.16□□□□□ -2.6
RFC3P40938 RNU6-973P-201ENST00000364690 107 ntBASIC-1.16□□□□□ -2.6
RFC3P40938 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.16□□□□□ -2.6
RFC3P40938 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.16□□□□□ -2.6
RFC3P40938 MIR548G-201ENST00000408442 89 ntBASIC-1.16□□□□□ -2.6
RFC3P40938 RNU6-762P-201ENST00000517107 102 ntBASIC-1.16□□□□□ -2.6
RFC3P40938 RNU6-706P-201ENST00000517229 104 ntBASIC-1.16□□□□□ -2.6
RFC3P40938 MIR4696-201ENST00000581431 70 ntBASIC-1.16□□□□□ -2.6
RFC3P40938 AC044792.1-201ENST00000593294 196 ntBASIC-1.16□□□□□ -2.6
RFC3P40938 RNU6-90P-201ENST00000606352 106 ntBASIC-1.16□□□□□ -2.6
RFC3P40938 AC021753.1-201ENST00000635724 168 ntBASIC-1.16□□□□□ -2.6
RFC3P40938 MIR1255B1-201ENST00000636325 63 ntBASIC-1.16□□□□□ -2.6
RFC3P40938 RNU6-239P-201ENST00000390990 99 ntBASIC-1.17□□□□□ -2.6
RFC3P40938 RNU4-71P-201ENST00000516258 113 ntBASIC-1.17□□□□□ -2.6
RFC3P40938 RNU7-121P-201ENST00000516604 62 ntBASIC-1.17□□□□□ -2.6
RFC3P40938 RNU6-664P-201ENST00000362381 107 ntBASIC-1.18□□□□□ -2.6
RFC3P40938 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.18□□□□□ -2.6
RFC3P40938 RNU6-235P-201ENST00000362644 107 ntBASIC-1.18□□□□□ -2.6
RFC3P40938 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.18□□□□□ -2.6
RFC3P40938 SNORD38.1-201ENST00000363863 68 ntBASIC-1.18□□□□□ -2.6
RFC3P40938 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.18□□□□□ -2.6
RFC3P40938 MIR582-201ENST00000365731 98 ntBASIC-1.18□□□□□ -2.6
RFC3P40938 SNORD37.2-201ENST00000391075 66 ntBASIC-1.18□□□□□ -2.6
RFC3P40938 RNU6-466P-201ENST00000391224 103 ntBASIC-1.18□□□□□ -2.6
RFC3P40938 AC097510.1-201ENST00000510945 133 ntBASIC-1.18□□□□□ -2.6
RFC3P40938 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.18□□□□□ -2.6
RFC3P40938 MIR382-201ENST00000637119 76 ntBASIC-1.18□□□□□ -2.6
RFC3P40938 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.19□□□□□ -2.6
RFC3P40938 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.19□□□□□ -2.6
RFC3P40938 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.19□□□□□ -2.6
RFC3P40938 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.19□□□□□ -2.6
RFC3P40938 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.19□□□□□ -2.6
RFC3P40938 RNU6-476P-201ENST00000384726 107 ntBASIC-1.19□□□□□ -2.6
RFC3P40938 RNU6-935P-201ENST00000410371 100 ntBASIC-1.19□□□□□ -2.6
RFC3P40938 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.19□□□□□ -2.6
RFC3P40938 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.19□□□□□ -2.6
RFC3P40938 MIR6854-201ENST00000614935 69 ntBASIC-1.19□□□□□ -2.6
RFC3P40938 MIR8068-201ENST00000618032 68 ntBASIC-1.19□□□□□ -2.6
RFC3P40938 AL512310.12-203ENST00000640543 90 ntBASIC-1.19□□□□□ -2.6
RFC3P40938 SNORD74.6-201ENST00000364796 70 ntBASIC-1.2□□□□□ -2.6
RFC3P40938 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.2□□□□□ -2.6
RFC3P40938 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.2□□□□□ -2.6
RFC3P40938 SNORA7.5-201ENST00000410672 110 ntBASIC-1.2□□□□□ -2.6
RFC3P40938 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.2□□□□□ -2.6
RFC3P40938 DNAJC19P2-201ENST00000593340 302 ntBASIC-1.2□□□□□ -2.6
RFC3P40938 MIR3658-201ENST00000636291 56 ntBASIC-1.2□□□□□ -2.6
RFC3P40938 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.2□□□□□ -2.6
RFC3P40938 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.21□□□□□ -2.6
RFC3P40938 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.21□□□□□ -2.6
RFC3P40938 MIR759-201ENST00000390224 91 ntBASIC-1.21□□□□□ -2.6
RFC3P40938 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.21□□□□□ -2.6
RFC3P40938 MIR548E-201ENST00000408287 88 ntBASIC-1.21□□□□□ -2.6
RFC3P40938 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.21□□□□□ -2.6
RFC3P40938 SNORD114-4-201ENST00000363962 75 ntBASIC-1.22□□□□□ -2.6
RFC3P40938 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.22□□□□□ -2.6
RFC3P40938 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.22□□□□□ -2.6
RFC3P40938 AL117187.1-201ENST00000555482 181 ntBASIC-1.22□□□□□ -2.6
RFC3P40938 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.23□□□□□ -2.61
RFC3P40938 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.23□□□□□ -2.61
RFC3P40938 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.23□□□□□ -2.61
RFC3P40938 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.23□□□□□ -2.61
RFC3P40938 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.23□□□□□ -2.61
RFC3P40938 RNU6-54P-201ENST00000365563 107 ntBASIC-1.23□□□□□ -2.61
RFC3P40938 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.23□□□□□ -2.61
RFC3P40938 AC026421.1-201ENST00000519101 163 ntBASIC-1.23□□□□□ -2.61
RFC3P40938 AC130289.1-201ENST00000577321 73 ntBASIC-1.23□□□□□ -2.61
RFC3P40938 MIR3121-201ENST00000579680 77 ntBASIC-1.23□□□□□ -2.61
RFC3P40938 RNU6-363P-201ENST00000362895 105 ntBASIC-1.24□□□□□ -2.61
RFC3P40938 RNU6-226P-201ENST00000363778 107 ntBASIC-1.24□□□□□ -2.61
RFC3P40938 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.24□□□□□ -2.61
RFC3P40938 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.24□□□□□ -2.61
RFC3P40938 RNU6-905P-201ENST00000384434 107 ntBASIC-1.24□□□□□ -2.61
RFC3P40938 HLA-S-202ENST00000425174 53 ntBASIC-1.24□□□□□ -2.61
RFC3P40938 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.25□□□□□ -2.61
RFC3P40938 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.25□□□□□ -2.61
RFC3P40938 MIR147A-201ENST00000385079 72 ntBASIC-1.25□□□□□ -2.61
RFC3P40938 U3.27-201ENST00000391237 200 ntBASIC-1.25□□□□□ -2.61
RFC3P40938 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.25□□□□□ -2.61
RFC3P40938 snoR1.1-201ENST00000628177 80 ntBASIC-1.25□□□□□ -2.61
RFC3P40938 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.26□□□□□ -2.61
RFC3P40938 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.26□□□□□ -2.61
RFC3P40938 MIR548D2-201ENST00000384955 97 ntBASIC-1.26□□□□□ -2.61
RFC3P40938 MIR451A-201ENST00000385059 72 ntBASIC-1.26□□□□□ -2.61
RFC3P40938 MIR8485-201ENST00000401372 91 ntBASIC-1.26□□□□□ -2.61
RFC3P40938 SNORD18.2-201ENST00000459604 70 ntBASIC-1.26□□□□□ -2.61
RFC3P40938 AP002392.1-201ENST00000537692 208 ntBASIC-1.26□□□□□ -2.61
RFC3P40938 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.27□□□□□ -2.61
RFC3P40938 AL353813.1-201ENST00000440700 253 ntBASIC-1.27□□□□□ -2.61
RFC3P40938 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.28□□□□□ -2.61
RFC3P40938 RNA5SP136-201ENST00000410906 107 ntBASIC-1.28□□□□□ -2.61
RFC3P40938 snoU83B.1-201ENST00000517136 88 ntBASIC-1.28□□□□□ -2.61
RFC3P40938 AC138207.3-201ENST00000585289 166 ntBASIC-1.28□□□□□ -2.61
RFC3P40938 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.29□□□□□ -2.62
RFC3P40938 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms