Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
GRIK1P39086 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.76□□□□□ -2.13
GRIK1P39086 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.75□□□□□ -2.13
GRIK1P39086 AC048334.1-201ENST00000477975 159 ntBASIC1.75□□□□□ -2.13
GRIK1P39086 AC023827.1-201ENST00000569247 97 ntBASIC1.75□□□□□ -2.13
GRIK1P39086 AC069503.3-201ENST00000618674 145 ntBASIC1.75□□□□□ -2.13
GRIK1P39086 RNU6-369P-201ENST00000362515 102 ntBASIC1.74□□□□□ -2.13
GRIK1P39086 RNU6-1079P-201ENST00000362861 110 ntBASIC1.74□□□□□ -2.13
GRIK1P39086 Y_RNA.363-201ENST00000365529 113 ntBASIC1.74□□□□□ -2.13
GRIK1P39086 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
GRIK1P39086 AL691482.2-201ENST00000457453 84 ntBASIC1.74□□□□□ -2.13
GRIK1P39086 MIR4255-201ENST00000579351 72 ntBASIC1.74□□□□□ -2.13
GRIK1P39086 MIR4676-201ENST00000583078 72 ntBASIC1.74□□□□□ -2.13
GRIK1P39086 Y_RNA.236-201ENST00000364427 111 ntBASIC1.73□□□□□ -2.13
GRIK1P39086 SNORD113.3-201ENST00000364630 78 ntBASIC1.73□□□□□ -2.13
GRIK1P39086 MIR1287-201ENST00000408492 90 ntBASIC1.73□□□□□ -2.13
GRIK1P39086 RNU4-62P-201ENST00000410125 130 ntBASIC1.73□□□□□ -2.13
GRIK1P39086 MIR4303-201ENST00000581299 66 ntBASIC1.73□□□□□ -2.13
GRIK1P39086 AC092634.7-201ENST00000621022 103 ntBASIC1.73□□□□□ -2.13
GRIK1P39086 SNORD48-201ENST00000364953 64 ntBASIC1.72□□□□□ -2.13
GRIK1P39086 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.72□□□□□ -2.13
GRIK1P39086 AC244505.6-201ENST00000452829 130 ntBASIC1.72□□□□□ -2.13
GRIK1P39086 RNU7-102P-201ENST00000458948 62 ntBASIC1.72□□□□□ -2.13
GRIK1P39086 RNU6-752P-201ENST00000516376 102 ntBASIC1.72□□□□□ -2.13
GRIK1P39086 RNU6-1057P-201ENST00000517162 102 ntBASIC1.72□□□□□ -2.13
GRIK1P39086 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
GRIK1P39086 RNA5SP192-201ENST00000364404 120 ntBASIC1.71□□□□□ -2.14
GRIK1P39086 SNORA67.5-201ENST00000391036 107 ntBASIC1.71□□□□□ -2.14
GRIK1P39086 SNORD75.2-201ENST00000408784 58 ntBASIC1.71□□□□□ -2.14
GRIK1P39086 RPS26P5-201ENST00000418544 335 ntBASIC1.71□□□□□ -2.14
GRIK1P39086 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.7□□□□□ -2.14
GRIK1P39086 Y_RNA.32-201ENST00000362589 110 ntBASIC1.7□□□□□ -2.14
GRIK1P39086 RNU6-495P-201ENST00000362995 107 ntBASIC1.7□□□□□ -2.14
GRIK1P39086 RNU6-54P-201ENST00000365563 107 ntBASIC1.7□□□□□ -2.14
GRIK1P39086 RNU6-1039P-201ENST00000383931 107 ntBASIC1.7□□□□□ -2.14
GRIK1P39086 RNU6-321P-201ENST00000410912 106 ntBASIC1.7□□□□□ -2.14
GRIK1P39086 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
GRIK1P39086 RN7SKP88-201ENST00000516847 250 ntBASIC1.7□□□□□ -2.14
GRIK1P39086 SNORD53B-201ENST00000577887 78 ntBASIC1.7□□□□□ -2.14
GRIK1P39086 MIR3920-201ENST00000581751 86 ntBASIC1.7□□□□□ -2.14
GRIK1P39086 7SK.8-201ENST00000612110 250 ntBASIC1.7□□□□□ -2.14
GRIK1P39086 MIR6509-201ENST00000614603 85 ntBASIC1.7□□□□□ -2.14
GRIK1P39086 7SK.11-201ENST00000615477 250 ntBASIC1.7□□□□□ -2.14
GRIK1P39086 7SK.13-201ENST00000622040 250 ntBASIC1.7□□□□□ -2.14
GRIK1P39086 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
GRIK1P39086 RNU6-446P-201ENST00000362827 106 ntBASIC1.69□□□□□ -2.14
GRIK1P39086 RNU6-364P-201ENST00000384387 107 ntBASIC1.69□□□□□ -2.14
GRIK1P39086 U3.27-201ENST00000391237 200 ntBASIC1.69□□□□□ -2.14
GRIK1P39086 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.69□□□□□ -2.14
GRIK1P39086 SNORA31.14-201ENST00000516728 116 ntBASIC1.69□□□□□ -2.14
GRIK1P39086 SNORA40.17-201ENST00000517256 115 ntBASIC1.69□□□□□ -2.14
GRIK1P39086 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.69□□□□□ -2.14
GRIK1P39086 RNU6-668P-201ENST00000364180 107 ntBASIC1.68□□□□□ -2.14
GRIK1P39086 RNU6-1126P-201ENST00000384002 107 ntBASIC1.68□□□□□ -2.14
GRIK1P39086 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.68□□□□□ -2.14
GRIK1P39086 SNORD42B-201ENST00000458893 67 ntBASIC1.68□□□□□ -2.14
GRIK1P39086 RNU7-13P-201ENST00000516413 62 ntBASIC1.68□□□□□ -2.14
GRIK1P39086 RNU7-161P-201ENST00000517289 62 ntBASIC1.68□□□□□ -2.14
GRIK1P39086 AL359821.1-201ENST00000605519 182 ntBASIC1.68□□□□□ -2.14
GRIK1P39086 AL157834.3-201ENST00000615543 103 ntBASIC1.68□□□□□ -2.14
GRIK1P39086 AC027335.2-201ENST00000624030 375 ntBASIC1.68□□□□□ -2.14
GRIK1P39086 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.67□□□□□ -2.14
GRIK1P39086 Y_RNA.375-201ENST00000365625 101 ntBASIC1.67□□□□□ -2.14
GRIK1P39086 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
GRIK1P39086 AP1B1P2-201ENST00000416196 106 ntBASIC1.67□□□□□ -2.14
GRIK1P39086 MIR7978-201ENST00000636158 59 ntBASIC1.67□□□□□ -2.14
GRIK1P39086 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
GRIK1P39086 SNORD115-24-201ENST00000363528 82 ntBASIC1.66□□□□□ -2.14
GRIK1P39086 RNA5SP403-201ENST00000363598 108 ntBASIC1.66□□□□□ -2.14
GRIK1P39086 MIR938-201ENST00000401216 83 ntBASIC1.66□□□□□ -2.14
GRIK1P39086 MIR466-201ENST00000580653 84 ntBASIC1.66□□□□□ -2.14
GRIK1P39086 MIR4804-201ENST00000581683 73 ntBASIC1.66□□□□□ -2.14
GRIK1P39086 MIR3657-201ENST00000584818 117 ntBASIC1.66□□□□□ -2.14
GRIK1P39086 BX248123.2-201ENST00000606318 124 ntBASIC1.66□□□□□ -2.14
GRIK1P39086 AC106800.4-201ENST00000614905 153 ntBASIC1.66□□□□□ -2.14
GRIK1P39086 SNORA25.5-201ENST00000363782 126 ntBASIC1.65□□□□□ -2.15
GRIK1P39086 RNU1-42P-201ENST00000364033 160 ntBASIC1.65□□□□□ -2.15
GRIK1P39086 RNU6-645P-201ENST00000364649 106 ntBASIC1.65□□□□□ -2.15
GRIK1P39086 RNU6-997P-201ENST00000384725 107 ntBASIC1.65□□□□□ -2.15
GRIK1P39086 TRMT112P2-201ENST00000512910 132 ntBASIC1.65□□□□□ -2.15
GRIK1P39086 SNORA31.2-201ENST00000516019 134 ntBASIC1.65□□□□□ -2.15
GRIK1P39086 MIR7111-201ENST00000619751 72 ntBASIC1.65□□□□□ -2.15
GRIK1P39086 uc_338.16-201ENST00000621804 95 ntBASIC1.65□□□□□ -2.15
GRIK1P39086 RNU6-990P-201ENST00000364385 104 ntBASIC1.64□□□□□ -2.15
GRIK1P39086 SNORD113-4-201ENST00000364802 75 ntBASIC1.64□□□□□ -2.15
GRIK1P39086 SNORD115-44-201ENST00000365391 82 ntBASIC1.64□□□□□ -2.15
GRIK1P39086 SNORA67.6-201ENST00000391093 99 ntBASIC1.64□□□□□ -2.15
GRIK1P39086 MTND4LP1-201ENST00000446263 157 ntBASIC1.64□□□□□ -2.15
GRIK1P39086 RNU7-56P-201ENST00000458744 62 ntBASIC1.64□□□□□ -2.15
GRIK1P39086 RNU7-24P-201ENST00000458867 62 ntBASIC1.64□□□□□ -2.15
GRIK1P39086 RNA5SP147-201ENST00000516493 109 ntBASIC1.64□□□□□ -2.15
GRIK1P39086 AC073869.9-201ENST00000641610 120 ntBASIC1.64□□□□□ -2.15
GRIK1P39086 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
GRIK1P39086 MIR499A-201ENST00000384903 122 ntBASIC1.63□□□□□ -2.15
GRIK1P39086 MIR519E-201ENST00000385075 84 ntBASIC1.63□□□□□ -2.15
GRIK1P39086 MIR517C-201ENST00000385103 95 ntBASIC1.63□□□□□ -2.15
GRIK1P39086 RNU1-123P-201ENST00000458950 160 ntBASIC1.63□□□□□ -2.15
GRIK1P39086 RNU7-95P-201ENST00000459222 64 ntBASIC1.63□□□□□ -2.15
GRIK1P39086 RNU7-104P-201ENST00000459398 79 ntBASIC1.63□□□□□ -2.15
GRIK1P39086 RNU6-542P-201ENST00000516405 103 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 202.8 ms