Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.24□□□□□ -2.45
HOXA9P31269 RNU6-302P-201ENST00000365249 107 ntBASIC-0.24□□□□□ -2.45
HOXA9P31269 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.24□□□□□ -2.45
HOXA9P31269 MIR214-201ENST00000385214 110 ntBASIC-0.24□□□□□ -2.45
HOXA9P31269 MT-TY-201ENST00000387409 66 ntBASIC-0.24□□□□□ -2.45
HOXA9P31269 SNORA40-201ENST00000388090 126 ntBASIC-0.24□□□□□ -2.45
HOXA9P31269 RNU7-188P-201ENST00000517063 64 ntBASIC-0.24□□□□□ -2.45
HOXA9P31269 MIR4460-201ENST00000577862 86 ntBASIC-0.24□□□□□ -2.45
HOXA9P31269 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.25□□□□□ -2.45
HOXA9P31269 RNU6-46P-201ENST00000383860 107 ntBASIC-0.25□□□□□ -2.45
HOXA9P31269 MIR577-201ENST00000385196 96 ntBASIC-0.25□□□□□ -2.45
HOXA9P31269 AC109327.2-201ENST00000448339 378 ntBASIC-0.25□□□□□ -2.45
HOXA9P31269 RNU7-107P-201ENST00000459121 61 ntBASIC-0.25□□□□□ -2.45
HOXA9P31269 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.25□□□□□ -2.45
HOXA9P31269 MIR148A-201ENST00000362215 68 ntBASIC-0.26□□□□□ -2.45
HOXA9P31269 SNORD114-31-201ENST00000363219 75 ntBASIC-0.26□□□□□ -2.45
HOXA9P31269 SNORA18.1-201ENST00000363418 128 ntBASIC-0.26□□□□□ -2.45
HOXA9P31269 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.26□□□□□ -2.45
HOXA9P31269 SNORD114-12-201ENST00000365400 75 ntBASIC-0.26□□□□□ -2.45
HOXA9P31269 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.26□□□□□ -2.45
HOXA9P31269 SNORD4A-201ENST00000459174 72 ntBASIC-0.26□□□□□ -2.45
HOXA9P31269 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.26□□□□□ -2.45
HOXA9P31269 snoU13.11-201ENST00000459219 104 ntBASIC-0.26□□□□□ -2.45
HOXA9P31269 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.26□□□□□ -2.45
HOXA9P31269 MIR4696-201ENST00000581431 70 ntBASIC-0.26□□□□□ -2.45
HOXA9P31269 MIR6507-201ENST00000613630 70 ntBASIC-0.26□□□□□ -2.45
HOXA9P31269 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.26□□□□□ -2.45
HOXA9P31269 AL035470.1-201ENST00000622571 220 ntBASIC-0.26□□□□□ -2.45
HOXA9P31269 AL157777.2-201ENST00000258070 137 ntBASIC-0.27□□□□□ -2.45
HOXA9P31269 MIR655-201ENST00000362159 97 ntBASIC-0.27□□□□□ -2.45
HOXA9P31269 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.27□□□□□ -2.45
HOXA9P31269 RNU6-175P-201ENST00000516896 107 ntBASIC-0.27□□□□□ -2.45
HOXA9P31269 MIR4679-2-201ENST00000578358 77 ntBASIC-0.27□□□□□ -2.45
HOXA9P31269 MIR3613-201ENST00000579844 87 ntBASIC-0.27□□□□□ -2.45
HOXA9P31269 U8.6-201ENST00000364939 135 ntBASIC-0.28□□□□□ -2.45
HOXA9P31269 RNY1P5-201ENST00000383890 115 ntBASIC-0.28□□□□□ -2.45
HOXA9P31269 MIR1265-201ENST00000408444 86 ntBASIC-0.28□□□□□ -2.45
HOXA9P31269 HAR1A.1-201ENST00000459583 118 ntBASIC-0.28□□□□□ -2.45
HOXA9P31269 RNU6-971P-201ENST00000516920 106 ntBASIC-0.28□□□□□ -2.45
HOXA9P31269 RNU6-664P-201ENST00000362381 107 ntBASIC-0.29□□□□□ -2.46
HOXA9P31269 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.29□□□□□ -2.46
HOXA9P31269 SNORD101-201ENST00000384027 73 ntBASIC-0.29□□□□□ -2.46
HOXA9P31269 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.29□□□□□ -2.46
HOXA9P31269 AC244250.2-201ENST00000418731 148 ntBASIC-0.29□□□□□ -2.46
HOXA9P31269 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.29□□□□□ -2.46
HOXA9P31269 AC007012.1-201ENST00000567192 175 ntBASIC-0.29□□□□□ -2.46
HOXA9P31269 RNU6-86P-201ENST00000606534 107 ntBASIC-0.29□□□□□ -2.46
HOXA9P31269 RNU6-832P-201ENST00000363319 107 ntBASIC-0.3□□□□□ -2.46
HOXA9P31269 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.3□□□□□ -2.46
HOXA9P31269 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.3□□□□□ -2.46
HOXA9P31269 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.3□□□□□ -2.46
HOXA9P31269 MIR539-201ENST00000365690 78 ntBASIC-0.3□□□□□ -2.46
HOXA9P31269 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.3□□□□□ -2.46
HOXA9P31269 RNU6-154P-201ENST00000384306 106 ntBASIC-0.3□□□□□ -2.46
HOXA9P31269 RNU6-480P-201ENST00000384332 107 ntBASIC-0.3□□□□□ -2.46
HOXA9P31269 RNU6-466P-201ENST00000391224 103 ntBASIC-0.3□□□□□ -2.46
HOXA9P31269 MIR4694-201ENST00000578534 80 ntBASIC-0.3□□□□□ -2.46
HOXA9P31269 AC096720.1-201ENST00000604441 183 ntBASIC-0.3□□□□□ -2.46
HOXA9P31269 AC025521.1-201ENST00000621624 286 ntBASIC-0.3□□□□□ -2.46
HOXA9P31269 RNA5SP205-201ENST00000364653 136 ntBASIC-0.31□□□□□ -2.46
HOXA9P31269 SNORD49B-201ENST00000365172 72 ntBASIC-0.31□□□□□ -2.46
HOXA9P31269 RNU6-75P-201ENST00000515944 104 ntBASIC-0.31□□□□□ -2.46
HOXA9P31269 AC068339.1-201ENST00000526965 141 ntBASIC-0.31□□□□□ -2.46
HOXA9P31269 MIR3914-2-201ENST00000637339 95 ntBASIC-0.31□□□□□ -2.46
HOXA9P31269 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.32□□□□□ -2.46
HOXA9P31269 SNORD114-29-201ENST00000364819 70 ntBASIC-0.32□□□□□ -2.46
HOXA9P31269 RNU6-811P-201ENST00000384069 107 ntBASIC-0.32□□□□□ -2.46
HOXA9P31269 MIR652-201ENST00000385278 98 ntBASIC-0.32□□□□□ -2.46
HOXA9P31269 Z95118.1-201ENST00000421372 247 ntBASIC-0.32□□□□□ -2.46
HOXA9P31269 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.32□□□□□ -2.46
HOXA9P31269 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.32□□□□□ -2.46
HOXA9P31269 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.32□□□□□ -2.46
HOXA9P31269 AP001180.6-201ENST00000584918 159 ntBASIC-0.32□□□□□ -2.46
HOXA9P31269 MIR548O2-201ENST00000616090 70 ntBASIC-0.32□□□□□ -2.46
HOXA9P31269 RNY3P2-201ENST00000362918 102 ntBASIC-0.33□□□□□ -2.46
HOXA9P31269 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.33□□□□□ -2.46
HOXA9P31269 RNU6-80P-201ENST00000384195 107 ntBASIC-0.33□□□□□ -2.46
HOXA9P31269 MIR548A1-201ENST00000385041 97 ntBASIC-0.33□□□□□ -2.46
HOXA9P31269 RNU6-907P-201ENST00000390924 102 ntBASIC-0.33□□□□□ -2.46
HOXA9P31269 MIR3666-201ENST00000607845 111 ntBASIC-0.33□□□□□ -2.46
HOXA9P31269 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.33□□□□□ -2.46
HOXA9P31269 SNORD50.2-201ENST00000365465 70 ntBASIC-0.34□□□□□ -2.46
HOXA9P31269 SNORD33.1-201ENST00000516213 88 ntBASIC-0.34□□□□□ -2.46
HOXA9P31269 RNU6-659P-201ENST00000516454 104 ntBASIC-0.34□□□□□ -2.46
HOXA9P31269 MIR4645-201ENST00000583158 77 ntBASIC-0.34□□□□□ -2.46
HOXA9P31269 RNA5SP98-201ENST00000363158 137 ntBASIC-0.35□□□□□ -2.47
HOXA9P31269 RNA5SP300-201ENST00000391197 107 ntBASIC-0.35□□□□□ -2.47
HOXA9P31269 RNU6-935P-201ENST00000410371 100 ntBASIC-0.35□□□□□ -2.47
HOXA9P31269 RNU7-85P-201ENST00000458851 63 ntBASIC-0.35□□□□□ -2.47
HOXA9P31269 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.35□□□□□ -2.47
HOXA9P31269 AL513043.2-201ENST00000573941 143 ntBASIC-0.35□□□□□ -2.47
HOXA9P31269 MIR5009-201ENST00000578736 100 ntBASIC-0.35□□□□□ -2.47
HOXA9P31269 MIR4493-201ENST00000584016 73 ntBASIC-0.35□□□□□ -2.47
HOXA9P31269 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.35□□□□□ -2.47
HOXA9P31269 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.36□□□□□ -2.47
HOXA9P31269 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.36□□□□□ -2.47
HOXA9P31269 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.36□□□□□ -2.47
HOXA9P31269 MIR548I1-201ENST00000408810 149 ntBASIC-0.36□□□□□ -2.47
HOXA9P31269 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.36□□□□□ -2.47
HOXA9P31269 MIR20A-201ENST00000362279 71 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 212 ms