Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RNU6-369P-201ENST00000362515 102 ntBASIC1.78□□□□□ -2.12
RXRBP28702 RNA5SP245-201ENST00000364239 121 ntBASIC1.78□□□□□ -2.12
RXRBP28702 SNORD113.3-201ENST00000364630 78 ntBASIC1.78□□□□□ -2.12
RXRBP28702 RNU6-934P-201ENST00000365154 107 ntBASIC1.78□□□□□ -2.12
RXRBP28702 SNORA24B-201ENST00000384176 131 ntBASIC1.78□□□□□ -2.12
RXRBP28702 RNU6-540P-201ENST00000384622 101 ntBASIC1.78□□□□□ -2.12
RXRBP28702 AC097635.1-201ENST00000450678 155 ntBASIC1.78□□□□□ -2.12
RXRBP28702 RNU6-871P-201ENST00000516122 100 ntBASIC1.78□□□□□ -2.12
RXRBP28702 RNU6-1265P-201ENST00000516342 103 ntBASIC1.78□□□□□ -2.12
RXRBP28702 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
RXRBP28702 Y_RNA.239-201ENST00000364444 113 ntBASIC1.77□□□□□ -2.13
RXRBP28702 SNORD101-201ENST00000384027 73 ntBASIC1.77□□□□□ -2.13
RXRBP28702 RNU6-154P-201ENST00000384306 106 ntBASIC1.77□□□□□ -2.13
RXRBP28702 RNU6-291P-201ENST00000384720 107 ntBASIC1.77□□□□□ -2.13
RXRBP28702 MIR942-201ENST00000401111 86 ntBASIC1.77□□□□□ -2.13
RXRBP28702 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.77□□□□□ -2.13
RXRBP28702 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.77□□□□□ -2.13
RXRBP28702 RNU6-340P-201ENST00000364005 107 ntBASIC1.76□□□□□ -2.13
RXRBP28702 SNORD115-31-201ENST00000365318 82 ntBASIC1.76□□□□□ -2.13
RXRBP28702 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
RXRBP28702 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
RXRBP28702 Y_RNA.596-201ENST00000410462 109 ntBASIC1.76□□□□□ -2.13
RXRBP28702 RPS27P16-201ENST00000425758 201 ntBASIC1.76□□□□□ -2.13
RXRBP28702 MIR4771-2-201ENST00000577758 74 ntBASIC1.76□□□□□ -2.13
RXRBP28702 MIR4771-1-201ENST00000582617 74 ntBASIC1.76□□□□□ -2.13
RXRBP28702 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.76□□□□□ -2.13
RXRBP28702 RNU6-1241P-201ENST00000384536 107 ntBASIC1.75□□□□□ -2.13
RXRBP28702 MIR599-201ENST00000385069 95 ntBASIC1.75□□□□□ -2.13
RXRBP28702 RNU7-40P-201ENST00000516397 64 ntBASIC1.75□□□□□ -2.13
RXRBP28702 RNU6-902P-201ENST00000517212 91 ntBASIC1.75□□□□□ -2.13
RXRBP28702 MIR3937-201ENST00000580135 106 ntBASIC1.75□□□□□ -2.13
RXRBP28702 AL590095.2-201ENST00000604136 117 ntBASIC1.75□□□□□ -2.13
RXRBP28702 Y_RNA.330-201ENST00000365230 109 ntBASIC1.74□□□□□ -2.13
RXRBP28702 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
RXRBP28702 RNU7-156P-201ENST00000517214 74 ntBASIC1.74□□□□□ -2.13
RXRBP28702 AC106800.4-201ENST00000614905 153 ntBASIC1.74□□□□□ -2.13
RXRBP28702 Y_RNA.371-201ENST00000365591 113 ntBASIC1.73□□□□□ -2.13
RXRBP28702 Y_RNA.606-201ENST00000410579 103 ntBASIC1.73□□□□□ -2.13
RXRBP28702 RPS26P5-201ENST00000418544 335 ntBASIC1.73□□□□□ -2.13
RXRBP28702 AC138907.6-201ENST00000568401 126 ntBASIC1.73□□□□□ -2.13
RXRBP28702 AC138869.1-201ENST00000568623 124 ntBASIC1.73□□□□□ -2.13
RXRBP28702 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RXRBP28702 RNU6-824P-201ENST00000363724 104 ntBASIC1.72□□□□□ -2.13
RXRBP28702 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.72□□□□□ -2.13
RXRBP28702 MIR4676-201ENST00000583078 72 ntBASIC1.72□□□□□ -2.13
RXRBP28702 SNORA31.2-201ENST00000516019 134 ntBASIC1.71□□□□□ -2.14
RXRBP28702 AC023827.1-201ENST00000569247 97 ntBASIC1.71□□□□□ -2.14
RXRBP28702 SNORD111-201ENST00000408139 94 ntBASIC1.7□□□□□ -2.14
RXRBP28702 RNU6-935P-201ENST00000410371 100 ntBASIC1.7□□□□□ -2.14
RXRBP28702 AC008608.1-201ENST00000603910 127 ntBASIC1.7□□□□□ -2.14
RXRBP28702 U6.81-201ENST00000612550 106 ntBASIC1.7□□□□□ -2.14
RXRBP28702 RNY4P3-201ENST00000365254 95 ntBASIC1.69□□□□□ -2.14
RXRBP28702 Y_RNA.340-201ENST00000365330 92 ntBASIC1.69□□□□□ -2.14
RXRBP28702 SNORA8.1-201ENST00000384250 140 ntBASIC1.69□□□□□ -2.14
RXRBP28702 RNU6-649P-201ENST00000384463 107 ntBASIC1.69□□□□□ -2.14
RXRBP28702 RNU6-535P-201ENST00000384722 107 ntBASIC1.69□□□□□ -2.14
RXRBP28702 RNU2-59P-201ENST00000410482 191 ntBASIC1.69□□□□□ -2.14
RXRBP28702 RNU6-1052P-201ENST00000411398 104 ntBASIC1.69□□□□□ -2.14
RXRBP28702 AC244505.6-201ENST00000452829 130 ntBASIC1.69□□□□□ -2.14
RXRBP28702 RNU7-21P-201ENST00000459430 62 ntBASIC1.69□□□□□ -2.14
RXRBP28702 AC097510.1-201ENST00000510945 133 ntBASIC1.69□□□□□ -2.14
RXRBP28702 RNA5SP121-201ENST00000516537 101 ntBASIC1.69□□□□□ -2.14
RXRBP28702 RNU6-719P-201ENST00000516671 104 ntBASIC1.69□□□□□ -2.14
RXRBP28702 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RXRBP28702 RNA5SP257-201ENST00000363023 116 ntBASIC1.68□□□□□ -2.14
RXRBP28702 MIR451A-201ENST00000385059 72 ntBASIC1.68□□□□□ -2.14
RXRBP28702 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
RXRBP28702 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.68□□□□□ -2.14
RXRBP28702 RNU7-102P-201ENST00000458948 62 ntBASIC1.68□□□□□ -2.14
RXRBP28702 AC087343.1-201ENST00000477341 475 ntBASIC1.68□□□□□ -2.14
RXRBP28702 RN7SKP88-201ENST00000516847 250 ntBASIC1.68□□□□□ -2.14
RXRBP28702 MIR4295-201ENST00000585286 85 ntBASIC1.68□□□□□ -2.14
RXRBP28702 7SK.8-201ENST00000612110 250 ntBASIC1.68□□□□□ -2.14
RXRBP28702 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
RXRBP28702 7SK.11-201ENST00000615477 250 ntBASIC1.68□□□□□ -2.14
RXRBP28702 7SK.13-201ENST00000622040 250 ntBASIC1.68□□□□□ -2.14
RXRBP28702 U6.111-201ENST00000636093 83 ntBASIC1.68□□□□□ -2.14
RXRBP28702 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RXRBP28702 Y_RNA.258-201ENST00000364613 105 ntBASIC1.67□□□□□ -2.14
RXRBP28702 MIR4804-201ENST00000581683 73 ntBASIC1.67□□□□□ -2.14
RXRBP28702 AL109933.3-201ENST00000619095 188 ntBASIC1.67□□□□□ -2.14
RXRBP28702 RNU6-800P-201ENST00000384473 103 ntBASIC1.66□□□□□ -2.14
RXRBP28702 RNU6-997P-201ENST00000384725 107 ntBASIC1.66□□□□□ -2.14
RXRBP28702 MIR154-201ENST00000385243 84 ntBASIC1.66□□□□□ -2.14
RXRBP28702 RNU7-56P-201ENST00000458744 62 ntBASIC1.66□□□□□ -2.14
RXRBP28702 AC125388.1-201ENST00000459631 156 ntBASIC1.66□□□□□ -2.14
RXRBP28702 RNA5SP330-201ENST00000517096 96 ntBASIC1.66□□□□□ -2.14
RXRBP28702 AC027335.2-201ENST00000624030 375 ntBASIC1.66□□□□□ -2.14
RXRBP28702 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
RXRBP28702 SNORD30.1-201ENST00000391309 70 ntBASIC1.65□□□□□ -2.15
RXRBP28702 MIR938-201ENST00000401216 83 ntBASIC1.65□□□□□ -2.15
RXRBP28702 RNU6-287P-201ENST00000516230 98 ntBASIC1.65□□□□□ -2.15
RXRBP28702 MIR3675-201ENST00000583661 73 ntBASIC1.65□□□□□ -2.15
RXRBP28702 AC211469.2-201ENST00000605461 205 ntBASIC1.65□□□□□ -2.15
RXRBP28702 MIR924-201ENST00000638017 53 ntBASIC1.65□□□□□ -2.15
RXRBP28702 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
RXRBP28702 MIR373-201ENST00000362273 69 ntBASIC1.64□□□□□ -2.15
RXRBP28702 RNA5SP62-201ENST00000363457 110 ntBASIC1.64□□□□□ -2.15
RXRBP28702 RNU6-663P-201ENST00000391105 106 ntBASIC1.64□□□□□ -2.15
RXRBP28702 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 264.9 ms