Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 RNU7-85P-201ENST00000458851 63 ntBASIC-0.04□□□□□ -2.42
RPA1P27694 RNU6-795P-201ENST00000516323 103 ntBASIC-0.04□□□□□ -2.42
RPA1P27694 MIR4694-201ENST00000578534 80 ntBASIC-0.04□□□□□ -2.42
RPA1P27694 MIR4696-201ENST00000581431 70 ntBASIC-0.04□□□□□ -2.42
RPA1P27694 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.04□□□□□ -2.42
RPA1P27694 RNY3P2-201ENST00000362918 102 ntBASIC-0.05□□□□□ -2.42
RPA1P27694 RNU6-959P-201ENST00000384671 107 ntBASIC-0.05□□□□□ -2.42
RPA1P27694 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.05□□□□□ -2.42
RPA1P27694 MIR548A3-201ENST00000385297 97 ntBASIC-0.05□□□□□ -2.42
RPA1P27694 RNA5SP163-201ENST00000410304 99 ntBASIC-0.05□□□□□ -2.42
RPA1P27694 AC141557.1-201ENST00000540982 400 ntBASIC-0.05□□□□□ -2.42
RPA1P27694 YWHAEP2-201ENST00000580066 112 ntBASIC-0.05□□□□□ -2.42
RPA1P27694 MIR4777-201ENST00000583710 86 ntBASIC-0.05□□□□□ -2.42
RPA1P27694 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.05□□□□□ -2.42
RPA1P27694 AC012531.4-201ENST00000616509 177 ntBASIC-0.05□□□□□ -2.42
RPA1P27694 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.05□□□□□ -2.42
RPA1P27694 AC073869.9-201ENST00000641610 120 ntBASIC-0.05□□□□□ -2.42
RPA1P27694 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.06□□□□□ -2.42
RPA1P27694 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.06□□□□□ -2.42
RPA1P27694 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.06□□□□□ -2.42
RPA1P27694 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.06□□□□□ -2.42
RPA1P27694 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.06□□□□□ -2.42
RPA1P27694 MIR516B1-201ENST00000385211 90 ntBASIC-0.06□□□□□ -2.42
RPA1P27694 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.06□□□□□ -2.42
RPA1P27694 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.06□□□□□ -2.42
RPA1P27694 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.06□□□□□ -2.42
RPA1P27694 AL513043.2-201ENST00000573941 143 ntBASIC-0.06□□□□□ -2.42
RPA1P27694 RNU6-509P-201ENST00000363519 107 ntBASIC-0.07□□□□□ -2.42
RPA1P27694 MIR7-2-201ENST00000384970 110 ntBASIC-0.07□□□□□ -2.42
RPA1P27694 MIR610-201ENST00000385139 96 ntBASIC-0.07□□□□□ -2.42
RPA1P27694 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.07□□□□□ -2.42
RPA1P27694 SNORA25.13-201ENST00000516395 103 ntBASIC-0.07□□□□□ -2.42
RPA1P27694 MIR5190-201ENST00000581537 80 ntBASIC-0.07□□□□□ -2.42
RPA1P27694 MIR4743-201ENST00000584576 69 ntBASIC-0.07□□□□□ -2.42
RPA1P27694 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.08□□□□□ -2.42
RPA1P27694 RNU6-132P-201ENST00000383863 107 ntBASIC-0.08□□□□□ -2.42
RPA1P27694 RNU6-180P-201ENST00000516697 61 ntBASIC-0.08□□□□□ -2.42
RPA1P27694 AL670379.3-201ENST00000605040 251 ntBASIC-0.08□□□□□ -2.42
RPA1P27694 AC103810.7-201ENST00000607821 91 ntBASIC-0.08□□□□□ -2.42
RPA1P27694 RNU6-664P-201ENST00000362381 107 ntBASIC-0.09□□□□□ -2.42
RPA1P27694 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.09□□□□□ -2.42
RPA1P27694 RNU6-81P-201ENST00000365608 104 ntBASIC-0.09□□□□□ -2.42
RPA1P27694 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.09□□□□□ -2.42
RPA1P27694 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
RPA1P27694 MIR876-201ENST00000401147 81 ntBASIC-0.09□□□□□ -2.42
RPA1P27694 RNU7-165P-201ENST00000458864 60 ntBASIC-0.09□□□□□ -2.42
RPA1P27694 RNU6-175P-201ENST00000516896 107 ntBASIC-0.09□□□□□ -2.42
RPA1P27694 RNU7-188P-201ENST00000517063 64 ntBASIC-0.09□□□□□ -2.42
RPA1P27694 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.09□□□□□ -2.42
RPA1P27694 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.09□□□□□ -2.42
RPA1P27694 U6.95-201ENST00000636931 70 ntBASIC-0.09□□□□□ -2.42
RPA1P27694 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.1□□□□□ -2.43
RPA1P27694 SNORD101-201ENST00000384027 73 ntBASIC-0.1□□□□□ -2.43
RPA1P27694 SNORD116-21-201ENST00000384507 92 ntBASIC-0.1□□□□□ -2.43
RPA1P27694 MT-TY-201ENST00000387409 66 ntBASIC-0.1□□□□□ -2.43
RPA1P27694 SNORD90-201ENST00000391145 111 ntBASIC-0.1□□□□□ -2.43
RPA1P27694 MIR6129-201ENST00000616087 109 ntBASIC-0.1□□□□□ -2.43
RPA1P27694 MIR2909-201ENST00000617113 69 ntBASIC-0.1□□□□□ -2.43
RPA1P27694 AC069503.3-201ENST00000618674 145 ntBASIC-0.1□□□□□ -2.43
RPA1P27694 MIR6514-201ENST00000622549 70 ntBASIC-0.1□□□□□ -2.43
RPA1P27694 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.11□□□□□ -2.43
RPA1P27694 SNORD115-44-201ENST00000365391 82 ntBASIC-0.11□□□□□ -2.43
RPA1P27694 RNU6-652P-201ENST00000365488 107 ntBASIC-0.11□□□□□ -2.43
RPA1P27694 SNORA19-201ENST00000384737 128 ntBASIC-0.11□□□□□ -2.43
RPA1P27694 MIR892B-201ENST00000401279 77 ntBASIC-0.11□□□□□ -2.43
RPA1P27694 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.11□□□□□ -2.43
RPA1P27694 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.11□□□□□ -2.43
RPA1P27694 RNU6-719P-201ENST00000516671 104 ntBASIC-0.11□□□□□ -2.43
RPA1P27694 RNU6-537P-201ENST00000517277 103 ntBASIC-0.11□□□□□ -2.43
RPA1P27694 MIR4460-201ENST00000577862 86 ntBASIC-0.11□□□□□ -2.43
RPA1P27694 AL109933.3-201ENST00000619095 188 ntBASIC-0.11□□□□□ -2.43
RPA1P27694 AC084368.1-201ENST00000620935 65 ntBASIC-0.11□□□□□ -2.43
RPA1P27694 RNU6V-201ENST00000384105 107 ntBASIC-0.12□□□□□ -2.43
RPA1P27694 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.12□□□□□ -2.43
RPA1P27694 RNU6-54P-201ENST00000365563 107 ntBASIC-0.13□□□□□ -2.43
RPA1P27694 MIR652-201ENST00000385278 98 ntBASIC-0.13□□□□□ -2.43
RPA1P27694 RNU6-466P-201ENST00000391224 103 ntBASIC-0.13□□□□□ -2.43
RPA1P27694 MIR548M-201ENST00000408260 86 ntBASIC-0.13□□□□□ -2.43
RPA1P27694 RNU6-109P-201ENST00000516364 107 ntBASIC-0.13□□□□□ -2.43
RPA1P27694 RNU6-184P-201ENST00000516514 107 ntBASIC-0.13□□□□□ -2.43
RPA1P27694 AC096720.1-201ENST00000604441 183 ntBASIC-0.13□□□□□ -2.43
RPA1P27694 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.14□□□□□ -2.43
RPA1P27694 RNU6-480P-201ENST00000384332 107 ntBASIC-0.14□□□□□ -2.43
RPA1P27694 MIR590-201ENST00000385008 97 ntBASIC-0.14□□□□□ -2.43
RPA1P27694 SNORD42B-201ENST00000458893 67 ntBASIC-0.14□□□□□ -2.43
RPA1P27694 AC097510.1-201ENST00000510945 133 ntBASIC-0.14□□□□□ -2.43
RPA1P27694 RNU6-904P-201ENST00000516206 101 ntBASIC-0.14□□□□□ -2.43
RPA1P27694 RNU6-762P-201ENST00000517107 102 ntBASIC-0.14□□□□□ -2.43
RPA1P27694 MIR3910-1-201ENST00000580936 111 ntBASIC-0.14□□□□□ -2.43
RPA1P27694 MIR3140-201ENST00000583685 90 ntBASIC-0.14□□□□□ -2.43
RPA1P27694 MIR6507-201ENST00000613630 70 ntBASIC-0.14□□□□□ -2.43
RPA1P27694 MIR1295B-201ENST00000636144 60 ntBASIC-0.14□□□□□ -2.43
RPA1P27694 SNORA32.1-201ENST00000364514 115 ntBASIC-0.15□□□□□ -2.43
RPA1P27694 RNU6-302P-201ENST00000365249 107 ntBASIC-0.15□□□□□ -2.43
RPA1P27694 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.15□□□□□ -2.43
RPA1P27694 RNU6-154P-201ENST00000384306 106 ntBASIC-0.15□□□□□ -2.43
RPA1P27694 RNU6-880P-201ENST00000384526 107 ntBASIC-0.15□□□□□ -2.43
RPA1P27694 RNU6-813P-201ENST00000384691 107 ntBASIC-0.15□□□□□ -2.43
RPA1P27694 RNA5SP292-201ENST00000390974 118 ntBASIC-0.15□□□□□ -2.43
RPA1P27694 RNU6-554P-201ENST00000410466 106 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms