Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 uc_338.16-201ENST00000621804 95 ntBASIC2□□□□□ -2.09
VARSP26640 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VARSP26640 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VARSP26640 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VARSP26640 RNA5SP403-201ENST00000363598 108 ntBASIC1.99□□□□□ -2.09
VARSP26640 RNU6-668P-201ENST00000364180 107 ntBASIC1.99□□□□□ -2.09
VARSP26640 Y_RNA.338-201ENST00000365320 114 ntBASIC1.99□□□□□ -2.09
VARSP26640 RNU7-24P-201ENST00000458867 62 ntBASIC1.99□□□□□ -2.09
VARSP26640 MIR3920-201ENST00000581751 86 ntBASIC1.99□□□□□ -2.09
VARSP26640 MIR4422-201ENST00000581938 83 ntBASIC1.99□□□□□ -2.09
VARSP26640 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
VARSP26640 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
VARSP26640 RNU6-669P-201ENST00000365575 107 ntBASIC1.98□□□□□ -2.09
VARSP26640 MIR583-201ENST00000384846 75 ntBASIC1.98□□□□□ -2.09
VARSP26640 MIR216B-201ENST00000390186 82 ntBASIC1.98□□□□□ -2.09
VARSP26640 SUMO2P12-201ENST00000405924 140 ntBASIC1.98□□□□□ -2.09
VARSP26640 RNA5SP247-201ENST00000411181 105 ntBASIC1.98□□□□□ -2.09
VARSP26640 RNU7-161P-201ENST00000517289 62 ntBASIC1.98□□□□□ -2.09
VARSP26640 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
VARSP26640 MIR1-1-201ENST00000362147 71 ntBASIC1.97□□□□□ -2.09
VARSP26640 RNU6-614P-201ENST00000384369 107 ntBASIC1.97□□□□□ -2.09
VARSP26640 SNORA80D-201ENST00000384488 135 ntBASIC1.97□□□□□ -2.09
VARSP26640 MIR520F-201ENST00000384824 87 ntBASIC1.97□□□□□ -2.09
VARSP26640 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
VARSP26640 RNU6-910P-201ENST00000390844 107 ntBASIC1.97□□□□□ -2.09
VARSP26640 RNU7-90P-201ENST00000459216 62 ntBASIC1.97□□□□□ -2.09
VARSP26640 RNU7-104P-201ENST00000459398 79 ntBASIC1.97□□□□□ -2.09
VARSP26640 U6.59-201ENST00000615686 107 ntBASIC1.97□□□□□ -2.09
VARSP26640 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VARSP26640 Y_RNA.174-201ENST00000363781 105 ntBASIC1.96□□□□□ -2.1
VARSP26640 RNU1-78P-201ENST00000391248 165 ntBASIC1.96□□□□□ -2.1
VARSP26640 RNU6-141P-201ENST00000410499 105 ntBASIC1.96□□□□□ -2.1
VARSP26640 MIR617-201ENST00000385030 97 ntBASIC1.95□□□□□ -2.1
VARSP26640 AL359821.1-201ENST00000605519 182 ntBASIC1.95□□□□□ -2.1
VARSP26640 RNU6-54P-201ENST00000365563 107 ntBASIC1.94□□□□□ -2.1
VARSP26640 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.94□□□□□ -2.1
VARSP26640 AC079150.2-201ENST00000443733 78 ntBASIC1.94□□□□□ -2.1
VARSP26640 AC067940.1-201ENST00000458411 300 ntBASIC1.94□□□□□ -2.1
VARSP26640 MIR548O2-201ENST00000616090 70 ntBASIC1.94□□□□□ -2.1
VARSP26640 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.94□□□□□ -2.1
VARSP26640 MIR519E-201ENST00000385075 84 ntBASIC1.93□□□□□ -2.1
VARSP26640 MIR4285-201ENST00000581001 85 ntBASIC1.93□□□□□ -2.1
VARSP26640 AC073869.9-201ENST00000641610 120 ntBASIC1.93□□□□□ -2.1
VARSP26640 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.92□□□□□ -2.1
VARSP26640 RNU6-1053P-201ENST00000515930 101 ntBASIC1.92□□□□□ -2.1
VARSP26640 RNU6-542P-201ENST00000516405 103 ntBASIC1.92□□□□□ -2.1
VARSP26640 MIR4498-201ENST00000577599 66 ntBASIC1.92□□□□□ -2.1
VARSP26640 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
VARSP26640 RNU1-123P-201ENST00000458950 160 ntBASIC1.91□□□□□ -2.1
VARSP26640 SNORD79.1-201ENST00000516069 84 ntBASIC1.91□□□□□ -2.1
VARSP26640 MIR3657-201ENST00000584818 117 ntBASIC1.91□□□□□ -2.1
VARSP26640 AL136317.1-201ENST00000612653 226 ntBASIC1.91□□□□□ -2.1
VARSP26640 AC092634.7-201ENST00000621022 103 ntBASIC1.91□□□□□ -2.1
VARSP26640 AC067863.3-201ENST00000624172 122 ntBASIC1.91□□□□□ -2.1
VARSP26640 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.91□□□□□ -2.1
VARSP26640 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
VARSP26640 RNU6-645P-201ENST00000364649 106 ntBASIC1.89□□□□□ -2.11
VARSP26640 Y_RNA.375-201ENST00000365625 101 ntBASIC1.89□□□□□ -2.11
VARSP26640 RNU6-260P-201ENST00000384092 107 ntBASIC1.88□□□□□ -2.11
VARSP26640 RNU6V-201ENST00000384105 107 ntBASIC1.88□□□□□ -2.11
VARSP26640 SNORD42B-201ENST00000458893 67 ntBASIC1.88□□□□□ -2.11
VARSP26640 MIR3122-201ENST00000577243 73 ntBASIC1.88□□□□□ -2.11
VARSP26640 MIR4781-201ENST00000585250 76 ntBASIC1.88□□□□□ -2.11
VARSP26640 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
VARSP26640 MIR644A-201ENST00000385262 94 ntBASIC1.87□□□□□ -2.11
VARSP26640 MIR1827-201ENST00000408549 66 ntBASIC1.87□□□□□ -2.11
VARSP26640 RNU6-902P-201ENST00000517212 91 ntBASIC1.87□□□□□ -2.11
VARSP26640 MIR6845-201ENST00000613182 61 ntBASIC1.87□□□□□ -2.11
VARSP26640 RMST_2.1-201ENST00000617263 136 ntBASIC1.87□□□□□ -2.11
VARSP26640 RNU1-17P-201ENST00000363022 152 ntBASIC1.86□□□□□ -2.11
VARSP26640 Y_RNA.164-201ENST00000363709 102 ntBASIC1.85□□□□□ -2.11
VARSP26640 SNORA25.5-201ENST00000363782 126 ntBASIC1.85□□□□□ -2.11
VARSP26640 RNA5SP192-201ENST00000364404 120 ntBASIC1.85□□□□□ -2.11
VARSP26640 RNA5SP117-201ENST00000365294 118 ntBASIC1.85□□□□□ -2.11
VARSP26640 SNORA70.22-201ENST00000517160 124 ntBASIC1.85□□□□□ -2.11
VARSP26640 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.85□□□□□ -2.11
VARSP26640 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.85□□□□□ -2.11
VARSP26640 RNU6-1079P-201ENST00000362861 110 ntBASIC1.84□□□□□ -2.11
VARSP26640 RNU6-829P-201ENST00000363700 112 ntBASIC1.84□□□□□ -2.11
VARSP26640 MIR7-2-201ENST00000384970 110 ntBASIC1.84□□□□□ -2.11
VARSP26640 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.84□□□□□ -2.11
VARSP26640 RNA5SP147-201ENST00000516493 109 ntBASIC1.84□□□□□ -2.11
VARSP26640 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
VARSP26640 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
VARSP26640 AC002350.1-201ENST00000490759 375 ntBASIC1.83□□□□□ -2.12
VARSP26640 MIR466-201ENST00000580653 84 ntBASIC1.83□□□□□ -2.12
VARSP26640 snoU13.31-201ENST00000607291 104 ntBASIC1.83□□□□□ -2.12
VARSP26640 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.82□□□□□ -2.12
VARSP26640 AC003989.2-201ENST00000440224 169 ntBASIC1.82□□□□□ -2.12
VARSP26640 RNU7-74P-201ENST00000459104 62 ntBASIC1.82□□□□□ -2.12
VARSP26640 MIR378A-201ENST00000362177 66 ntBASIC1.81□□□□□ -2.12
VARSP26640 Y_RNA.226-201ENST00000364337 114 ntBASIC1.81□□□□□ -2.12
VARSP26640 RNU6-990P-201ENST00000364385 104 ntBASIC1.81□□□□□ -2.12
VARSP26640 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
VARSP26640 SNORA67.5-201ENST00000391036 107 ntBASIC1.81□□□□□ -2.12
VARSP26640 MIR548L-201ENST00000408303 86 ntBASIC1.81□□□□□ -2.12
VARSP26640 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.81□□□□□ -2.12
VARSP26640 AC244669.1-204ENST00000621564 178 ntBASIC1.81□□□□□ -2.12
VARSP26640 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.8□□□□□ -2.12
VARSP26640 SNORA2.1-201ENST00000363089 137 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms