Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.96□□□□□ -2.56
USF1P22415 SNORD101-201ENST00000384027 73 ntBASIC-0.96□□□□□ -2.56
USF1P22415 SNORD37.2-201ENST00000391075 66 ntBASIC-0.96□□□□□ -2.56
USF1P22415 SNORD2-201ENST00000459163 69 ntBASIC-0.96□□□□□ -2.56
USF1P22415 RNU4-71P-201ENST00000516258 113 ntBASIC-0.96□□□□□ -2.56
USF1P22415 MIR8068-201ENST00000618032 68 ntBASIC-0.96□□□□□ -2.56
USF1P22415 MIR1255B1-201ENST00000636325 63 ntBASIC-0.96□□□□□ -2.56
USF1P22415 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.97□□□□□ -2.56
USF1P22415 RNU6-54P-201ENST00000365563 107 ntBASIC-0.97□□□□□ -2.56
USF1P22415 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.97□□□□□ -2.56
USF1P22415 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.97□□□□□ -2.56
USF1P22415 MIR517B-201ENST00000385102 67 ntBASIC-0.97□□□□□ -2.56
USF1P22415 RNU6-274P-201ENST00000459566 107 ntBASIC-0.97□□□□□ -2.56
USF1P22415 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.97□□□□□ -2.56
USF1P22415 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.98□□□□□ -2.57
USF1P22415 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.98□□□□□ -2.57
USF1P22415 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.98□□□□□ -2.57
USF1P22415 RNU6-431P-201ENST00000383874 107 ntBASIC-0.98□□□□□ -2.57
USF1P22415 SNORD64-201ENST00000386683 67 ntBASIC-0.98□□□□□ -2.57
USF1P22415 RNU6-239P-201ENST00000390990 99 ntBASIC-0.98□□□□□ -2.57
USF1P22415 RNU6-935P-201ENST00000410371 100 ntBASIC-0.98□□□□□ -2.57
USF1P22415 SCARNA18B-201ENST00000458806 135 ntBASIC-0.98□□□□□ -2.57
USF1P22415 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.98□□□□□ -2.57
USF1P22415 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.98□□□□□ -2.57
USF1P22415 AP002392.1-201ENST00000537692 208 ntBASIC-0.98□□□□□ -2.57
USF1P22415 MIR6854-201ENST00000614935 69 ntBASIC-0.98□□□□□ -2.57
USF1P22415 MIR4320-201ENST00000636981 65 ntBASIC-0.98□□□□□ -2.57
USF1P22415 Y_RNA.47-201ENST00000362697 108 ntBASIC-0.99□□□□□ -2.57
USF1P22415 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.99□□□□□ -2.57
USF1P22415 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.99□□□□□ -2.57
USF1P22415 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.99□□□□□ -2.57
USF1P22415 MIR548G-201ENST00000408442 89 ntBASIC-0.99□□□□□ -2.57
USF1P22415 AC022137.1-201ENST00000483735 151 ntBASIC-0.99□□□□□ -2.57
USF1P22415 RNU6-762P-201ENST00000517107 102 ntBASIC-0.99□□□□□ -2.57
USF1P22415 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.99□□□□□ -2.57
USF1P22415 AL117187.1-201ENST00000555482 181 ntBASIC-0.99□□□□□ -2.57
USF1P22415 AC021753.1-201ENST00000635724 168 ntBASIC-0.99□□□□□ -2.57
USF1P22415 RNU6-1313P-201ENST00000362622 102 ntBASIC-1□□□□□ -2.57
USF1P22415 RNU6-867P-201ENST00000364956 107 ntBASIC-1□□□□□ -2.57
USF1P22415 RNU6-1160P-201ENST00000384546 104 ntBASIC-1□□□□□ -2.57
USF1P22415 RNU6-592P-201ENST00000411333 103 ntBASIC-1□□□□□ -2.57
USF1P22415 AL353813.1-201ENST00000440700 253 ntBASIC-1□□□□□ -2.57
USF1P22415 AP000533.3-201ENST00000447704 118 ntBASIC-1□□□□□ -2.57
USF1P22415 SNORD42B-201ENST00000458893 67 ntBASIC-1□□□□□ -2.57
USF1P22415 RN7SKP19-201ENST00000516016 252 ntBASIC-1□□□□□ -2.57
USF1P22415 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1□□□□□ -2.57
USF1P22415 AC140658.3-201ENST00000567603 271 ntBASIC-1□□□□□ -2.57
USF1P22415 DNAJC19P2-201ENST00000593340 302 ntBASIC-1□□□□□ -2.57
USF1P22415 RNU6-90P-201ENST00000606352 106 ntBASIC-1□□□□□ -2.57
USF1P22415 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.01□□□□□ -2.57
USF1P22415 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.01□□□□□ -2.57
USF1P22415 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.01□□□□□ -2.57
USF1P22415 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.01□□□□□ -2.57
USF1P22415 SNORD74.6-201ENST00000364796 70 ntBASIC-1.01□□□□□ -2.57
USF1P22415 MIR759-201ENST00000390224 91 ntBASIC-1.01□□□□□ -2.57
USF1P22415 RNU6-466P-201ENST00000391224 103 ntBASIC-1.01□□□□□ -2.57
USF1P22415 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.01□□□□□ -2.57
USF1P22415 RNU7-121P-201ENST00000516604 62 ntBASIC-1.01□□□□□ -2.57
USF1P22415 AL512310.12-203ENST00000640543 90 ntBASIC-1.01□□□□□ -2.57
USF1P22415 SNORD38.1-201ENST00000363863 68 ntBASIC-1.02□□□□□ -2.57
USF1P22415 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.02□□□□□ -2.57
USF1P22415 RNU6-905P-201ENST00000384434 107 ntBASIC-1.02□□□□□ -2.57
USF1P22415 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.02□□□□□ -2.57
USF1P22415 MIR3658-201ENST00000636291 56 ntBASIC-1.02□□□□□ -2.57
USF1P22415 MIR382-201ENST00000637119 76 ntBASIC-1.02□□□□□ -2.57
USF1P22415 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.03□□□□□ -2.57
USF1P22415 SNORD115-23-201ENST00000364461 82 ntBASIC-1.03□□□□□ -2.57
USF1P22415 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.03□□□□□ -2.57
USF1P22415 RNU6-24P-201ENST00000384440 107 ntBASIC-1.03□□□□□ -2.57
USF1P22415 MIR451A-201ENST00000385059 72 ntBASIC-1.03□□□□□ -2.57
USF1P22415 MIR1468-201ENST00000410600 86 ntBASIC-1.03□□□□□ -2.57
USF1P22415 SNORA7.5-201ENST00000410672 110 ntBASIC-1.03□□□□□ -2.57
USF1P22415 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.03□□□□□ -2.57
USF1P22415 MIR6773-201ENST00000612812 74 ntBASIC-1.03□□□□□ -2.57
USF1P22415 RNU6-797P-201ENST00000363101 109 ntBASIC-1.04□□□□□ -2.58
USF1P22415 SNORD114-4-201ENST00000363962 75 ntBASIC-1.04□□□□□ -2.58
USF1P22415 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.04□□□□□ -2.58
USF1P22415 AL117351.2-201ENST00000513571 157 ntBASIC-1.04□□□□□ -2.58
USF1P22415 RNU6-75P-201ENST00000515944 104 ntBASIC-1.04□□□□□ -2.58
USF1P22415 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.05□□□□□ -2.58
USF1P22415 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.05□□□□□ -2.58
USF1P22415 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.05□□□□□ -2.58
USF1P22415 MIR147A-201ENST00000385079 72 ntBASIC-1.05□□□□□ -2.58
USF1P22415 U3.27-201ENST00000391237 200 ntBASIC-1.05□□□□□ -2.58
USF1P22415 RNU6-337P-201ENST00000391243 106 ntBASIC-1.05□□□□□ -2.58
USF1P22415 AP001094.1-201ENST00000579805 193 ntBASIC-1.05□□□□□ -2.58
USF1P22415 RNU6-363P-201ENST00000362895 105 ntBASIC-1.06□□□□□ -2.58
USF1P22415 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.06□□□□□ -2.58
USF1P22415 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.06□□□□□ -2.58
USF1P22415 MIRLET7B-201ENST00000385140 83 ntBASIC-1.06□□□□□ -2.58
USF1P22415 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.06□□□□□ -2.58
USF1P22415 AC130289.1-201ENST00000577321 73 ntBASIC-1.06□□□□□ -2.58
USF1P22415 MIR3121-201ENST00000579680 77 ntBASIC-1.06□□□□□ -2.58
USF1P22415 MIR4306-201ENST00000583390 91 ntBASIC-1.06□□□□□ -2.58
USF1P22415 AC008737.2-201ENST00000599446 118 ntBASIC-1.06□□□□□ -2.58
USF1P22415 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.07□□□□□ -2.58
USF1P22415 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.07□□□□□ -2.58
USF1P22415 MIR3128-201ENST00000581957 66 ntBASIC-1.07□□□□□ -2.58
USF1P22415 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.08□□□□□ -2.58
USF1P22415 MIR3115-201ENST00000577915 68 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms