Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 MIR6733-201ENST00000635723 61 ntBASIC2.31□□□□□ -2.04
COL9A1P20849 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.31□□□□□ -2.04
COL9A1P20849 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
COL9A1P20849 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
COL9A1P20849 MIR21-201ENST00000362134 72 ntBASIC2.3□□□□□ -2.04
COL9A1P20849 RNA5SP393-201ENST00000363423 117 ntBASIC2.3□□□□□ -2.04
COL9A1P20849 Y_RNA.327-201ENST00000365201 102 ntBASIC2.3□□□□□ -2.04
COL9A1P20849 Y_RNA.433-201ENST00000384089 102 ntBASIC2.3□□□□□ -2.04
COL9A1P20849 MIR221-201ENST00000385135 110 ntBASIC2.3□□□□□ -2.04
COL9A1P20849 RNA5SP299-201ENST00000391203 116 ntBASIC2.3□□□□□ -2.04
COL9A1P20849 RNU7-56P-201ENST00000458744 62 ntBASIC2.3□□□□□ -2.04
COL9A1P20849 SNORA31.14-201ENST00000516728 116 ntBASIC2.3□□□□□ -2.04
COL9A1P20849 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
COL9A1P20849 Y_RNA.32-201ENST00000362589 110 ntBASIC2.29□□□□□ -2.04
COL9A1P20849 SNORA2.1-201ENST00000363089 137 ntBASIC2.29□□□□□ -2.04
COL9A1P20849 RNU6-753P-201ENST00000363926 107 ntBASIC2.29□□□□□ -2.04
COL9A1P20849 MIR598-201ENST00000384868 97 ntBASIC2.29□□□□□ -2.04
COL9A1P20849 RNU6-994P-201ENST00000410507 111 ntBASIC2.29□□□□□ -2.04
COL9A1P20849 RNU7-74P-201ENST00000459104 62 ntBASIC2.29□□□□□ -2.04
COL9A1P20849 RNA5SP233-201ENST00000459153 113 ntBASIC2.29□□□□□ -2.04
COL9A1P20849 RNU6-122P-201ENST00000516818 107 ntBASIC2.29□□□□□ -2.04
COL9A1P20849 RNU7-161P-201ENST00000517289 62 ntBASIC2.29□□□□□ -2.04
COL9A1P20849 AC023827.1-201ENST00000569247 97 ntBASIC2.29□□□□□ -2.04
COL9A1P20849 MIR4299-201ENST00000577899 72 ntBASIC2.29□□□□□ -2.04
COL9A1P20849 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.29□□□□□ -2.04
COL9A1P20849 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
COL9A1P20849 RNU6-54P-201ENST00000365563 107 ntBASIC2.28□□□□□ -2.04
COL9A1P20849 MIR519E-201ENST00000385075 84 ntBASIC2.28□□□□□ -2.04
COL9A1P20849 SUMO2P12-201ENST00000405924 140 ntBASIC2.28□□□□□ -2.04
COL9A1P20849 MIR3938-201ENST00000582157 103 ntBASIC2.28□□□□□ -2.04
COL9A1P20849 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
COL9A1P20849 RNU6-392P-201ENST00000364926 101 ntBASIC2.27□□□□□ -2.05
COL9A1P20849 SNORA31.2-201ENST00000516019 134 ntBASIC2.27□□□□□ -2.05
COL9A1P20849 AC067863.3-201ENST00000624172 122 ntBASIC2.27□□□□□ -2.05
COL9A1P20849 RNU7-104P-201ENST00000459398 79 ntBASIC2.26□□□□□ -2.05
COL9A1P20849 RNU7-21P-201ENST00000459430 62 ntBASIC2.26□□□□□ -2.05
COL9A1P20849 RNA5SP476-201ENST00000516613 103 ntBASIC2.26□□□□□ -2.05
COL9A1P20849 RNU6-92P-201ENST00000605893 104 ntBASIC2.26□□□□□ -2.05
COL9A1P20849 MIR6766-201ENST00000622641 72 ntBASIC2.26□□□□□ -2.05
COL9A1P20849 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
COL9A1P20849 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
COL9A1P20849 SNORD114-22-201ENST00000365423 72 ntBASIC2.25□□□□□ -2.05
COL9A1P20849 SNORA80D-201ENST00000384488 135 ntBASIC2.25□□□□□ -2.05
COL9A1P20849 MIR100-201ENST00000385259 80 ntBASIC2.25□□□□□ -2.05
COL9A1P20849 RNA5SP182-201ENST00000516064 82 ntBASIC2.25□□□□□ -2.05
COL9A1P20849 RN7SKP88-201ENST00000516847 250 ntBASIC2.25□□□□□ -2.05
COL9A1P20849 7SK.8-201ENST00000612110 250 ntBASIC2.25□□□□□ -2.05
COL9A1P20849 7SK.11-201ENST00000615477 250 ntBASIC2.25□□□□□ -2.05
COL9A1P20849 7SK.13-201ENST00000622040 250 ntBASIC2.25□□□□□ -2.05
COL9A1P20849 MIR6739-201ENST00000622461 75 ntBASIC2.25□□□□□ -2.05
COL9A1P20849 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
COL9A1P20849 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
COL9A1P20849 MIR1-1-201ENST00000362147 71 ntBASIC2.24□□□□□ -2.05
COL9A1P20849 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.24□□□□□ -2.05
COL9A1P20849 HAR1A.1-201ENST00000459583 118 ntBASIC2.24□□□□□ -2.05
COL9A1P20849 RNU6-1089P-201ENST00000516473 104 ntBASIC2.24□□□□□ -2.05
COL9A1P20849 MIR3198-2-201ENST00000577868 80 ntBASIC2.24□□□□□ -2.05
COL9A1P20849 Y_RNA.250-201ENST00000364542 110 ntBASIC2.23□□□□□ -2.05
COL9A1P20849 MIR17-201ENST00000385012 84 ntBASIC2.23□□□□□ -2.05
COL9A1P20849 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.23□□□□□ -2.05
COL9A1P20849 RNU7-90P-201ENST00000459216 62 ntBASIC2.23□□□□□ -2.05
COL9A1P20849 RNU6-135P-201ENST00000516769 101 ntBASIC2.23□□□□□ -2.05
COL9A1P20849 RNU6-656P-201ENST00000516785 107 ntBASIC2.23□□□□□ -2.05
COL9A1P20849 RNA5SP102-201ENST00000516865 106 ntBASIC2.23□□□□□ -2.05
COL9A1P20849 MIR6895-201ENST00000613497 78 ntBASIC2.23□□□□□ -2.05
COL9A1P20849 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
COL9A1P20849 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
COL9A1P20849 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
COL9A1P20849 Z82195.2-201ENST00000612348 18351 ntBASIC2.22□□□□□ -2.05
COL9A1P20849 Y_RNA.363-201ENST00000365529 113 ntBASIC2.22□□□□□ -2.05
COL9A1P20849 RNU6V-201ENST00000384105 107 ntBASIC2.22□□□□□ -2.05
COL9A1P20849 SNORA25.15-201ENST00000516487 89 ntBASIC2.22□□□□□ -2.05
COL9A1P20849 uc_338.10-201ENST00000621872 182 ntBASIC2.22□□□□□ -2.05
COL9A1P20849 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COL9A1P20849 RNU6-1312P-201ENST00000362425 108 ntBASIC2.21□□□□□ -2.06
COL9A1P20849 SNORD42B-201ENST00000458893 67 ntBASIC2.21□□□□□ -2.06
COL9A1P20849 MIR3670-2-201ENST00000582974 65 ntBASIC2.21□□□□□ -2.06
COL9A1P20849 MIR3670-1-201ENST00000584160 65 ntBASIC2.21□□□□□ -2.06
COL9A1P20849 MIR3670-3-201ENST00000584855 65 ntBASIC2.21□□□□□ -2.06
COL9A1P20849 MIR3670-4-201ENST00000612260 65 ntBASIC2.21□□□□□ -2.06
COL9A1P20849 AL157834.3-201ENST00000615543 103 ntBASIC2.21□□□□□ -2.06
COL9A1P20849 MIR520F-201ENST00000384824 87 ntBASIC2.2□□□□□ -2.06
COL9A1P20849 AC003989.2-201ENST00000440224 169 ntBASIC2.2□□□□□ -2.06
COL9A1P20849 RNU1-123P-201ENST00000458950 160 ntBASIC2.2□□□□□ -2.06
COL9A1P20849 RNU7-95P-201ENST00000459222 64 ntBASIC2.2□□□□□ -2.06
COL9A1P20849 RNA5SP82-201ENST00000516707 92 ntBASIC2.2□□□□□ -2.06
COL9A1P20849 MIR4303-201ENST00000581299 66 ntBASIC2.2□□□□□ -2.06
COL9A1P20849 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL9A1P20849 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.19□□□□□ -2.06
COL9A1P20849 RNU6-35P-201ENST00000384530 107 ntBASIC2.18□□□□□ -2.06
COL9A1P20849 RNU6-930P-201ENST00000390938 100 ntBASIC2.18□□□□□ -2.06
COL9A1P20849 RNU1-78P-201ENST00000391248 165 ntBASIC2.18□□□□□ -2.06
COL9A1P20849 RNA5SP200-201ENST00000516360 103 ntBASIC2.18□□□□□ -2.06
COL9A1P20849 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.18□□□□□ -2.06
COL9A1P20849 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
COL9A1P20849 ZNF355P-201ENST00000427301 3216 ntBASIC2.18□□□□□ -2.06
COL9A1P20849 SNORD114-4-201ENST00000363962 75 ntBASIC2.17□□□□□ -2.06
COL9A1P20849 MT-TY-201ENST00000387409 66 ntBASIC2.17□□□□□ -2.06
COL9A1P20849 MIR934-201ENST00000401241 83 ntBASIC2.17□□□□□ -2.06
COL9A1P20849 MIR548F3-201ENST00000408509 87 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 263.6 ms