Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 RNU6-1113P-201ENST00000384348 107 ntBASIC-4.42□□□□□ -3.12
VCANP13611 SNORA40.9-201ENST00000515895 93 ntBASIC-4.42□□□□□ -3.12
VCANP13611 Y_RNA.66-201ENST00000362862 102 ntBASIC-4.42□□□□□ -3.12
VCANP13611 SNORD4B-201ENST00000459083 72 ntBASIC-4.42□□□□□ -3.12
VCANP13611 MIR3912-201ENST00000577566 105 ntBASIC-4.42□□□□□ -3.12
VCANP13611 MIR4666A-201ENST00000580160 79 ntBASIC-4.42□□□□□ -3.12
VCANP13611 MIR548AB-201ENST00000584917 84 ntBASIC-4.43□□□□□ -3.12
VCANP13611 AC005357.1-201ENST00000588399 301 ntBASIC-4.43□□□□□ -3.12
VCANP13611 RNU6-715P-201ENST00000365204 103 ntBASIC-4.44□□□□□ -3.12
VCANP13611 SNORA19.3-201ENST00000516165 130 ntBASIC-4.44□□□□□ -3.12
VCANP13611 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-4.44□□□□□ -3.12
VCANP13611 AC093424.1-201ENST00000604999 338 ntBASIC-4.44□□□□□ -3.12
VCANP13611 MTCO1P27-201ENST00000448269 226 ntBASIC-4.44□□□□□ -3.12
VCANP13611 SCARNA15-202ENST00000516881 127 ntBASIC-4.44□□□□□ -3.12
VCANP13611 RNU6-1301P-201ENST00000362724 104 ntBASIC-4.44□□□□□ -3.12
VCANP13611 MTND3P23-201ENST00000431980 347 ntBASIC-4.44□□□□□ -3.12
VCANP13611 RNU6-1028P-201ENST00000517164 93 ntBASIC-4.44□□□□□ -3.12
VCANP13611 RNU6-979P-201ENST00000383896 107 ntBASIC-4.45□□□□□ -3.12
VCANP13611 SNORD116.2-201ENST00000391251 93 ntBASIC-4.45□□□□□ -3.12
VCANP13611 RNU6-103P-201ENST00000363686 107 ntBASIC-4.45□□□□□ -3.12
VCANP13611 MIR558-201ENST00000384920 94 ntBASIC-4.45□□□□□ -3.12
VCANP13611 RNU6-982P-201ENST00000516216 102 ntBASIC-4.45□□□□□ -3.12
VCANP13611 AC064836.2-201ENST00000609491 462 ntBASIC-4.45□□□□□ -3.12
VCANP13611 MIR1244-1-201ENST00000612829 85 ntBASIC-4.45□□□□□ -3.12
VCANP13611 MIR1244-3-201ENST00000635744 85 ntBASIC-4.45□□□□□ -3.12
VCANP13611 MIR1244-2-201ENST00000636449 85 ntBASIC-4.45□□□□□ -3.12
VCANP13611 MIR1244-4-202ENST00000636813 85 ntBASIC-4.45□□□□□ -3.12
VCANP13611 SNORA18.5-201ENST00000516616 101 ntBASIC-4.46□□□□□ -3.12
VCANP13611 Y_RNA.72-201ENST00000362894 103 ntBASIC-4.47□□□□□ -3.12
VCANP13611 SNORD77.4-201ENST00000516158 81 ntBASIC-4.47□□□□□ -3.12
VCANP13611 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-4.47□□□□□ -3.12
VCANP13611 AL513043.2-201ENST00000573941 143 ntBASIC-4.47□□□□□ -3.12
VCANP13611 AC005014.2-201ENST00000607795 599 ntBASIC-4.47□□□□□ -3.12
VCANP13611 SNORA40B-201ENST00000385573 128 ntBASIC-4.47□□□□□ -3.13
VCANP13611 SNORD116-30-201ENST00000516468 85 ntBASIC-4.48□□□□□ -3.13
VCANP13611 RNU6-636P-201ENST00000384598 107 ntBASIC-4.48□□□□□ -3.13
VCANP13611 RNU7-85P-201ENST00000458851 63 ntBASIC-4.48□□□□□ -3.13
VCANP13611 IGHVII-40-1-201ENST00000517316 58 ntBASIC-4.48□□□□□ -3.13
VCANP13611 AL512310.12-203ENST00000640543 90 ntBASIC-4.49□□□□□ -3.13
VCANP13611 RNU6-620P-201ENST00000384017 96 ntBASIC-4.49□□□□□ -3.13
VCANP13611 RNU6-933P-201ENST00000384424 107 ntBASIC-4.49□□□□□ -3.13
VCANP13611 MIR320C1-201ENST00000408566 88 ntBASIC-4.49□□□□□ -3.13
VCANP13611 AC098826.2-201ENST00000452011 651 ntBASIC-4.49□□□□□ -3.13
VCANP13611 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-4.5□□□□□ -3.13
VCANP13611 RNU6-434P-201ENST00000384376 107 ntBASIC-4.5□□□□□ -3.13
VCANP13611 RNU7-138P-201ENST00000459479 64 ntBASIC-4.5□□□□□ -3.13
VCANP13611 RNU4-40P-201ENST00000364351 143 ntBASIC-4.51□□□□□ -3.13
VCANP13611 RNU6-1013P-201ENST00000384180 107 ntBASIC-4.51□□□□□ -3.13
VCANP13611 RNU6-419P-201ENST00000517030 63 ntBASIC-4.51□□□□□ -3.13
VCANP13611 Y_RNA.202-201ENST00000364083 110 ntBASIC-4.52□□□□□ -3.13
VCANP13611 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-4.52□□□□□ -3.13
VCANP13611 RNU7-175P-201ENST00000515915 61 ntBASIC-4.52□□□□□ -3.13
VCANP13611 Y_RNA.672-201ENST00000516289 104 ntBASIC-4.52□□□□□ -3.13
VCANP13611 Y_RNA.691-201ENST00000516611 103 ntBASIC-4.53□□□□□ -3.13
VCANP13611 MIR548H4-201ENST00000408689 111 ntBASIC-4.53□□□□□ -3.14
VCANP13611 AC009161.2-201ENST00000624626 138 ntBASIC-4.53□□□□□ -3.14
VCANP13611 RNU6-99P-201ENST00000364721 107 ntBASIC-4.54□□□□□ -3.14
VCANP13611 RNU5E-4P-201ENST00000364931 120 ntBASIC-4.54□□□□□ -3.14
VCANP13611 RNU6-411P-201ENST00000384451 107 ntBASIC-4.54□□□□□ -3.14
VCANP13611 TMSB4XP3-201ENST00000445144 114 ntBASIC-4.54□□□□□ -3.14
VCANP13611 AC060780.3-201ENST00000589464 80 ntBASIC-4.54□□□□□ -3.14
VCANP13611 RNU6-570P-201ENST00000517051 105 ntBASIC-4.54□□□□□ -3.14
VCANP13611 RNU6-789P-201ENST00000517105 102 ntBASIC-4.54□□□□□ -3.14
VCANP13611 AC099654.14-201ENST00000638599 341 ntBASIC-4.54□□□□□ -3.14
VCANP13611 MTCO3P23-201ENST00000561363 289 ntBASIC-4.55□□□□□ -3.14
VCANP13611 SNORD45.1-201ENST00000363181 77 ntBASIC-4.55□□□□□ -3.14
VCANP13611 RNU6-1338P-201ENST00000516328 91 ntBASIC-4.56□□□□□ -3.14
VCANP13611 RNU6-521P-201ENST00000516663 105 ntBASIC-4.56□□□□□ -3.14
VCANP13611 RNU6-353P-201ENST00000364266 108 ntBASIC-4.56□□□□□ -3.14
VCANP13611 AC090574.1-201ENST00000623186 233 ntBASIC-4.57□□□□□ -3.14
VCANP13611 RNU4-68P-201ENST00000364314 141 ntBASIC-4.57□□□□□ -3.14
VCANP13611 RNU2-55P-201ENST00000411146 174 ntBASIC-4.57□□□□□ -3.14
VCANP13611 RNU6-92P-201ENST00000605893 104 ntBASIC-4.57□□□□□ -3.14
VCANP13611 SNORA40.16-201ENST00000517238 121 ntBASIC-4.58□□□□□ -3.14
VCANP13611 AC090617.9-201ENST00000623751 147 ntBASIC-4.58□□□□□ -3.14
VCANP13611 SEPT14P19-203ENST00000633205 211 ntBASIC-4.58□□□□□ -3.14
VCANP13611 SCARNA24.1-201ENST00000516465 137 ntBASIC-4.58□□□□□ -3.14
VCANP13611 RNU6-616P-201ENST00000384353 107 ntBASIC-4.59□□□□□ -3.14
VCANP13611 RNU6-899P-201ENST00000363947 107 ntBASIC-4.59□□□□□ -3.14
VCANP13611 RNU6-507P-201ENST00000516045 100 ntBASIC-4.59□□□□□ -3.14
VCANP13611 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-4.59□□□□□ -3.14
VCANP13611 AL365205.2-201ENST00000594586 68 ntBASIC-4.59□□□□□ -3.14
VCANP13611 RNU6-144P-201ENST00000383951 107 ntBASIC-4.6□□□□□ -3.15
VCANP13611 RNU2-72P-201ENST00000411175 163 ntBASIC-4.6□□□□□ -3.15
VCANP13611 SNORD50.1-201ENST00000362987 71 ntBASIC-4.6□□□□□ -3.15
VCANP13611 RNU6-501P-201ENST00000364072 100 ntBASIC-4.61□□□□□ -3.15
VCANP13611 Y_RNA.542-201ENST00000384641 111 ntBASIC-4.61□□□□□ -3.15
VCANP13611 AC082651.2-201ENST00000496833 166 ntBASIC-4.61□□□□□ -3.15
VCANP13611 SNORD56.2-201ENST00000363242 71 ntBASIC-4.61□□□□□ -3.15
VCANP13611 SNORD115-47-201ENST00000391226 86 ntBASIC-4.61□□□□□ -3.15
VCANP13611 RNA5SP153-201ENST00000516498 76 ntBASIC-4.61□□□□□ -3.15
VCANP13611 RNU6-231P-201ENST00000517122 103 ntBASIC-4.61□□□□□ -3.15
VCANP13611 MIR548Z-201ENST00000584743 97 ntBASIC-4.61□□□□□ -3.15
VCANP13611 Y_RNA.705-201ENST00000516862 110 ntBASIC-4.62□□□□□ -3.15
VCANP13611 RNU4-90P-201ENST00000362773 141 ntBASIC-4.62□□□□□ -3.15
VCANP13611 SNORD113-1-201ENST00000365321 69 ntBASIC-4.62□□□□□ -3.15
VCANP13611 SNORA18.6-201ENST00000516792 115 ntBASIC-4.62□□□□□ -3.15
VCANP13611 RNU6-1005P-201ENST00000384519 107 ntBASIC-4.62□□□□□ -3.15
VCANP13611 SNORD77.2-201ENST00000391045 68 ntBASIC-4.62□□□□□ -3.15
VCANP13611 AL593851.1-201ENST00000426171 157 ntBASIC-4.62□□□□□ -3.15
Retrieved 100 of 98,524 protein–RNA pairs in 206.3 ms