Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC103591.3-201ENST00000608684 209 ntBASIC-1.52□□□□□ -2.65
ABCA1O95477 Z99129.1-201ENST00000612510 255 ntBASIC-1.52□□□□□ -2.65
ABCA1O95477 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.53□□□□□ -2.65
ABCA1O95477 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.53□□□□□ -2.65
ABCA1O95477 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.53□□□□□ -2.65
ABCA1O95477 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.53□□□□□ -2.65
ABCA1O95477 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.53□□□□□ -2.65
ABCA1O95477 RNU6-937P-201ENST00000384325 106 ntBASIC-1.53□□□□□ -2.65
ABCA1O95477 RNU6-699P-201ENST00000517081 110 ntBASIC-1.53□□□□□ -2.65
ABCA1O95477 TRDV1-202ENST00000621643 102 ntBASIC-1.53□□□□□ -2.65
ABCA1O95477 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.54□□□□□ -2.66
ABCA1O95477 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.54□□□□□ -2.66
ABCA1O95477 SNORD115-46-201ENST00000390982 71 ntBASIC-1.54□□□□□ -2.66
ABCA1O95477 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.54□□□□□ -2.66
ABCA1O95477 MIR4696-201ENST00000581431 70 ntBASIC-1.54□□□□□ -2.66
ABCA1O95477 MIR548O2-201ENST00000616090 70 ntBASIC-1.54□□□□□ -2.66
ABCA1O95477 SNORA63.7-201ENST00000365579 123 ntBASIC-1.54□□□□□ -2.66
ABCA1O95477 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.54□□□□□ -2.66
ABCA1O95477 MIR519A2-201ENST00000384990 87 ntBASIC-1.54□□□□□ -2.66
ABCA1O95477 RNU6-630P-201ENST00000391258 106 ntBASIC-1.54□□□□□ -2.66
ABCA1O95477 MTND4P17-201ENST00000470444 350 ntBASIC-1.54□□□□□ -2.66
ABCA1O95477 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.54□□□□□ -2.66
ABCA1O95477 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.54□□□□□ -2.66
ABCA1O95477 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.54□□□□□ -2.66
ABCA1O95477 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.54□□□□□ -2.66
ABCA1O95477 Y_RNA.41-201ENST00000362646 102 ntBASIC-1.55□□□□□ -2.66
ABCA1O95477 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.55□□□□□ -2.66
ABCA1O95477 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.55□□□□□ -2.66
ABCA1O95477 SNORD42B-201ENST00000458893 67 ntBASIC-1.55□□□□□ -2.66
ABCA1O95477 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.55□□□□□ -2.66
ABCA1O95477 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.55□□□□□ -2.66
ABCA1O95477 Y_RNA.217-201ENST00000364214 105 ntBASIC-1.55□□□□□ -2.66
ABCA1O95477 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.55□□□□□ -2.66
ABCA1O95477 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.55□□□□□ -2.66
ABCA1O95477 RNU4-43P-201ENST00000410628 137 ntBASIC-1.55□□□□□ -2.66
ABCA1O95477 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.55□□□□□ -2.66
ABCA1O95477 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.55□□□□□ -2.66
ABCA1O95477 Y_RNA.641-201ENST00000459414 105 ntBASIC-1.55□□□□□ -2.66
ABCA1O95477 MTND3P3-201ENST00000505004 126 ntBASIC-1.55□□□□□ -2.66
ABCA1O95477 RNU6-719P-201ENST00000516671 104 ntBASIC-1.55□□□□□ -2.66
ABCA1O95477 SNORA20.3-201ENST00000516880 132 ntBASIC-1.55□□□□□ -2.66
ABCA1O95477 CYP3A54P-201ENST00000566950 75 ntBASIC-1.55□□□□□ -2.66
ABCA1O95477 AC084781.2-201ENST00000615568 161 ntBASIC-1.55□□□□□ -2.66
ABCA1O95477 RNU6-495P-201ENST00000362995 107 ntBASIC-1.56□□□□□ -2.66
ABCA1O95477 RNU6-824P-201ENST00000363724 104 ntBASIC-1.56□□□□□ -2.66
ABCA1O95477 RNU7-24P-201ENST00000458867 62 ntBASIC-1.56□□□□□ -2.66
ABCA1O95477 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.56□□□□□ -2.66
ABCA1O95477 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.56□□□□□ -2.66
ABCA1O95477 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.56□□□□□ -2.66
ABCA1O95477 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.56□□□□□ -2.66
ABCA1O95477 RNU6-766P-201ENST00000362478 107 ntBASIC-1.57□□□□□ -2.66
ABCA1O95477 SNORA33.1-201ENST00000364957 130 ntBASIC-1.57□□□□□ -2.66
ABCA1O95477 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.57□□□□□ -2.66
ABCA1O95477 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.57□□□□□ -2.66
ABCA1O95477 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.57□□□□□ -2.66
ABCA1O95477 U6.96-201ENST00000636425 70 ntBASIC-1.57□□□□□ -2.66
ABCA1O95477 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.57□□□□□ -2.66
ABCA1O95477 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.57□□□□□ -2.66
ABCA1O95477 SNORD116-29-201ENST00000384516 83 ntBASIC-1.57□□□□□ -2.66
ABCA1O95477 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.57□□□□□ -2.66
ABCA1O95477 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.57□□□□□ -2.66
ABCA1O95477 AC097484.2-201ENST00000509147 251 ntBASIC-1.57□□□□□ -2.66
ABCA1O95477 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.57□□□□□ -2.66
ABCA1O95477 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.57□□□□□ -2.66
ABCA1O95477 RNU6-647P-201ENST00000364243 107 ntBASIC-1.58□□□□□ -2.66
ABCA1O95477 MIR513C-201ENST00000401352 84 ntBASIC-1.58□□□□□ -2.66
ABCA1O95477 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.58□□□□□ -2.66
ABCA1O95477 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.59□□□□□ -2.66
ABCA1O95477 RNU7-154P-201ENST00000516194 62 ntBASIC-1.59□□□□□ -2.66
ABCA1O95477 snoU18.1-201ENST00000629629 71 ntBASIC-1.59□□□□□ -2.66
ABCA1O95477 SNORD113-8-201ENST00000363497 74 ntBASIC-1.59□□□□□ -2.66
ABCA1O95477 RNU6-990P-201ENST00000364385 104 ntBASIC-1.59□□□□□ -2.66
ABCA1O95477 SNORD115-31-201ENST00000365318 82 ntBASIC-1.59□□□□□ -2.66
ABCA1O95477 RNU6-987P-201ENST00000384759 104 ntBASIC-1.59□□□□□ -2.66
ABCA1O95477 RNU2-4P-201ENST00000606190 192 ntBASIC-1.59□□□□□ -2.66
ABCA1O95477 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.6□□□□□ -2.67
ABCA1O95477 RNU6-978P-201ENST00000364371 103 ntBASIC-1.6□□□□□ -2.67
ABCA1O95477 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.6□□□□□ -2.67
ABCA1O95477 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.6□□□□□ -2.67
ABCA1O95477 U3.27-201ENST00000391237 200 ntBASIC-1.6□□□□□ -2.67
ABCA1O95477 AC138393.2-201ENST00000414742 246 ntBASIC-1.6□□□□□ -2.67
ABCA1O95477 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.6□□□□□ -2.67
ABCA1O95477 RNU6-290P-201ENST00000365212 101 ntBASIC-1.6□□□□□ -2.67
ABCA1O95477 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.6□□□□□ -2.67
ABCA1O95477 RBMX2P4-201ENST00000441256 376 ntBASIC-1.6□□□□□ -2.67
ABCA1O95477 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.6□□□□□ -2.67
ABCA1O95477 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.6□□□□□ -2.67
ABCA1O95477 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.6□□□□□ -2.67
ABCA1O95477 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.6□□□□□ -2.67
ABCA1O95477 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.6□□□□□ -2.67
ABCA1O95477 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.6□□□□□ -2.67
ABCA1O95477 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.61□□□□□ -2.67
ABCA1O95477 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.61□□□□□ -2.67
ABCA1O95477 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.61□□□□□ -2.67
ABCA1O95477 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.61□□□□□ -2.67
ABCA1O95477 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.61□□□□□ -2.67
ABCA1O95477 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.61□□□□□ -2.67
ABCA1O95477 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.61□□□□□ -2.67
ABCA1O95477 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.61□□□□□ -2.67
ABCA1O95477 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.61□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms