Protein–RNA interactions for Protein: O15240

VGF, Neurosecretory protein VGF, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGFO15240 RNU6-910P-201ENST00000390844 107 ntBASIC2.57□□□□□ -2
VGFO15240 SNORA67.5-201ENST00000391036 107 ntBASIC2.57□□□□□ -2
VGFO15240 RNU1-78P-201ENST00000391248 165 ntBASIC2.57□□□□□ -2
VGFO15240 MTND4LP19-201ENST00000403051 166 ntBASIC2.57□□□□□ -2
VGFO15240 MIR4422-201ENST00000581938 83 ntBASIC2.57□□□□□ -2
VGFO15240 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VGFO15240 Y_RNA.32-201ENST00000362589 110 ntBASIC2.56□□□□□ -2
VGFO15240 SNORA31.14-201ENST00000516728 116 ntBASIC2.56□□□□□ -2
VGFO15240 Y_RNA.174-201ENST00000363781 105 ntBASIC2.55□□□□□ -2
VGFO15240 MIR520F-201ENST00000384824 87 ntBASIC2.55□□□□□ -2
VGFO15240 MIR216B-201ENST00000390186 82 ntBASIC2.55□□□□□ -2
VGFO15240 AC012493.3-201ENST00000604494 112 ntBASIC2.55□□□□□ -2
VGFO15240 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
VGFO15240 RNU6-1126P-201ENST00000384002 107 ntBASIC2.54□□□□□ -2
VGFO15240 AL359821.1-201ENST00000605519 182 ntBASIC2.54□□□□□ -2
VGFO15240 AC103706.3-201ENST00000636297 85 ntBASIC2.54□□□□□ -2
VGFO15240 Y_RNA.226-201ENST00000364337 114 ntBASIC2.53□□□□□ -2
VGFO15240 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.53□□□□□ -2
VGFO15240 SNORD75.2-201ENST00000408784 58 ntBASIC2.53□□□□□ -2
VGFO15240 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.53□□□□□ -2
VGFO15240 AC067940.1-201ENST00000458411 300 ntBASIC2.53□□□□□ -2
VGFO15240 MIR4511-201ENST00000582784 87 ntBASIC2.53□□□□□ -2
VGFO15240 uc_338.16-201ENST00000621804 95 ntBASIC2.53□□□□□ -2
VGFO15240 RNU4-62P-201ENST00000410125 130 ntBASIC2.52□□□□□ -2.01
VGFO15240 AP1B1P2-201ENST00000416196 106 ntBASIC2.52□□□□□ -2.01
VGFO15240 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.52□□□□□ -2.01
VGFO15240 RNA5SP403-201ENST00000363598 108 ntBASIC2.51□□□□□ -2.01
VGFO15240 RNU6-717P-201ENST00000459076 104 ntBASIC2.51□□□□□ -2.01
VGFO15240 RNU7-104P-201ENST00000459398 79 ntBASIC2.51□□□□□ -2.01
VGFO15240 MIR4781-201ENST00000585250 76 ntBASIC2.51□□□□□ -2.01
VGFO15240 AL096840.1-201ENST00000603287 93 ntBASIC2.51□□□□□ -2.01
VGFO15240 MIR502-201ENST00000606349 86 ntBASIC2.51□□□□□ -2.01
VGFO15240 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
VGFO15240 SNORA16.1-201ENST00000364597 132 ntBASIC2.5□□□□□ -2.01
VGFO15240 AC008834.1-201ENST00000511612 175 ntBASIC2.5□□□□□ -2.01
VGFO15240 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.5□□□□□ -2.01
VGFO15240 MIR548AG2-201ENST00000581228 64 ntBASIC2.5□□□□□ -2.01
VGFO15240 MIR3920-201ENST00000581751 86 ntBASIC2.5□□□□□ -2.01
VGFO15240 SNORD79.1-201ENST00000516069 84 ntBASIC2.49□□□□□ -2.01
VGFO15240 RNU7-161P-201ENST00000517289 62 ntBASIC2.49□□□□□ -2.01
VGFO15240 MIR4303-201ENST00000581299 66 ntBASIC2.49□□□□□ -2.01
VGFO15240 RNU6-499P-201ENST00000365615 107 ntBASIC2.48□□□□□ -2.01
VGFO15240 RNU6-987P-201ENST00000384759 104 ntBASIC2.48□□□□□ -2.01
VGFO15240 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
VGFO15240 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.48□□□□□ -2.01
VGFO15240 RNA5SP338-201ENST00000410495 85 ntBASIC2.48□□□□□ -2.01
VGFO15240 RNU7-24P-201ENST00000458867 62 ntBASIC2.48□□□□□ -2.01
VGFO15240 AC069503.3-201ENST00000618674 145 ntBASIC2.48□□□□□ -2.01
VGFO15240 RNU6-321P-201ENST00000410912 106 ntBASIC2.47□□□□□ -2.01
VGFO15240 RNU6-902P-201ENST00000517212 91 ntBASIC2.47□□□□□ -2.01
VGFO15240 MIR6509-201ENST00000614603 85 ntBASIC2.47□□□□□ -2.01
VGFO15240 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
VGFO15240 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VGFO15240 RNU6-495P-201ENST00000362995 107 ntBASIC2.46□□□□□ -2.02
VGFO15240 RNU6-1039P-201ENST00000383931 107 ntBASIC2.46□□□□□ -2.02
VGFO15240 MIR617-201ENST00000385030 97 ntBASIC2.46□□□□□ -2.02
VGFO15240 MIR1287-201ENST00000408492 90 ntBASIC2.46□□□□□ -2.02
VGFO15240 RNA5SP489-201ENST00000410986 109 ntBASIC2.46□□□□□ -2.02
VGFO15240 MTND4LP1-201ENST00000446263 157 ntBASIC2.46□□□□□ -2.02
VGFO15240 RNU6-982P-201ENST00000516216 102 ntBASIC2.46□□□□□ -2.02
VGFO15240 NAMPTP3-201ENST00000569273 224 ntBASIC2.46□□□□□ -2.02
VGFO15240 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VGFO15240 RNU4-37P-201ENST00000410214 84 ntBASIC2.45□□□□□ -2.02
VGFO15240 MIR1827-201ENST00000408549 66 ntBASIC2.44□□□□□ -2.02
VGFO15240 SNORA40.6-201ENST00000391153 128 ntBASIC2.43□□□□□ -2.02
VGFO15240 SNORA70.22-201ENST00000517160 124 ntBASIC2.43□□□□□ -2.02
VGFO15240 MIR4419B-201ENST00000577260 68 ntBASIC2.43□□□□□ -2.02
VGFO15240 AL109933.3-201ENST00000619095 188 ntBASIC2.43□□□□□ -2.02
VGFO15240 AC067863.3-201ENST00000624172 122 ntBASIC2.43□□□□□ -2.02
VGFO15240 RNU6-668P-201ENST00000364180 107 ntBASIC2.42□□□□□ -2.02
VGFO15240 MIR203A-201ENST00000384836 110 ntBASIC2.42□□□□□ -2.02
VGFO15240 RNA5SP364-201ENST00000516938 78 ntBASIC2.42□□□□□ -2.02
VGFO15240 AL136317.1-201ENST00000612653 226 ntBASIC2.42□□□□□ -2.02
VGFO15240 MIR548O2-201ENST00000616090 70 ntBASIC2.42□□□□□ -2.02
VGFO15240 RMST_2.1-201ENST00000617263 136 ntBASIC2.42□□□□□ -2.02
VGFO15240 RNU6-1187P-201ENST00000364771 110 ntBASIC2.4□□□□□ -2.03
VGFO15240 MIR519E-201ENST00000385075 84 ntBASIC2.4□□□□□ -2.03
VGFO15240 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.4□□□□□ -2.03
VGFO15240 RNU1-123P-201ENST00000458950 160 ntBASIC2.4□□□□□ -2.03
VGFO15240 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VGFO15240 RNA5SP117-201ENST00000365294 118 ntBASIC2.39□□□□□ -2.03
VGFO15240 AC110620.1-201ENST00000416042 228 ntBASIC2.39□□□□□ -2.03
VGFO15240 RNU7-95P-201ENST00000459222 64 ntBASIC2.39□□□□□ -2.03
VGFO15240 RNU6-54P-201ENST00000365563 107 ntBASIC2.38□□□□□ -2.03
VGFO15240 MIR222-201ENST00000384992 110 ntBASIC2.38□□□□□ -2.03
VGFO15240 TRMT112P2-201ENST00000512910 132 ntBASIC2.38□□□□□ -2.03
VGFO15240 Y_RNA.118-201ENST00000363300 101 ntBASIC2.37□□□□□ -2.03
VGFO15240 SUMO2P12-201ENST00000405924 140 ntBASIC2.37□□□□□ -2.03
VGFO15240 RNU7-74P-201ENST00000459104 62 ntBASIC2.37□□□□□ -2.03
VGFO15240 AC073869.9-201ENST00000641610 120 ntBASIC2.37□□□□□ -2.03
VGFO15240 SNORD12-201ENST00000391002 90 ntBASIC2.36□□□□□ -2.03
VGFO15240 MIR644A-201ENST00000385262 94 ntBASIC2.35□□□□□ -2.03
VGFO15240 RNU6-469P-201ENST00000516253 101 ntBASIC2.35□□□□□ -2.03
VGFO15240 RNU6-135P-201ENST00000516769 101 ntBASIC2.35□□□□□ -2.03
VGFO15240 RNU6V-201ENST00000384105 107 ntBASIC2.34□□□□□ -2.03
VGFO15240 MIR548L-201ENST00000408303 86 ntBASIC2.34□□□□□ -2.03
VGFO15240 AC002350.1-201ENST00000490759 375 ntBASIC2.34□□□□□ -2.03
VGFO15240 RNU6-669P-201ENST00000365575 107 ntBASIC2.33□□□□□ -2.04
VGFO15240 SNORD53B-201ENST00000577887 78 ntBASIC2.33□□□□□ -2.04
VGFO15240 MIR3657-201ENST00000584818 117 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms