Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.14□□□□□ -2.59
UPK1AO00322 MIR451A-201ENST00000385059 72 ntBASIC-1.14□□□□□ -2.59
UPK1AO00322 SNORD58.1-201ENST00000391313 66 ntBASIC-1.14□□□□□ -2.59
UPK1AO00322 MIR548E-201ENST00000408287 88 ntBASIC-1.14□□□□□ -2.59
UPK1AO00322 SCARNA18B-201ENST00000458806 135 ntBASIC-1.14□□□□□ -2.59
UPK1AO00322 AC022137.1-201ENST00000483735 151 ntBASIC-1.14□□□□□ -2.59
UPK1AO00322 MIR5704-201ENST00000584029 77 ntBASIC-1.14□□□□□ -2.59
UPK1AO00322 U4.1-201ENST00000620349 87 ntBASIC-1.14□□□□□ -2.59
UPK1AO00322 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.15□□□□□ -2.59
UPK1AO00322 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.15□□□□□ -2.59
UPK1AO00322 RNA5SP192-201ENST00000364404 120 ntBASIC-1.15□□□□□ -2.59
UPK1AO00322 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.15□□□□□ -2.59
UPK1AO00322 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.15□□□□□ -2.59
UPK1AO00322 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.15□□□□□ -2.59
UPK1AO00322 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.15□□□□□ -2.59
UPK1AO00322 MIR3115-201ENST00000577915 68 ntBASIC-1.15□□□□□ -2.59
UPK1AO00322 MIR3165-201ENST00000579874 75 ntBASIC-1.15□□□□□ -2.59
UPK1AO00322 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.16□□□□□ -2.6
UPK1AO00322 RNU6-363P-201ENST00000362895 105 ntBASIC-1.16□□□□□ -2.6
UPK1AO00322 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.16□□□□□ -2.6
UPK1AO00322 SNORD74.6-201ENST00000364796 70 ntBASIC-1.16□□□□□ -2.6
UPK1AO00322 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.16□□□□□ -2.6
UPK1AO00322 MIR582-201ENST00000365731 98 ntBASIC-1.16□□□□□ -2.6
UPK1AO00322 MIR587-201ENST00000384845 96 ntBASIC-1.16□□□□□ -2.6
UPK1AO00322 MIR517B-201ENST00000385102 67 ntBASIC-1.16□□□□□ -2.6
UPK1AO00322 U3.27-201ENST00000391237 200 ntBASIC-1.16□□□□□ -2.6
UPK1AO00322 MIR548F4-201ENST00000408515 105 ntBASIC-1.16□□□□□ -2.6
UPK1AO00322 AP000533.3-201ENST00000447704 118 ntBASIC-1.16□□□□□ -2.6
UPK1AO00322 RNU6-1018P-201ENST00000516577 106 ntBASIC-1.16□□□□□ -2.6
UPK1AO00322 RNU6-235P-201ENST00000362644 107 ntBASIC-1.17□□□□□ -2.6
UPK1AO00322 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.17□□□□□ -2.6
UPK1AO00322 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.17□□□□□ -2.6
UPK1AO00322 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.17□□□□□ -2.6
UPK1AO00322 RNU6-409P-201ENST00000384114 104 ntBASIC-1.17□□□□□ -2.6
UPK1AO00322 RNU6-476P-201ENST00000384726 107 ntBASIC-1.17□□□□□ -2.6
UPK1AO00322 SNORD64-201ENST00000386683 67 ntBASIC-1.17□□□□□ -2.6
UPK1AO00322 AP002392.1-201ENST00000537692 208 ntBASIC-1.17□□□□□ -2.6
UPK1AO00322 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.18□□□□□ -2.6
UPK1AO00322 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.18□□□□□ -2.6
UPK1AO00322 RNU6-431P-201ENST00000383874 107 ntBASIC-1.18□□□□□ -2.6
UPK1AO00322 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.18□□□□□ -2.6
UPK1AO00322 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.18□□□□□ -2.6
UPK1AO00322 RNU7-121P-201ENST00000516604 62 ntBASIC-1.18□□□□□ -2.6
UPK1AO00322 MIR4306-201ENST00000583390 91 ntBASIC-1.18□□□□□ -2.6
UPK1AO00322 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.19□□□□□ -2.6
UPK1AO00322 MIR548D2-201ENST00000384955 97 ntBASIC-1.19□□□□□ -2.6
UPK1AO00322 MIR1263-201ENST00000408324 86 ntBASIC-1.19□□□□□ -2.6
UPK1AO00322 RNA5SP136-201ENST00000410906 107 ntBASIC-1.19□□□□□ -2.6
UPK1AO00322 AC097510.1-201ENST00000510945 133 ntBASIC-1.19□□□□□ -2.6
UPK1AO00322 RNA5SP67-201ENST00000516422 131 ntBASIC-1.19□□□□□ -2.6
UPK1AO00322 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.19□□□□□ -2.6
UPK1AO00322 AL117187.1-201ENST00000555482 181 ntBASIC-1.19□□□□□ -2.6
UPK1AO00322 AC130289.1-201ENST00000577321 73 ntBASIC-1.19□□□□□ -2.6
UPK1AO00322 MIR3121-201ENST00000579680 77 ntBASIC-1.19□□□□□ -2.6
UPK1AO00322 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.2□□□□□ -2.6
UPK1AO00322 RNY4P3-201ENST00000365254 95 ntBASIC-1.2□□□□□ -2.6
UPK1AO00322 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.2□□□□□ -2.6
UPK1AO00322 RNA5SP395-201ENST00000516567 118 ntBASIC-1.2□□□□□ -2.6
UPK1AO00322 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.21□□□□□ -2.6
UPK1AO00322 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.21□□□□□ -2.6
UPK1AO00322 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.21□□□□□ -2.6
UPK1AO00322 snoU13.19-201ENST00000459148 104 ntBASIC-1.21□□□□□ -2.6
UPK1AO00322 AL442128.1-201ENST00000615151 90 ntBASIC-1.21□□□□□ -2.6
UPK1AO00322 SNORA20.1-201ENST00000364790 130 ntBASIC-1.22□□□□□ -2.6
UPK1AO00322 RNU6-915P-201ENST00000364943 103 ntBASIC-1.22□□□□□ -2.6
UPK1AO00322 RNU6-30P-201ENST00000384561 107 ntBASIC-1.22□□□□□ -2.6
UPK1AO00322 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.22□□□□□ -2.6
UPK1AO00322 SNORD57-201ENST00000448188 72 ntBASIC-1.22□□□□□ -2.6
UPK1AO00322 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.22□□□□□ -2.6
UPK1AO00322 MIR3128-201ENST00000581957 66 ntBASIC-1.22□□□□□ -2.6
UPK1AO00322 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.22□□□□□ -2.6
UPK1AO00322 MIR382-201ENST00000637119 76 ntBASIC-1.22□□□□□ -2.6
UPK1AO00322 RNU4-32P-201ENST00000363404 141 ntBASIC-1.23□□□□□ -2.61
UPK1AO00322 RNU6-647P-201ENST00000364243 107 ntBASIC-1.23□□□□□ -2.61
UPK1AO00322 RNU6-65P-201ENST00000516332 98 ntBASIC-1.23□□□□□ -2.61
UPK1AO00322 AC022559.1-201ENST00000520905 205 ntBASIC-1.23□□□□□ -2.61
UPK1AO00322 AC008737.2-201ENST00000599446 118 ntBASIC-1.23□□□□□ -2.61
UPK1AO00322 MIR8068-201ENST00000618032 68 ntBASIC-1.23□□□□□ -2.61
UPK1AO00322 RNU6-867P-201ENST00000364956 107 ntBASIC-1.24□□□□□ -2.61
UPK1AO00322 RNU4-11P-201ENST00000365287 132 ntBASIC-1.24□□□□□ -2.61
UPK1AO00322 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.24□□□□□ -2.61
UPK1AO00322 MIR1302-3-201ENST00000408128 138 ntBASIC-1.24□□□□□ -2.61
UPK1AO00322 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.24□□□□□ -2.61
UPK1AO00322 SNORD42B-201ENST00000458893 67 ntBASIC-1.24□□□□□ -2.61
UPK1AO00322 SNORD18.2-201ENST00000459604 70 ntBASIC-1.24□□□□□ -2.61
UPK1AO00322 FGF7P7-201ENST00000514120 227 ntBASIC-1.24□□□□□ -2.61
UPK1AO00322 RNU6-719P-201ENST00000516671 104 ntBASIC-1.24□□□□□ -2.61
UPK1AO00322 RNY1P9-201ENST00000532431 109 ntBASIC-1.24□□□□□ -2.61
UPK1AO00322 MIR6773-201ENST00000612812 74 ntBASIC-1.24□□□□□ -2.61
UPK1AO00322 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.25□□□□□ -2.61
UPK1AO00322 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.25□□□□□ -2.61
UPK1AO00322 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.25□□□□□ -2.61
UPK1AO00322 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.25□□□□□ -2.61
UPK1AO00322 RNU6-111P-201ENST00000517179 105 ntBASIC-1.25□□□□□ -2.61
UPK1AO00322 RNU6-706P-201ENST00000517229 104 ntBASIC-1.25□□□□□ -2.61
UPK1AO00322 MIR4536-1-201ENST00000583537 88 ntBASIC-1.25□□□□□ -2.61
UPK1AO00322 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.26□□□□□ -2.61
UPK1AO00322 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.26□□□□□ -2.61
UPK1AO00322 SNORA63.6-201ENST00000364921 119 ntBASIC-1.26□□□□□ -2.61
UPK1AO00322 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.26□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms