Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 RNU6-762P-201ENST00000517107 102 ntBASIC-1.08□□□□□ -2.58
SMKR1H3BMG3 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.09□□□□□ -2.58
SMKR1H3BMG3 RNU6-54P-201ENST00000365563 107 ntBASIC-1.09□□□□□ -2.58
SMKR1H3BMG3 MIR582-201ENST00000365731 98 ntBASIC-1.09□□□□□ -2.58
SMKR1H3BMG3 MIR451A-201ENST00000385059 72 ntBASIC-1.09□□□□□ -2.58
SMKR1H3BMG3 MT-TQ-201ENST00000387372 72 ntBASIC-1.09□□□□□ -2.58
SMKR1H3BMG3 RNU6-460P-201ENST00000391158 108 ntBASIC-1.09□□□□□ -2.58
SMKR1H3BMG3 MIR548E-201ENST00000408287 88 ntBASIC-1.09□□□□□ -2.58
SMKR1H3BMG3 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.09□□□□□ -2.58
SMKR1H3BMG3 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.09□□□□□ -2.58
SMKR1H3BMG3 AL442128.1-201ENST00000615151 90 ntBASIC-1.09□□□□□ -2.58
SMKR1H3BMG3 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.1□□□□□ -2.59
SMKR1H3BMG3 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.1□□□□□ -2.59
SMKR1H3BMG3 SNORD75.1-201ENST00000408373 60 ntBASIC-1.1□□□□□ -2.59
SMKR1H3BMG3 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.1□□□□□ -2.59
SMKR1H3BMG3 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.1□□□□□ -2.59
SMKR1H3BMG3 MIR3179-1-201ENST00000578940 84 ntBASIC-1.1□□□□□ -2.59
SMKR1H3BMG3 MIR3179-2-201ENST00000579107 84 ntBASIC-1.1□□□□□ -2.59
SMKR1H3BMG3 MIR5589-201ENST00000579442 60 ntBASIC-1.1□□□□□ -2.59
SMKR1H3BMG3 MIR3179-3-201ENST00000579566 84 ntBASIC-1.1□□□□□ -2.59
SMKR1H3BMG3 MIR3179-4-201ENST00000617599 84 ntBASIC-1.1□□□□□ -2.59
SMKR1H3BMG3 AC141273.2-201ENST00000618989 130 ntBASIC-1.1□□□□□ -2.59
SMKR1H3BMG3 MTND5P18-201ENST00000445624 1801 ntBASIC-1.1□□□□□ -2.59
SMKR1H3BMG3 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.11□□□□□ -2.59
SMKR1H3BMG3 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.11□□□□□ -2.59
SMKR1H3BMG3 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.11□□□□□ -2.59
SMKR1H3BMG3 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.12□□□□□ -2.59
SMKR1H3BMG3 RNU6-1184P-201ENST00000384588 108 ntBASIC-1.12□□□□□ -2.59
SMKR1H3BMG3 RNU6-476P-201ENST00000384726 107 ntBASIC-1.12□□□□□ -2.59
SMKR1H3BMG3 MIR6779-201ENST00000617283 64 ntBASIC-1.12□□□□□ -2.59
SMKR1H3BMG3 RNY4P6-201ENST00000363667 96 ntBASIC-1.13□□□□□ -2.59
SMKR1H3BMG3 RNU4-36P-201ENST00000364294 144 ntBASIC-1.13□□□□□ -2.59
SMKR1H3BMG3 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.13□□□□□ -2.59
SMKR1H3BMG3 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.13□□□□□ -2.59
SMKR1H3BMG3 MIR1912-201ENST00000410389 80 ntBASIC-1.13□□□□□ -2.59
SMKR1H3BMG3 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.13□□□□□ -2.59
SMKR1H3BMG3 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-1.13□□□□□ -2.59
SMKR1H3BMG3 RNU6-151P-201ENST00000364158 107 ntBASIC-1.14□□□□□ -2.59
SMKR1H3BMG3 RNU6-721P-201ENST00000410155 105 ntBASIC-1.14□□□□□ -2.59
SMKR1H3BMG3 AC097510.1-201ENST00000510945 133 ntBASIC-1.14□□□□□ -2.59
SMKR1H3BMG3 AP001328.1-201ENST00000528550 176 ntBASIC-1.14□□□□□ -2.59
SMKR1H3BMG3 MIR6854-201ENST00000614935 69 ntBASIC-1.14□□□□□ -2.59
SMKR1H3BMG3 AP001340.1-201ENST00000624405 217 ntBASIC-1.14□□□□□ -2.59
SMKR1H3BMG3 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.15□□□□□ -2.59
SMKR1H3BMG3 MIR604-201ENST00000384880 94 ntBASIC-1.15□□□□□ -2.59
SMKR1H3BMG3 MIR513C-201ENST00000401352 84 ntBASIC-1.15□□□□□ -2.59
SMKR1H3BMG3 SNORD42B-201ENST00000458893 67 ntBASIC-1.15□□□□□ -2.59
SMKR1H3BMG3 RNU6-75P-201ENST00000515944 104 ntBASIC-1.15□□□□□ -2.59
SMKR1H3BMG3 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.15□□□□□ -2.59
SMKR1H3BMG3 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.15□□□□□ -2.59
SMKR1H3BMG3 SNORD22.1-201ENST00000516331 125 ntBASIC-1.15□□□□□ -2.59
SMKR1H3BMG3 MIR5704-201ENST00000584029 77 ntBASIC-1.15□□□□□ -2.59
SMKR1H3BMG3 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.15□□□□□ -2.59
SMKR1H3BMG3 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.15□□□□□ -2.59
SMKR1H3BMG3 SNORD74.6-201ENST00000364796 70 ntBASIC-1.16□□□□□ -2.6
SMKR1H3BMG3 RNU6-816P-201ENST00000390914 107 ntBASIC-1.16□□□□□ -2.6
SMKR1H3BMG3 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.16□□□□□ -2.6
SMKR1H3BMG3 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.16□□□□□ -2.6
SMKR1H3BMG3 AL118496.2-201ENST00000448300 230 ntBASIC-1.16□□□□□ -2.6
SMKR1H3BMG3 SNORA81.3-201ENST00000517283 198 ntBASIC-1.16□□□□□ -2.6
SMKR1H3BMG3 MIR4636-201ENST00000582271 80 ntBASIC-1.16□□□□□ -2.6
SMKR1H3BMG3 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.17□□□□□ -2.6
SMKR1H3BMG3 AL158147.1-201ENST00000443970 75 ntBASIC-1.17□□□□□ -2.6
SMKR1H3BMG3 RNU6-65P-201ENST00000516332 98 ntBASIC-1.17□□□□□ -2.6
SMKR1H3BMG3 RNU6-861P-201ENST00000516745 106 ntBASIC-1.17□□□□□ -2.6
SMKR1H3BMG3 MIR4536-1-201ENST00000583537 88 ntBASIC-1.17□□□□□ -2.6
SMKR1H3BMG3 snoR1.1-201ENST00000628177 80 ntBASIC-1.17□□□□□ -2.6
SMKR1H3BMG3 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.18□□□□□ -2.6
SMKR1H3BMG3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.18□□□□□ -2.6
SMKR1H3BMG3 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.19□□□□□ -2.6
SMKR1H3BMG3 RNU7-120P-201ENST00000459334 63 ntBASIC-1.19□□□□□ -2.6
SMKR1H3BMG3 AC022137.1-201ENST00000483735 151 ntBASIC-1.19□□□□□ -2.6
SMKR1H3BMG3 RNU6-781P-201ENST00000516377 101 ntBASIC-1.19□□□□□ -2.6
SMKR1H3BMG3 RNU6-719P-201ENST00000516671 104 ntBASIC-1.19□□□□□ -2.6
SMKR1H3BMG3 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.2□□□□□ -2.6
SMKR1H3BMG3 Y_RNA.170-201ENST00000363746 110 ntBASIC-1.2□□□□□ -2.6
SMKR1H3BMG3 Y_RNA.552-201ENST00000384665 112 ntBASIC-1.2□□□□□ -2.6
SMKR1H3BMG3 MIR224-201ENST00000384889 81 ntBASIC-1.2□□□□□ -2.6
SMKR1H3BMG3 FGF7P7-201ENST00000514120 227 ntBASIC-1.2□□□□□ -2.6
SMKR1H3BMG3 AC025521.1-201ENST00000621624 286 ntBASIC-1.2□□□□□ -2.6
SMKR1H3BMG3 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.21□□□□□ -2.6
SMKR1H3BMG3 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.21□□□□□ -2.6
SMKR1H3BMG3 SNORD50.2-201ENST00000365465 70 ntBASIC-1.21□□□□□ -2.6
SMKR1H3BMG3 AP000533.3-201ENST00000447704 118 ntBASIC-1.21□□□□□ -2.6
SMKR1H3BMG3 MIR6773-201ENST00000612812 74 ntBASIC-1.21□□□□□ -2.6
SMKR1H3BMG3 MIR8068-201ENST00000618032 68 ntBASIC-1.21□□□□□ -2.6
SMKR1H3BMG3 RNU6-682P-201ENST00000363843 106 ntBASIC-1.22□□□□□ -2.6
SMKR1H3BMG3 MIR517B-201ENST00000385102 67 ntBASIC-1.22□□□□□ -2.6
SMKR1H3BMG3 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.22□□□□□ -2.6
SMKR1H3BMG3 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.22□□□□□ -2.6
SMKR1H3BMG3 RNU6-327P-201ENST00000516270 127 ntBASIC-1.22□□□□□ -2.6
SMKR1H3BMG3 U7.2-201ENST00000607576 63 ntBASIC-1.22□□□□□ -2.6
SMKR1H3BMG3 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.23□□□□□ -2.61
SMKR1H3BMG3 SNORA63.6-201ENST00000364921 119 ntBASIC-1.23□□□□□ -2.61
SMKR1H3BMG3 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.23□□□□□ -2.61
SMKR1H3BMG3 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.23□□□□□ -2.61
SMKR1H3BMG3 MIR4503-201ENST00000582187 83 ntBASIC-1.23□□□□□ -2.61
SMKR1H3BMG3 AC108676.2-201ENST00000605225 163 ntBASIC-1.23□□□□□ -2.61
SMKR1H3BMG3 AC025166.1-201ENST00000612411 163 ntBASIC-1.23□□□□□ -2.61
SMKR1H3BMG3 MIR577-201ENST00000385196 96 ntBASIC-1.24□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 213.4 ms