Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 RNU7-174P-201ENST00000516248 59 ntBASIC2.07□□□□□ -2.08
H3BM21 AP000553.5-201ENST00000641933 54 ntBASIC2.07□□□□□ -2.08
H3BM21 Y_RNA.164-201ENST00000363709 102 ntBASIC2.06□□□□□ -2.08
H3BM21 Y_RNA.250-201ENST00000364542 110 ntBASIC2.06□□□□□ -2.08
H3BM21 SNORD113.3-201ENST00000364630 78 ntBASIC2.06□□□□□ -2.08
H3BM21 Y_RNA.338-201ENST00000365320 114 ntBASIC2.06□□□□□ -2.08
H3BM21 MIR521-2-201ENST00000384818 87 ntBASIC2.06□□□□□ -2.08
H3BM21 RNU7-104P-201ENST00000459398 79 ntBASIC2.06□□□□□ -2.08
H3BM21 RNU7-161P-201ENST00000517289 62 ntBASIC2.06□□□□□ -2.08
H3BM21 MIR4676-201ENST00000583078 72 ntBASIC2.06□□□□□ -2.08
H3BM21 RNA5SP212-201ENST00000391223 107 ntBASIC2.05□□□□□ -2.08
H3BM21 AC021146.9-201ENST00000512503 156 ntBASIC2.05□□□□□ -2.08
H3BM21 RNU6-231P-201ENST00000517122 103 ntBASIC2.05□□□□□ -2.08
H3BM21 U2.7-201ENST00000619197 100 ntBASIC2.05□□□□□ -2.08
H3BM21 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.05□□□□□ -2.08
H3BM21 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.04□□□□□ -2.08
H3BM21 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.04□□□□□ -2.08
H3BM21 AL773524.1-201ENST00000614065 229 ntBASIC2.04□□□□□ -2.08
H3BM21 AC027335.2-201ENST00000624030 375 ntBASIC2.04□□□□□ -2.08
H3BM21 Y_RNA.32-201ENST00000362589 110 ntBASIC2.03□□□□□ -2.08
H3BM21 MIR545-201ENST00000385085 106 ntBASIC2.03□□□□□ -2.08
H3BM21 MIR938-201ENST00000401216 83 ntBASIC2.03□□□□□ -2.08
H3BM21 RPS26P5-201ENST00000418544 335 ntBASIC2.03□□□□□ -2.08
H3BM21 RNU7-102P-201ENST00000458948 62 ntBASIC2.03□□□□□ -2.08
H3BM21 RNU7-40P-201ENST00000516397 64 ntBASIC2.03□□□□□ -2.08
H3BM21 AC036111.3-201ENST00000526389 112 ntBASIC2.03□□□□□ -2.08
H3BM21 MIR5002-201ENST00000584713 97 ntBASIC2.03□□□□□ -2.08
H3BM21 MIR7111-201ENST00000619751 72 ntBASIC2.03□□□□□ -2.08
H3BM21 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
H3BM21 RNA5SP37-201ENST00000365420 130 ntBASIC2.02□□□□□ -2.09
H3BM21 SNORA41B-201ENST00000384785 128 ntBASIC2.02□□□□□ -2.09
H3BM21 RNA5SP338-201ENST00000410495 85 ntBASIC2.02□□□□□ -2.09
H3BM21 snoU13.13-201ENST00000458842 104 ntBASIC2.02□□□□□ -2.09
H3BM21 RNA5SP233-201ENST00000459153 113 ntBASIC2.02□□□□□ -2.09
H3BM21 SNORA31.14-201ENST00000516728 116 ntBASIC2.02□□□□□ -2.09
H3BM21 RNU6-295P-201ENST00000516901 104 ntBASIC2.02□□□□□ -2.09
H3BM21 MIR3664-201ENST00000579074 99 ntBASIC2.02□□□□□ -2.09
H3BM21 MIR583-201ENST00000384846 75 ntBASIC2.01□□□□□ -2.09
H3BM21 RNU6-717P-201ENST00000459076 104 ntBASIC2.01□□□□□ -2.09
H3BM21 MIR4299-201ENST00000577899 72 ntBASIC2.01□□□□□ -2.09
H3BM21 MIR4448-201ENST00000584360 86 ntBASIC2.01□□□□□ -2.09
H3BM21 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2□□□□□ -2.09
H3BM21 Y_RNA.226-201ENST00000364337 114 ntBASIC2□□□□□ -2.09
H3BM21 MIR676-201ENST00000390702 67 ntBASIC2□□□□□ -2.09
H3BM21 SNORD116.2-201ENST00000391251 93 ntBASIC2□□□□□ -2.09
H3BM21 RNU1-123P-201ENST00000458950 160 ntBASIC2□□□□□ -2.09
H3BM21 TP73-AS1.1-201ENST00000611447 161 ntBASIC2□□□□□ -2.09
H3BM21 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
H3BM21 RNU1-40P-201ENST00000516816 164 ntBASIC1.99□□□□□ -2.09
H3BM21 RNU1-97P-201ENST00000516872 164 ntBASIC1.99□□□□□ -2.09
H3BM21 SNORA77B-201ENST00000578179 125 ntBASIC1.99□□□□□ -2.09
H3BM21 Y_RNA.783-201ENST00000613546 102 ntBASIC1.99□□□□□ -2.09
H3BM21 uc_338.16-201ENST00000621804 95 ntBASIC1.99□□□□□ -2.09
H3BM21 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
H3BM21 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
H3BM21 SNORA26.9-201ENST00000391322 122 ntBASIC1.98□□□□□ -2.09
H3BM21 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.98□□□□□ -2.09
H3BM21 RNA5SP182-201ENST00000516064 82 ntBASIC1.98□□□□□ -2.09
H3BM21 SNORA40.16-201ENST00000517238 121 ntBASIC1.98□□□□□ -2.09
H3BM21 MIR548X-201ENST00000580069 75 ntBASIC1.98□□□□□ -2.09
H3BM21 AC067863.3-201ENST00000624172 122 ntBASIC1.98□□□□□ -2.09
H3BM21 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
H3BM21 Y_RNA.174-201ENST00000363781 105 ntBASIC1.97□□□□□ -2.09
H3BM21 RNA5SP160-201ENST00000364866 120 ntBASIC1.97□□□□□ -2.09
H3BM21 AC019176.1-201ENST00000518519 225 ntBASIC1.97□□□□□ -2.09
H3BM21 MIR4713-201ENST00000582691 75 ntBASIC1.97□□□□□ -2.09
H3BM21 AL096840.1-201ENST00000603287 93 ntBASIC1.97□□□□□ -2.09
H3BM21 RNU6-838P-201ENST00000363399 108 ntBASIC1.96□□□□□ -2.1
H3BM21 Y_RNA.325-201ENST00000365171 122 ntBASIC1.96□□□□□ -2.1
H3BM21 MT-TY-201ENST00000387409 66 ntBASIC1.96□□□□□ -2.1
H3BM21 RNU7-74P-201ENST00000459104 62 ntBASIC1.96□□□□□ -2.1
H3BM21 RNA5SP364-201ENST00000516938 78 ntBASIC1.96□□□□□ -2.1
H3BM21 MIR4460-201ENST00000577862 86 ntBASIC1.96□□□□□ -2.1
H3BM21 uc_338.20-201ENST00000621563 178 ntBASIC1.96□□□□□ -2.1
H3BM21 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
H3BM21 SNORD114-4-201ENST00000363962 75 ntBASIC1.95□□□□□ -2.1
H3BM21 Y_RNA.246-201ENST00000364495 108 ntBASIC1.95□□□□□ -2.1
H3BM21 SNORD111-201ENST00000408139 94 ntBASIC1.95□□□□□ -2.1
H3BM21 MIR4498-201ENST00000577599 66 ntBASIC1.95□□□□□ -2.1
H3BM21 MIR4804-201ENST00000581683 73 ntBASIC1.95□□□□□ -2.1
H3BM21 AL157834.3-201ENST00000615543 103 ntBASIC1.95□□□□□ -2.1
H3BM21 MIR8063-201ENST00000621930 81 ntBASIC1.95□□□□□ -2.1
H3BM21 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.94□□□□□ -2.1
H3BM21 Y_RNA.125-201ENST00000363371 111 ntBASIC1.94□□□□□ -2.1
H3BM21 SNORA33.1-201ENST00000364957 130 ntBASIC1.94□□□□□ -2.1
H3BM21 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
H3BM21 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
H3BM21 RNU1-119P-201ENST00000391122 165 ntBASIC1.94□□□□□ -2.1
H3BM21 RNU6-1053P-201ENST00000515930 101 ntBASIC1.94□□□□□ -2.1
H3BM21 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.94□□□□□ -2.1
H3BM21 AC023827.1-201ENST00000569247 97 ntBASIC1.94□□□□□ -2.1
H3BM21 MIR6845-201ENST00000613182 61 ntBASIC1.94□□□□□ -2.1
H3BM21 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
H3BM21 RNU1-17P-201ENST00000363022 152 ntBASIC1.93□□□□□ -2.1
H3BM21 SNORA15B-2-201ENST00000384058 135 ntBASIC1.93□□□□□ -2.1
H3BM21 SNORA15B-1-201ENST00000384334 135 ntBASIC1.93□□□□□ -2.1
H3BM21 SNORA75.2-201ENST00000391138 150 ntBASIC1.93□□□□□ -2.1
H3BM21 SNORA75.3-201ENST00000391231 150 ntBASIC1.93□□□□□ -2.1
H3BM21 MIR1287-201ENST00000408492 90 ntBASIC1.93□□□□□ -2.1
H3BM21 RNU7-56P-201ENST00000458744 62 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms