Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 MIR6086-201ENST00000638065 55 ntBASIC-0.39□□□□□ -2.47
NPIPA2E9PIF3 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.4□□□□□ -2.47
NPIPA2E9PIF3 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.4□□□□□ -2.47
NPIPA2E9PIF3 MT-TY-201ENST00000387409 66 ntBASIC-0.4□□□□□ -2.47
NPIPA2E9PIF3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.4□□□□□ -2.47
NPIPA2E9PIF3 RNA5SP476-201ENST00000516613 103 ntBASIC-0.4□□□□□ -2.47
NPIPA2E9PIF3 MTND5P18-201ENST00000445624 1801 ntBASIC-0.41□□□□□ -2.47
NPIPA2E9PIF3 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.41□□□□□ -2.48
NPIPA2E9PIF3 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.41□□□□□ -2.48
NPIPA2E9PIF3 RNU6-154P-201ENST00000384306 106 ntBASIC-0.41□□□□□ -2.48
NPIPA2E9PIF3 RNU6-886P-201ENST00000384319 105 ntBASIC-0.41□□□□□ -2.48
NPIPA2E9PIF3 RNU6-816P-201ENST00000390914 107 ntBASIC-0.41□□□□□ -2.48
NPIPA2E9PIF3 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.41□□□□□ -2.48
NPIPA2E9PIF3 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.41□□□□□ -2.48
NPIPA2E9PIF3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.41□□□□□ -2.48
NPIPA2E9PIF3 MIR6507-201ENST00000613630 70 ntBASIC-0.41□□□□□ -2.48
NPIPA2E9PIF3 AL442128.1-201ENST00000615151 90 ntBASIC-0.41□□□□□ -2.48
NPIPA2E9PIF3 FTX_2.1-201ENST00000618816 94 ntBASIC-0.41□□□□□ -2.48
NPIPA2E9PIF3 SNORD58C-201ENST00000365223 64 ntBASIC-0.42□□□□□ -2.48
NPIPA2E9PIF3 RNU6-466P-201ENST00000391224 103 ntBASIC-0.42□□□□□ -2.48
NPIPA2E9PIF3 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.42□□□□□ -2.48
NPIPA2E9PIF3 SNORA32.3-201ENST00000384772 121 ntBASIC-0.43□□□□□ -2.48
NPIPA2E9PIF3 AC007012.1-201ENST00000567192 175 ntBASIC-0.43□□□□□ -2.48
NPIPA2E9PIF3 MIR4788-201ENST00000639104 80 ntBASIC-0.43□□□□□ -2.48
NPIPA2E9PIF3 MIR655-201ENST00000362159 97 ntBASIC-0.44□□□□□ -2.48
NPIPA2E9PIF3 RNA5SP205-201ENST00000364653 136 ntBASIC-0.44□□□□□ -2.48
NPIPA2E9PIF3 SNORD14C-201ENST00000365382 88 ntBASIC-0.44□□□□□ -2.48
NPIPA2E9PIF3 MIR539-201ENST00000365690 78 ntBASIC-0.44□□□□□ -2.48
NPIPA2E9PIF3 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.44□□□□□ -2.48
NPIPA2E9PIF3 MIR216B-201ENST00000390186 82 ntBASIC-0.44□□□□□ -2.48
NPIPA2E9PIF3 AL078595.1-201ENST00000404458 226 ntBASIC-0.44□□□□□ -2.48
NPIPA2E9PIF3 SNORD101-201ENST00000384027 73 ntBASIC-0.45□□□□□ -2.48
NPIPA2E9PIF3 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.45□□□□□ -2.48
NPIPA2E9PIF3 MTND4LP9-201ENST00000427694 174 ntBASIC-0.45□□□□□ -2.48
NPIPA2E9PIF3 snoU13.11-201ENST00000459219 104 ntBASIC-0.45□□□□□ -2.48
NPIPA2E9PIF3 RNU6-175P-201ENST00000516896 107 ntBASIC-0.45□□□□□ -2.48
NPIPA2E9PIF3 MIR548AZ-201ENST00000616567 95 ntBASIC-0.45□□□□□ -2.48
NPIPA2E9PIF3 MIR101-1-201ENST00000362265 75 ntBASIC-0.46□□□□□ -2.48
NPIPA2E9PIF3 RNA5SP368-201ENST00000364298 116 ntBASIC-0.46□□□□□ -2.48
NPIPA2E9PIF3 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.46□□□□□ -2.48
NPIPA2E9PIF3 MIR20A-201ENST00000362279 71 ntBASIC-0.47□□□□□ -2.48
NPIPA2E9PIF3 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.47□□□□□ -2.48
NPIPA2E9PIF3 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.47□□□□□ -2.48
NPIPA2E9PIF3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.47□□□□□ -2.48
NPIPA2E9PIF3 MIR4696-201ENST00000581431 70 ntBASIC-0.47□□□□□ -2.48
NPIPA2E9PIF3 RNU6-664P-201ENST00000362381 107 ntBASIC-0.48□□□□□ -2.49
NPIPA2E9PIF3 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.48□□□□□ -2.49
NPIPA2E9PIF3 Y_RNA.283-201ENST00000364798 112 ntBASIC-0.48□□□□□ -2.49
NPIPA2E9PIF3 RNU6-480P-201ENST00000384332 107 ntBASIC-0.48□□□□□ -2.49
NPIPA2E9PIF3 snosnR66.1-201ENST00000391095 99 ntBASIC-0.48□□□□□ -2.49
NPIPA2E9PIF3 SNORD75.1-201ENST00000408373 60 ntBASIC-0.48□□□□□ -2.49
NPIPA2E9PIF3 RNU6-935P-201ENST00000410371 100 ntBASIC-0.48□□□□□ -2.49
NPIPA2E9PIF3 RNA5SP451-201ENST00000410588 110 ntBASIC-0.48□□□□□ -2.49
NPIPA2E9PIF3 SNORD126-201ENST00000459475 77 ntBASIC-0.48□□□□□ -2.49
NPIPA2E9PIF3 HAR1A.1-201ENST00000459583 118 ntBASIC-0.48□□□□□ -2.49
NPIPA2E9PIF3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.48□□□□□ -2.49
NPIPA2E9PIF3 AC096720.1-201ENST00000604441 183 ntBASIC-0.48□□□□□ -2.49
NPIPA2E9PIF3 AC090425.1-201ENST00000610007 140 ntBASIC-0.48□□□□□ -2.49
NPIPA2E9PIF3 AL590491.3-201ENST00000610731 82 ntBASIC-0.48□□□□□ -2.49
NPIPA2E9PIF3 uc_338.36-201ENST00000622331 158 ntBASIC-0.48□□□□□ -2.49
NPIPA2E9PIF3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.48□□□□□ -2.49
NPIPA2E9PIF3 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.49□□□□□ -2.49
NPIPA2E9PIF3 MIR604-201ENST00000384880 94 ntBASIC-0.49□□□□□ -2.49
NPIPA2E9PIF3 Z95118.1-201ENST00000421372 247 ntBASIC-0.49□□□□□ -2.49
NPIPA2E9PIF3 AC244090.1-201ENST00000441884 93 ntBASIC-0.49□□□□□ -2.49
NPIPA2E9PIF3 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.49□□□□□ -2.49
NPIPA2E9PIF3 RNU6-758P-201ENST00000516292 89 ntBASIC-0.49□□□□□ -2.49
NPIPA2E9PIF3 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.5□□□□□ -2.49
NPIPA2E9PIF3 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.5□□□□□ -2.49
NPIPA2E9PIF3 RNU6-455P-201ENST00000384681 107 ntBASIC-0.5□□□□□ -2.49
NPIPA2E9PIF3 MIR652-201ENST00000385278 98 ntBASIC-0.5□□□□□ -2.49
NPIPA2E9PIF3 SNORA40-201ENST00000388090 126 ntBASIC-0.5□□□□□ -2.49
NPIPA2E9PIF3 RPS29P8-201ENST00000445109 171 ntBASIC-0.5□□□□□ -2.49
NPIPA2E9PIF3 RNU6-772P-201ENST00000516042 105 ntBASIC-0.5□□□□□ -2.49
NPIPA2E9PIF3 RNU7-200P-201ENST00000516105 62 ntBASIC-0.5□□□□□ -2.49
NPIPA2E9PIF3 MIR548O2-201ENST00000616090 70 ntBASIC-0.5□□□□□ -2.49
NPIPA2E9PIF3 AL157777.2-201ENST00000258070 137 ntBASIC-0.51□□□□□ -2.49
NPIPA2E9PIF3 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.51□□□□□ -2.49
NPIPA2E9PIF3 SNORD114-11-201ENST00000363738 75 ntBASIC-0.51□□□□□ -2.49
NPIPA2E9PIF3 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.51□□□□□ -2.49
NPIPA2E9PIF3 MIR224-201ENST00000384889 81 ntBASIC-0.51□□□□□ -2.49
NPIPA2E9PIF3 MIR577-201ENST00000385196 96 ntBASIC-0.51□□□□□ -2.49
NPIPA2E9PIF3 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.51□□□□□ -2.49
NPIPA2E9PIF3 RNU6-86P-201ENST00000606534 107 ntBASIC-0.51□□□□□ -2.49
NPIPA2E9PIF3 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.52□□□□□ -2.49
NPIPA2E9PIF3 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.52□□□□□ -2.49
NPIPA2E9PIF3 MIR196A2-201ENST00000385189 110 ntBASIC-0.52□□□□□ -2.49
NPIPA2E9PIF3 RNU6-257P-201ENST00000410238 98 ntBASIC-0.52□□□□□ -2.49
NPIPA2E9PIF3 RNU6-346P-201ENST00000516288 111 ntBASIC-0.52□□□□□ -2.49
NPIPA2E9PIF3 MIR4694-201ENST00000578534 80 ntBASIC-0.52□□□□□ -2.49
NPIPA2E9PIF3 AL035470.1-201ENST00000622571 220 ntBASIC-0.52□□□□□ -2.49
NPIPA2E9PIF3 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.53□□□□□ -2.49
NPIPA2E9PIF3 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.53□□□□□ -2.49
NPIPA2E9PIF3 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
NPIPA2E9PIF3 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.53□□□□□ -2.49
NPIPA2E9PIF3 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.53□□□□□ -2.49
NPIPA2E9PIF3 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.53□□□□□ -2.49
NPIPA2E9PIF3 RNA5SP66-201ENST00000517178 101 ntBASIC-0.53□□□□□ -2.49
NPIPA2E9PIF3 MIR4432-201ENST00000581823 84 ntBASIC-0.53□□□□□ -2.49
NPIPA2E9PIF3 AC025521.1-201ENST00000621624 286 ntBASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 197.2 ms