Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RNF223E7ERA6 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RNF223E7ERA6 RNA5SP456-201ENST00000364002 114 ntBASIC1.99□□□□□ -2.09
RNF223E7ERA6 SNORA15B-2-201ENST00000384058 135 ntBASIC1.99□□□□□ -2.09
RNF223E7ERA6 SNORA15B-1-201ENST00000384334 135 ntBASIC1.99□□□□□ -2.09
RNF223E7ERA6 RNU6-548P-201ENST00000517083 115 ntBASIC1.99□□□□□ -2.09
RNF223E7ERA6 MIR4639-201ENST00000584938 69 ntBASIC1.99□□□□□ -2.09
RNF223E7ERA6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.99□□□□□ -2.09
RNF223E7ERA6 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.99□□□□□ -2.09
RNF223E7ERA6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RNF223E7ERA6 SNORA7.1-201ENST00000363750 139 ntBASIC1.98□□□□□ -2.09
RNF223E7ERA6 MIR1291-201ENST00000627649 87 ntBASIC1.98□□□□□ -2.09
RNF223E7ERA6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
RNF223E7ERA6 RNU1-141P-201ENST00000364623 158 ntBASIC1.97□□□□□ -2.09
RNF223E7ERA6 RNU6-35P-201ENST00000384530 107 ntBASIC1.97□□□□□ -2.09
RNF223E7ERA6 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
RNF223E7ERA6 MIR3670-2-201ENST00000582974 65 ntBASIC1.97□□□□□ -2.09
RNF223E7ERA6 MIR5092-201ENST00000583139 88 ntBASIC1.97□□□□□ -2.09
RNF223E7ERA6 MIR3670-1-201ENST00000584160 65 ntBASIC1.97□□□□□ -2.09
RNF223E7ERA6 MIR3670-3-201ENST00000584855 65 ntBASIC1.97□□□□□ -2.09
RNF223E7ERA6 MIR3670-4-201ENST00000612260 65 ntBASIC1.97□□□□□ -2.09
RNF223E7ERA6 AC244669.1-204ENST00000621564 178 ntBASIC1.97□□□□□ -2.09
RNF223E7ERA6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
RNF223E7ERA6 SNORD28-201ENST00000384706 75 ntBASIC1.96□□□□□ -2.1
RNF223E7ERA6 MIR644A-201ENST00000385262 94 ntBASIC1.96□□□□□ -2.1
RNF223E7ERA6 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.96□□□□□ -2.1
RNF223E7ERA6 MIR548L-201ENST00000408303 86 ntBASIC1.96□□□□□ -2.1
RNF223E7ERA6 MIR1827-201ENST00000408549 66 ntBASIC1.96□□□□□ -2.1
RNF223E7ERA6 RMST_2.1-201ENST00000617263 136 ntBASIC1.96□□□□□ -2.1
RNF223E7ERA6 AL353997.5-201ENST00000618886 171 ntBASIC1.96□□□□□ -2.1
RNF223E7ERA6 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.96□□□□□ -2.1
RNF223E7ERA6 Z82195.2-201ENST00000612348 18351 ntBASIC1.96□□□□□ -2.1
RNF223E7ERA6 Y_RNA.125-201ENST00000363371 111 ntBASIC1.95□□□□□ -2.1
RNF223E7ERA6 Y_RNA.633-201ENST00000459107 95 ntBASIC1.95□□□□□ -2.1
RNF223E7ERA6 AC002350.1-201ENST00000490759 375 ntBASIC1.95□□□□□ -2.1
RNF223E7ERA6 RNU6-231P-201ENST00000517122 103 ntBASIC1.95□□□□□ -2.1
RNF223E7ERA6 RNA5SP402-201ENST00000517148 110 ntBASIC1.95□□□□□ -2.1
RNF223E7ERA6 AC010297.1-201ENST00000623948 149 ntBASIC1.95□□□□□ -2.1
RNF223E7ERA6 RNU4-33P-201ENST00000364316 85 ntBASIC1.94□□□□□ -2.1
RNF223E7ERA6 SNORA41B-201ENST00000384785 128 ntBASIC1.94□□□□□ -2.1
RNF223E7ERA6 RNU6-910P-201ENST00000390844 107 ntBASIC1.94□□□□□ -2.1
RNF223E7ERA6 RNU6-930P-201ENST00000390938 100 ntBASIC1.94□□□□□ -2.1
RNF223E7ERA6 AL603825.1-201ENST00000438481 80 ntBASIC1.94□□□□□ -2.1
RNF223E7ERA6 RNU5B-6P-201ENST00000516765 68 ntBASIC1.94□□□□□ -2.1
RNF223E7ERA6 MIR5194-201ENST00000582634 120 ntBASIC1.94□□□□□ -2.1
RNF223E7ERA6 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.94□□□□□ -2.1
RNF223E7ERA6 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.93□□□□□ -2.1
RNF223E7ERA6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
RNF223E7ERA6 RNU6-726P-201ENST00000364680 107 ntBASIC1.93□□□□□ -2.1
RNF223E7ERA6 SNORA67.1-201ENST00000364749 141 ntBASIC1.93□□□□□ -2.1
RNF223E7ERA6 SNORA33.1-201ENST00000364957 130 ntBASIC1.93□□□□□ -2.1
RNF223E7ERA6 DEFA7P-201ENST00000382676 285 ntBASIC1.93□□□□□ -2.1
RNF223E7ERA6 SNORD79.1-201ENST00000516069 84 ntBASIC1.93□□□□□ -2.1
RNF223E7ERA6 RNA5SP458-201ENST00000516188 119 ntBASIC1.93□□□□□ -2.1
RNF223E7ERA6 Y_RNA.676-201ENST00000516393 96 ntBASIC1.93□□□□□ -2.1
RNF223E7ERA6 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
RNF223E7ERA6 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RNF223E7ERA6 Y_RNA.246-201ENST00000364495 108 ntBASIC1.92□□□□□ -2.1
RNF223E7ERA6 SNORA64-201ENST00000384674 134 ntBASIC1.92□□□□□ -2.1
RNF223E7ERA6 MIR221-201ENST00000385135 110 ntBASIC1.92□□□□□ -2.1
RNF223E7ERA6 RNU6-469P-201ENST00000516253 101 ntBASIC1.92□□□□□ -2.1
RNF223E7ERA6 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.92□□□□□ -2.1
RNF223E7ERA6 MIR6073-201ENST00000352083 89 ntBASIC1.91□□□□□ -2.1
RNF223E7ERA6 MIR758-201ENST00000390227 88 ntBASIC1.91□□□□□ -2.1
RNF223E7ERA6 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.91□□□□□ -2.1
RNF223E7ERA6 SUMO1P4-201ENST00000429430 302 ntBASIC1.91□□□□□ -2.1
RNF223E7ERA6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
RNF223E7ERA6 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
RNF223E7ERA6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
RNF223E7ERA6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RNF223E7ERA6 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RNF223E7ERA6 Y_RNA.325-201ENST00000365171 122 ntBASIC1.9□□□□□ -2.11
RNF223E7ERA6 SNORA8.2-201ENST00000384372 139 ntBASIC1.9□□□□□ -2.11
RNF223E7ERA6 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
RNF223E7ERA6 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.89□□□□□ -2.11
RNF223E7ERA6 MIR5007-201ENST00000583098 95 ntBASIC1.89□□□□□ -2.11
RNF223E7ERA6 AL137847.3-201ENST00000611521 109 ntBASIC1.89□□□□□ -2.11
RNF223E7ERA6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RNF223E7ERA6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RNF223E7ERA6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
RNF223E7ERA6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
RNF223E7ERA6 SNORA63.6-201ENST00000364921 119 ntBASIC1.88□□□□□ -2.11
RNF223E7ERA6 RNU1-78P-201ENST00000391248 165 ntBASIC1.88□□□□□ -2.11
RNF223E7ERA6 RNU6-269P-201ENST00000391077 97 ntBASIC1.87□□□□□ -2.11
RNF223E7ERA6 RNA5SP181-201ENST00000410246 98 ntBASIC1.87□□□□□ -2.11
RNF223E7ERA6 RNA5SP47-201ENST00000517230 109 ntBASIC1.87□□□□□ -2.11
RNF223E7ERA6 MIR3198-2-201ENST00000577868 80 ntBASIC1.87□□□□□ -2.11
RNF223E7ERA6 MIR4781-201ENST00000585250 76 ntBASIC1.87□□□□□ -2.11
RNF223E7ERA6 AC080100.1-201ENST00000624239 5356 ntBASIC1.87□□□□□ -2.11
RNF223E7ERA6 RNU6-716P-201ENST00000365621 103 ntBASIC1.86□□□□□ -2.11
RNF223E7ERA6 MIR517C-201ENST00000385103 95 ntBASIC1.86□□□□□ -2.11
RNF223E7ERA6 SNORD116.2-201ENST00000391251 93 ntBASIC1.86□□□□□ -2.11
RNF223E7ERA6 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.86□□□□□ -2.11
RNF223E7ERA6 MIR548F3-201ENST00000408509 87 ntBASIC1.86□□□□□ -2.11
RNF223E7ERA6 SCARNA17.3-201ENST00000516381 125 ntBASIC1.86□□□□□ -2.11
RNF223E7ERA6 RNU1-40P-201ENST00000516816 164 ntBASIC1.86□□□□□ -2.11
RNF223E7ERA6 RNU1-97P-201ENST00000516872 164 ntBASIC1.86□□□□□ -2.11
RNF223E7ERA6 MIR219B-201ENST00000637023 88 ntBASIC1.86□□□□□ -2.11
RNF223E7ERA6 SNORD18A-201ENST00000363753 72 ntBASIC1.85□□□□□ -2.11
RNF223E7ERA6 SNORA25.8-201ENST00000364831 128 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms